Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 1.0e-123 446.8 233 100.0
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 8.0e-113 410.6 233 92.3
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 8.8e-112 407.1 233 91.4
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 8.8e-112 407.1 233 91.4
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 1.2e-111 406.8 233 91.4
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 5.0e-99 364.8 235 84.3
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 4.6e-84 315.1 241 74.7
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 1.1e-82 310.5 237 73.4
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 2.8e-81 305.8 237 72.2
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 1.8e-80 303.1 251 68.1
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.9e-77 293.1 246 65.9
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 1.1e-74 283.9 234 69.7
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 1.9e-74 283.1 234 69.7
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 3.6e-73 278.9 235 69.4
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 3.6e-73 278.9 230 69.1
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 3.4e-71 272.3 249 65.9
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 5.8e-71 271.6 234 67.9
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 2.4e-61 239.6 235 61.7
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 4.5e-55 218.8 190 62.1
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.1e-36 156.8 175 51.4
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 3.6e-36 156.0 181 48.6
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 7.9e-36 154.8 151 54.3
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 3.3e-34 149.4 149 53.7
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 4.3e-34 149.1 173 48.0
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 3.1e-32 142.9 148 52.0
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 3.1e-32 142.9 148 52.0
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 4.1e-32 142.5 139 54.7
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 5.3e-32 142.1 176 49.4
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 5.3e-32 142.1 176 49.4
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 1.0e-30 137.9 165 46.7
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 1.7e-30 137.1 149 52.3
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 8.5e-30 134.8 145 49.0
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 1.9e-29 133.7 155 45.8
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.5e-29 133.3 162 44.4
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 3.2e-29 132.9 145 47.6
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 4.2e-29 132.5 191 43.5
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 5.5e-29 132.1 145 47.6
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 9.4e-29 131.3 182 42.3
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 2.1e-28 130.2 166 44.0
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 4.7e-28 129.0 169 43.2
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 7.9e-28 128.3 163 42.9
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 1.4e-27 127.5 185 41.6
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 5.1e-27 125.6 170 41.2
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 5.1e-27 125.6 166 42.8
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 5.1e-27 125.6 166 42.8
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 5.1e-27 125.6 142 47.9
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 6.7e-27 125.2 141 49.6
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 1.1e-26 124.4 158 44.3
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 2.0e-26 123.6 142 47.2
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 2.6e-26 123.2 142 45.1
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 3.3e-26 122.9 143 49.7
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 3.3e-26 122.9 251 35.9
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 9.7e-26 121.3 182 46.7
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 1.3e-25 120.9 174 38.5
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 1.3e-25 120.9 180 41.1
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 1.3e-25 120.9 252 35.7
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 1.7e-25 120.6 158 44.3
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 2.8e-25 119.8 186 37.1
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 2.8e-25 119.8 142 40.8
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 2.8e-25 119.8 151 44.4
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.7e-25 119.4 137 43.1
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 4.8e-25 119.0 151 43.0
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 4.8e-25 119.0 163 39.3
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 6.3e-25 118.6 147 44.2
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 6.3e-25 118.6 165 40.6
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 8.2e-25 118.2 158 41.8
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.1e-24 117.9 137 45.3
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 1.4e-24 117.5 151 39.7
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 1.8e-24 117.1 170 41.8
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.4e-24 116.7 141 40.4
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 5.3e-24 115.5 145 39.3
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 9.1e-24 114.8 71 83.1
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.5e-23 114.0 188 37.2
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 4.5e-23 112.5 148 43.2
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 5.9e-23 112.1 169 41.4
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 5.9e-23 112.1 141 42.6
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 1.0e-22 111.3 170 37.6
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 2.2e-22 110.2 142 43.7
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 5.0e-22 109.0 181 35.9
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 8.5e-22 108.2 158 41.1
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 1.9e-21 107.1 142 42.3
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 2.5e-21 106.7 71 74.6
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 7.2e-21 105.1 109 47.7
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 1.2e-20 104.4 142 35.2
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 1.2e-20 104.4 200 35.5
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 4.7e-20 102.4 144 42.4
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 4.7e-20 102.4 148 42.6
