Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18245 Brassica carinata HOM05D006636 ORTHO05D008266 2.7e-39 164.9 82 100.0
A08p11260 Brassica napus HOM05D006636 ORTHO05D008266 1.9e-37 158.7 82 95.1
BraA08t33120Z Brassica rapa HOM05D006636 ORTHO05D008266 1.9e-37 158.7 82 95.1
BcaC07g37832 Brassica carinata HOM05D006636 ORTHO05D008266 5.6e-37 157.1 82 93.9
BolC8t48218H Brassica oleracea HOM05D006636 ORTHO05D008266 5.6e-37 157.1 82 93.9
Thhalv10026714m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 9.0e-35 149.8 75 98.7
Sp7g12710 Schrenkiella parvula HOM05D006636 ORTHO05D008266 9.0e-35 149.8 75 98.7
CARHR220860 Cardamine hirsuta HOM05D006636 ORTHO05D008266 8.4e-33 143.3 75 94.7
AT4G14615 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 5.4e-32 140.6 75 92.0
Aa31LG9G2720 Aethionema arabicum HOM05D006636 ORTHO05D008266 9.3e-32 139.8 75 89.3
Carub.0007s2759 Capsella rubella HOM05D006636 ORTHO05D008266 1.6e-31 139.0 75 90.7
AL7G41500 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 3.5e-31 137.9 75 90.7
CARHR043050 Cardamine hirsuta HOM05D006636 ORTHO05D008266 3.5e-31 137.9 75 90.7
Thhalv10011910m.g Eutrema salsugineum HOM05D006636 ORTHO05D008266 7.8e-31 136.7 75 90.7
AL1G61120 Arabidopsis lyrata HOM05D006636 ORTHO05D008266 1.0e-30 136.3 75 89.3
FAN12G3161 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.1e-29 132.9 74 86.5
FAN22G1829 Fragaria x ananassa HOM05D006636 ORTHO05D008266 1.1e-29 132.9 74 86.5
Gohir.A02G035000 Gossypium hirsutum HOM05D006636 ORTHO05D008266 3.3e-29 131.3 76 81.6
Gohir.D02G041800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 3.3e-29 131.3 76 81.6
Gorai.005G046200 Gossypium raimondii HOM05D006636 ORTHO05D008266 3.3e-29 131.3 76 81.6
THA.LOC104808586 Tarenaya hassleriana HOM05D006636 ORTHO05D008266 5.6e-29 130.6 75 86.7
Atru.chr4.2290 Acer truncatum HOM05D006636 ORTHO05D008266 7.3e-29 130.2 76 81.6
AT1G52825 Arabidopsis thaliana HOM05D006636 ORTHO05D008266 9.6e-29 129.8 73 87.7
CANSAT80G2460 Cannabis sativa HOM05D006636 ORTHO05D008266 9.6e-29 129.8 75 85.3
Duzib151G1121 Durio zibethinus HOM05D006636 ORTHO05D008266 9.6e-29 129.8 75 82.7
Gohir.D10G147800 Gossypium hirsutum HOM05D006636 ORTHO05D008266 9.6e-29 129.8 76 78.9
Gorai.011G165000 Gossypium raimondii HOM05D006636 ORTHO05D008266 9.6e-29 129.8 76 78.9
Ciclev10006361m.g Citrus clementina HOM05D006636 ORTHO05D008266 1.6e-28 129.0 75 84.0
RcHm_v2.0_Chr4g0388961 Rosa chinensis HOM05D006636 ORTHO05D008266 1.6e-28 129.0 74 82.4
Prupe.1G025800 Prunus persica HOM05D006636 ORTHO05D008266 2.1e-28 128.6 74 82.4
