Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 1.3e-49 199.5 106 100.0
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 4.1e-32 141.4 79 91.1
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 7.0e-32 140.6 79 91.1
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 2.0e-31 139.0 83 86.7
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 3.5e-31 138.3 83 86.7
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 1.7e-30 136.0 79 88.6
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 1.7e-30 136.0 83 84.3
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.7e-30 136.0 79 89.9
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 1.7e-30 136.0 83 85.5
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 5.0e-30 134.4 83 84.3
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 4.7e-28 127.9 74 89.2
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 6.8e-27 124.0 95 74.7
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 3.4e-26 121.7 68 91.2
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 7.5e-26 120.6 94 72.3
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 7.5e-26 120.6 100 68.0
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-25 119.8 94 72.3
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 2.2e-25 119.0 100 68.0
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 2.9e-25 118.6 94 71.3
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 2.9e-25 118.6 100 68.0
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 4.9e-25 117.9 94 70.2
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 6.4e-25 117.5 98 66.3
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 8.3e-25 117.1 100 67.0
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 1.4e-24 116.3 94 70.2
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-24 116.3 102 64.7
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 2.4e-24 115.5 94 70.2
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 2.4e-24 115.5 100 68.0
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 3.2e-24 115.2 93 69.9
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 5.4e-24 114.4 99 68.7
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 5.4e-24 114.4 98 65.3
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 5.4e-24 114.4 92 70.7
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-23 112.5 98 66.3
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 2.0e-23 112.5 93 67.7
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 2.7e-23 112.1 87 72.4
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 3.5e-23 111.7 94 67.0
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 3.5e-23 111.7 99 63.6
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 4.6e-23 111.3 99 66.7
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 6.0e-23 110.9 93 66.7
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-22 109.4 96 64.6
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 1.7e-22 109.4 82 69.5
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 2.3e-22 109.0 97 61.9
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.0e-22 108.6 88 69.3
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 3.9e-22 108.2 97 64.9
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 3.9e-22 108.2 94 66.0
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 6.6e-22 107.5 91 67.0
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 6.6e-22 107.5 91 68.1
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 8.6e-22 107.1 97 64.9
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 8.6e-22 107.1 102 61.8
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.1e-21 106.7 87 69.0
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 1.1e-21 106.7 99 61.6
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 1.5e-21 106.3 91 67.0
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 1.5e-21 106.3 92 65.2
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 1.5e-21 106.3 97 60.8
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 1.9e-21 105.9 85 68.2
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 3.3e-21 105.1 100 67.0
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 4.3e-21 104.8 99 59.6
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 5.6e-21 104.4 105 59.0
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 1.2e-20 103.2 70 74.3
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.2e-20 103.2 84 67.9
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 6.2e-20 100.9 94 66.0
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 6.2e-20 100.9 88 63.6
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 8.1e-20 100.5 69 75.4
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 1.1e-19 100.1 89 66.3
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 1.4e-19 99.8 92 65.2
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.4e-19 99.8 90 66.7
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-18 95.9 91 62.6
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 2.0e-18 95.9 91 62.6
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 5.8e-18 94.4 93 62.4
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.7e-17 92.8 96 58.3
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 2.9e-17 92.0 81 61.7
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 3.7e-17 91.7 98 56.1
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 6.4e-17 90.9 84 59.5
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 8.3e-17 90.5 85 60.0
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 1.1e-16 90.1 81 61.7
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 1.1e-16 90.1 81 61.7
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 4.1e-16 88.2 82 62.2
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 7.1e-16 87.4 85 56.5
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 7.1e-16 87.4 81 58.0
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 1.6e-15 86.3 82 62.2
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 6.0e-15 84.3 82 59.8
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.3e-14 83.2 82 59.8
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 2.3e-14 82.4 59 79.7
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 2.3e-14 82.4 85 50.6
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 3.0e-14 82.0 82 58.5
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 3.0e-14 82.0 81 54.3
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 3.9e-14 81.6 73 56.2
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 5.1e-14 81.3 72 56.9
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 5.1e-14 81.3 72 56.9
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 8.6e-14 80.5 72 54.2
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 8.6e-14 80.5 72 54.2
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 8.6e-14 80.5 81 53.1
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 1.1e-13 80.1 73 64.4
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 1.5e-13 79.7 43 95.3
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.5e-13 79.7 93 55.9
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.5e-13 79.0 85 51.8
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 2.5e-13 79.0 73 54.8
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 2.5e-13 79.0 71 66.2
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 5.6e-13 77.8 72 54.2
BcaB01g01371 Brassica carinata HOM05D001498 ORTHO05D091381 9.5e-13 77.0 73 53.4
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 2.1e-12 75.9 71 66.2
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 2.1e-12 75.9 59 76.3
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 2.8e-12 75.5 81 49.4
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 3.6e-12 75.1 64 70.3
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 3.6e-12 75.1 44 88.6
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 1.1e-11 73.6 88 51.1
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 1.8e-11 72.8 59 72.9
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 6.8e-11 70.9 63 58.7
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 6.8e-11 70.9 92 58.7
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 6.8e-11 70.9 72 52.8
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 1.5e-10 69.7 61 57.4
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.0e-10 69.3 83 48.2
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 2.6e-10 68.9 73 64.4
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 2.6e-10 68.9 98 46.9
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 3.4e-10 68.6 84 48.8
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 3.4e-10 68.6 63 61.9
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 1.4e-08 63.2 55 61.8
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 1.9e-08 62.8 55 61.8
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 2.4e-08 62.4 49 71.4
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 7.1e-08 60.8 72 47.2
BcaB05g24509 Brassica carinata HOM05D001379 ORTHO05D001277 9.2e-08 60.5 63 49.2
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 2.1e-07 59.3 49 65.3
C04p09850 Brassica napus HOM05D001498 ORTHO05D101798 4.6e-07 58.2 64 50.0
C07p38510 Brassica napus HOM05D001498 ORTHO05D100413 4.6e-07 58.2 43 65.1
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 1.3e-06 56.6 40 75.0
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 5.1e-06 54.7 72 44.4
BcaB06g26678 Brassica carinata HOM05D001498 ORTHO05D094527 6.6e-06 54.3 50 64.0


User provided reference genes

Program Settings