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 8.0e-20 101.7 146 39.7
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 1.4e-19 100.9 152 38.8
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 1.8e-19 100.5 159 39.0
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 1.8e-19 100.5 171 40.9
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 5.2e-19 99.0 129 42.6
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 5.2e-19 99.0 129 42.6
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.5e-18 97.4 74 58.1
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.6e-18 96.7 74 56.8
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 3.3e-18 96.3 137 42.3
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 4.4e-18 95.9 170 38.8
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 1.3e-17 94.4 148 36.5
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.2e-17 93.6 179 38.0
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 2.2e-17 93.6 169 33.7
BcaB01g02128 Brassica carinata HOM05D005423 ORTHO05D006223 4.8e-17 92.4 90 55.6
A09p38220 Brassica napus HOM05D005423 ORTHO05D006223 4.8e-17 92.4 59 81.4
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 4.1e-16 89.4 113 44.2
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 1.2e-15 87.8 81 50.6
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 2.6e-15 86.7 81 49.4
AL7G23570 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 4.5e-15 85.9 138 41.3
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.3e-14 84.3 175 34.3
C09p04090 Brassica napus HOM05D005423 ORTHO05D006223 4.2e-13 79.3 50 80.0
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 9.4e-13 78.2 100 45.0
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.7e-12 75.9 120 38.3
C07p57610 Brassica napus HOM05D005423 ORTHO05D006223 1.4e-11 74.3 159 34.0
Duzib043G0004 Durio zibethinus HOM05D005423 ORTHO05D006223 1.8e-11 73.9 160 35.0
DCAR_001448 Daucus carota HOM05D005423 ORTHO05D006223 3.0e-11 73.2 176 30.7
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 3.0e-11 73.2 128 39.1
C07p36590 Brassica napus HOM05D035163 ORTHO05D012808 4.0e-11 72.8 47 78.7
BolC7t46226H Brassica oleracea HOM05D005423 ORTHO05D006223 6.7e-11 72.0 159 33.3
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 8.8e-11 71.6 105 41.0
Potri.011G155150 Populus trichocarpa HOM05D005423 ORTHO05D006223 1.2e-10 71.2 109 40.4
SEGI_37477 Sequoiadendron giganteum HOM05D007205 ORTHO05D009175 1.5e-10 70.9 103 38.8
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 1.5e-10 70.9 118 43.2
FAN23G0143 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.0e-10 70.5 95 42.1
Carub.0007s1174 Capsella rubella HOM05D005423 ORTHO05D006223 3.3e-10 69.7 169 34.3
FvH4_1g24910 Fragaria vesca HOM05D005423 ORTHO05D006223 6.3e-09 65.5 98 39.8
Aqoxy7G03258 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 8.2e-09 65.1 121 38.8
FvH4_5g18240 Fragaria vesca HOM05D005423 ORTHO05D006223 1.1e-08 64.7 105 37.1
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 3.1e-08 63.2 101 36.6
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 5.3e-08 62.4 103 41.7
FAN18G3875 Fragaria x ananassa HOM05D005423 ORTHO05D006223 7.0e-08 62.0 135 36.3
SEGI_15553 Sequoiadendron giganteum HOM05D007205 ORTHO05D009175 1.2e-07 61.2 100 36.0
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 1.6e-07 60.8 102 41.2
EL10Ac6g13873 Beta vulgaris HOM05D005305 ORTHO05D006394 2.0e-07 60.5 69 43.5
FvH4_5g21920 Fragaria vesca HOM05D005423 ORTHO05D006223 2.0e-07 60.5 101 33.7
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 2.0e-07 60.5 74 41.9
DCAR_002955 Daucus carota HOM05D005423 ORTHO05D006223 4.5e-07 59.3 72 37.5
Thhalv10027213m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 4.5e-07 59.3 45 64.4
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 4.5e-07 59.3 118 32.2
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 7.7e-07 58.5 69 44.9
MBI18_g38398_MAGBIO Magnolia biondii HOM05D007205 ORTHO05D009175 7.7e-07 58.5 116 31.0
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 7.7e-07 58.5 133 29.3
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 7.7e-07 58.5 122 32.0
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 1.0e-06 58.2 117 34.2
SGA_v2.0_scaffold10G05347 Striga asiatica HOM05D007205 ORTHO05D009175 1.0e-06 58.2 117 33.3
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 1.3e-06 57.8 97 35.1
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 1.3e-06 57.8 108 40.7
Pp3c13_8280 Physcomitrium patens HOM05D022662 ORTHO05D006223 1.3e-06 57.8 137 24.8
Pp3c26_11940 Physcomitrium patens HOM05D022662 ORTHO05D006223 1.7e-06 57.4 137 24.8
Sc12g0002500 Simmondsia chinensis HOM05D007205 ORTHO05D009175 1.7e-06 57.4 77 45.5
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 2.2e-06 57.0 119 33.6
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 2.2e-06 57.0 119 33.6
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 2.2e-06 57.0 140 30.7
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 2.2e-06 57.0 108 38.9
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 2.9e-06 56.6 105 41.9
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 2.9e-06 56.6 69 43.5
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 2.9e-06 56.6 117 36.8
Solyc07g053000.1 Solanum lycopersicum HOM05D007205 ORTHO05D009175 2.9e-06 56.6 70 37.1
Sopen07g026550 Solanum pennellii HOM05D007205 ORTHO05D009175 2.9e-06 56.6 70 37.1
CAN.G86.36 Capsicum annuum HOM05D007205 ORTHO05D009175 3.8e-06 56.2 105 32.4
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 3.8e-06 56.2 103 36.9
Nitab4.5_0009996g0030 Nicotiana tabacum HOM05D007205 ORTHO05D009175 3.8e-06 56.2 68 38.2
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 5.0e-06 55.8 115 38.3
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 5.0e-06 55.8 199 31.7
Rhsim06G0154800 Rhododendron simsii HOM05D007205 ORTHO05D009175 5.0e-06 55.8 70 41.4
PGSC0003DMG400040434 Solanum tuberosum HOM05D007205 ORTHO05D009175 5.0e-06 55.8 70 37.1
TWI75G1301 Tripterygium wilfordii HOM05D007205 ORTHO05D009175 5.0e-06 55.8 100 36.0
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 6.5e-06 55.5 176 31.8
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 6.5e-06 55.5 181 27.6
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 6.5e-06 55.5 97 40.2
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 6.5e-06 55.5 97 40.2
HanXRQChr17g0564241 Helianthus annuus HOM05D007205 ORTHO05D009175 6.5e-06 55.5 68 41.2
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 8.5e-06 55.1 69 40.6
Nn8g39654 Nelumbo nucifera HOM05D005423 ORTHO05D006223 8.5e-06 55.1 65 43.1
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 8.5e-06 55.1 158 31.0


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