Thecc.04G243200 Theobroma cacao HOM05D006636 ORTHO05D008266 2.1e-28 128.6 75 82.7
Cfa008404 Carpinus fangiana HOM05D006636 ORTHO05D008266 4.8e-28 127.5 74 81.1
Manes.03G170500 Manihot esculenta HOM05D006636 ORTHO05D008266 4.8e-28 127.5 74 82.4
QL06p014938 Quercus lobata HOM05D006636 ORTHO05D008266 4.8e-28 127.5 75 82.7
CSS0008233 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 6.2e-28 127.1 75 81.3
CSS0036965 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 6.2e-28 127.1 75 81.3
Nn3g19491 Nelumbo nucifera HOM05D006636 ORTHO05D008266 8.1e-28 126.7 75 81.3
CiPaw.02G118100 Carya illinoinensis HOM05D006636 ORTHO05D008266 1.1e-27 126.3 76 80.3
Duzib212G0484 Durio zibethinus HOM05D006636 ORTHO05D008266 1.4e-27 125.9 76 77.6
COL.COLO4_15761 Corchorus olitorius HOM05D006636 ORTHO05D008266 1.8e-27 125.6 74 81.1
Lalb_Chr03g0037601 Lupinus albus HOM05D006636 ORTHO05D008266 2.4e-27 125.2 74 81.1
MD16G1204700 Malus domestica HOM05D006636 ORTHO05D008266 2.4e-27 125.2 73 82.2
Eucgr.H03183 Eucalyptus grandis HOM05D006636 ORTHO05D008266 4.0e-27 124.4 74 79.7
arahy.Tifrunner.gnm1.ann1.G1PS4Z Arachis hypogaea HOM05D006636 ORTHO05D008266 5.3e-27 124.0 74 79.7
CiPaw.01G192900 Carya illinoinensis HOM05D006636 ORTHO05D008266 5.3e-27 124.0 72 81.9
vmacro15399 Vaccinium macrocarpon HOM05D006636 ORTHO05D008266 5.3e-27 124.0 75 77.3
CSS0035223 Camellia sinensis var. sinensis HOM05D006636 ORTHO05D008266 6.9e-27 123.6 75 77.3
Cc03_g04590 Coffea canephora HOM05D006636 ORTHO05D008266 6.9e-27 123.6 74 78.4
Gohir.A10G118900 Gossypium hirsutum HOM05D006636 ORTHO05D008266 6.9e-27 123.6 76 75.0
AUR62005850 Chenopodium quinoa HOM05D006636 ORTHO05D008266 2.6e-26 121.7 80 70.0
AUR62032843 Chenopodium quinoa HOM05D006636 ORTHO05D008266 3.4e-26 121.3 80 70.0
Phvul.010G060600 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 3.4e-26 121.3 75 76.0
ClCG06G006590 Citrullus lanatus HOM05D006636 ORTHO05D008266 4.5e-26 120.9 75 78.7
MD13G1203300 Malus domestica HOM05D006636 ORTHO05D008266 4.5e-26 120.9 73 78.1
PGR142G1808 Punica granatum HOM05D006636 ORTHO05D008266 4.5e-26 120.9 74 75.7
Dinv44607 Davidia involucrata HOM05D006636 ORTHO05D008266 5.8e-26 120.6 74 78.4
Glyma.02G001300 Glycine max HOM05D006636 ORTHO05D008266 5.8e-26 120.6 74 77.0
Phvul.006G006400 Phaseolus vulgaris HOM05D006636 ORTHO05D008266 5.8e-26 120.6 74 77.0
Aqoxy5G00371 Aquilegia oxysepala HOM05D006636 ORTHO05D008266 1.3e-25 119.4 74 77.0
Sed0018024 Sechium edule HOM05D006636 ORTHO05D008266 1.3e-25 119.4 75 77.3
TWI53G1752 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.3e-25 119.4 76 76.3
TWI53G1902 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 1.3e-25 119.4 76 76.3
MSTRG.24709 Avicennia marina HOM05D006636 ORTHO05D008266 2.2e-25 118.6 76 75.0
SalBow2G2841 Salvia bowleyana HOM05D006636 ORTHO05D008266 2.2e-25 118.6 74 73.0
Oeu029765.1 Olea europaea HOM05D006636 ORTHO05D008266 2.9e-25 118.2 74 75.7
EL10Ac6g13264 Beta vulgaris HOM05D006636 ORTHO05D008266 3.8e-25 117.9 80 67.5
Carub.0001s4194 Capsella rubella HOM05D006636 ORTHO05D008266 3.8e-25 117.9 67 86.6
PSO210G2897 Papaver somniferum HOM05D006636 ORTHO05D008266 3.8e-25 117.9 75 70.7
Manes.15G035100 Manihot esculenta HOM05D006636 ORTHO05D008266 4.9e-25 117.5 74 73.0
Migut.N00229 Erythranthe guttata HOM05D006636 ORTHO05D008266 6.4e-25 117.1 71 76.1
Peaxi162Scf00788g00311 Petunia axillaris HOM05D006636 ORTHO05D008266 6.4e-25 117.1 74 73.0
Hund25206 Selenicereus undatus HOM05D006636 ORTHO05D008266 6.4e-25 117.1 74 73.0
Potri.008G160101 Populus trichocarpa HOM05D006636 ORTHO05D008266 1.1e-24 116.3 76 71.1
PSO832G4373 Papaver somniferum HOM05D006636 ORTHO05D008266 1.4e-24 115.9 75 72.0
Hund05854 Selenicereus undatus HOM05D006636 ORTHO05D008266 1.4e-24 115.9 80 66.2
Sc22g0003980 Simmondsia chinensis HOM05D006636 ORTHO05D008266 1.4e-24 115.9 74 74.3
Ah.02g129360 Amaranthus hybridus HOM05D006636 ORTHO05D008266 3.2e-24 114.8 74 71.6
Ah.03g134670 Amaranthus hybridus HOM05D006636 ORTHO05D008266 3.2e-24 114.8 74 71.6
GSVIVG01018087001 Vitis vinifera HOM05D006636 ORTHO05D008266 3.2e-24 114.8 74 74.3
ECA240G3921 Erigeron canadensis HOM05D006636 ORTHO05D008266 4.2e-24 114.4 74 73.0
Lsat_1_v5_gn_3_124880 Lactuca sativa HOM05D006636 ORTHO05D008266 4.2e-24 114.4 74 73.0
TWI73G0386 Tripterygium wilfordii HOM05D006636 ORTHO05D008266 4.2e-24 114.4 76 72.4
Potri.010G079100 Populus trichocarpa HOM05D006636 ORTHO05D008266 7.1e-24 113.6 76 68.4
Oeu032618.1 Olea europaea HOM05D006636 ORTHO05D008266 9.3e-24 113.2 73 74.0
Lsat_1_v5_gn_6_37261 Lactuca sativa HOM05D006636 ORTHO05D008266 2.1e-23 112.1 73 72.6
Nitab4.5_0001856g0080 Nicotiana tabacum HOM05D006636 ORTHO05D008266 4.6e-23 110.9 73 69.9
Dinv14071 Davidia involucrata HOM05D006636 ORTHO05D008266 1.0e-22 109.8 66 78.8
Nitab4.5_0001787g0030 Nicotiana tabacum HOM05D006636 ORTHO05D008266 1.0e-22 109.8 73 69.9
TAR365G0562 Trochodendron aralioides HOM05D006636 ORTHO05D008266 1.0e-22 109.8 75 68.0
CAN.G749.28 Capsicum annuum HOM05D006636 ORTHO05D008266 3.0e-22 108.2 73 67.1
Solyc09g083070.3 Solanum lycopersicum HOM05D006636 ORTHO05D008266 3.0e-22 108.2 73 68.5
Lj3g0021432 Lotus japonicus HOM05D006636 ORTHO05D008266 3.9e-22 107.8 75 72.0
Sopen09g031950 Solanum pennellii HOM05D006636 ORTHO05D008266 8.7e-22 106.7 73 67.1
Haze_11264 Corylus avellana HOM05D006636 ORTHO05D008266 1.5e-21 105.9 104 55.8
Medtr1g040905 Medicago truncatula HOM05D006636 ORTHO05D008266 4.3e-21 104.4 77 66.2
TPR.G32796 Trifolium pratense HOM05D006636 ORTHO05D008266 5.6e-21 104.0 75 66.7
Ca_12203_v3 Cicer arietinum L. HOM05D006636 ORTHO05D008266 7.4e-21 103.6 75 66.7
Psat6g136920 Pisum sativum HOM05D006636 ORTHO05D008266 7.4e-21 103.6 75 66.7
Zm00001eb116910 Zea mays HOM05D006636 ORTHO05D008266 7.4e-21 103.6 73 68.5
Os07g0181800 Oryza sativa ssp. japonica HOM05D006636 ORTHO05D008266 1.3e-20 102.8 73 65.8
ATR0665G452 Amborella trichopoda HOM05D006636 ORTHO05D008266 1.6e-20 102.4 67 68.7
Psat4g201760 Pisum sativum HOM05D000716 ORTHO05D009512 4.8e-20 100.9 75 64.0
HPP92_009619 Vanilla planifolia HOM05D006636 ORTHO05D008266 6.9e-19 97.1 72 65.3
Psat4g152400 Pisum sativum HOM05D006636 ORTHO05D008266 9.0e-19 96.7 75 62.7
CDE07G1452 Ceratophyllum demersum HOM05D006636 ORTHO05D008266 4.5e-18 94.4 75 57.3
Pp3c4_21990 Physcomitrium patens HOM05D006636 ORTHO05D008266 1.0e-17 93.2 68 60.3
Sabra10G0063800 Salix brachista HOM05D006636 ORTHO05D008266 2.2e-17 92.0 118 44.1
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 3.5e-15 84.7 66 62.1
Mapoly0075s0084 Marchantia polymorpha HOM05D006636 ORTHO05D008266 1.0e-14 83.2 68 54.4
HanXRQChr13g0424641 Helianthus annuus HOM05D006636 ORTHO05D008266 1.6e-12 75.9 47 74.5
AagrBONN_evm.TU.Sc2ySwM_117.3049 Anthoceros agrestis HOM05D006636 ORTHO05D008266 1.8e-11 72.4 62 53.2
unitig_26.g9474 Utricularia gibba HOM05D006636 ORTHO05D008266 3.4e-10 68.2 43 69.8
PGSC0003DMG400006103 Solanum tuberosum HOM05D006636 ORTHO05D008266 7.6e-10 67.0 46 63.0
Actinidia40100 Actinidia chinensis HOM05D006636 ORTHO05D008266 2.2e-09 65.5 67 49.3
Psat0s152g0080 Pisum sativum HOM05D006636 ORTHO05D008266 2.9e-09 65.1 57 54.4
SalBow4G0852 Salvia bowleyana HOM05D006636 ORTHO05D008266 3.8e-09 64.7 43 65.1
GSVIVG01002945001 Vitis vinifera HOM05D006636 ORTHO05D008266 3.2e-08 61.6 41 68.3
MCO07G270 Micromonas commoda HOM05D006636 ORTHO05D008266 5.5e-08 60.8 63 44.4
FvH4_4g02000 Fragaria vesca HOM05D006636 ORTHO05D008266 1.2e-07 59.7 34 82.4
SHI00567 Sapria himalayana HOM05D006636 ORTHO05D008266 1.6e-07 59.3 43 65.1
Rhsim02G0032300 Rhododendron simsii HOM05D006636 ORTHO05D008266 7.9e-07 57.0 33 75.8
MBI04_g19760_MAGBIO Magnolia biondii HOM05D006636 ORTHO05D008266 3.0e-06 55.1 35 68.6


User provided reference genes

Program Settings