Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17983 Brassica carinata HOM05D008703 ORTHO05D006961 2.2e-35 151.8 78 100.0
BcaC07g37617 Brassica carinata HOM05D008703 ORTHO05D006961 3.8e-27 124.4 80 81.2
BolC8t47976H Brassica oleracea HOM05D008703 ORTHO05D006961 3.8e-27 124.4 80 81.2
A08p09220 Brassica napus HOM05D008703 ORTHO05D006961 8.5e-27 123.2 80 80.0
BraA08t32922Z Brassica rapa HOM05D008703 ORTHO05D006961 8.5e-27 123.2 80 80.0
BcaC07g37618 Brassica carinata HOM05D008703 ORTHO05D006961 3.2e-26 121.3 80 80.0
AL1G47200 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 4.4e-23 110.9 82 78.0
BcaC05g27315 Brassica carinata HOM05D008703 ORTHO05D006961 2.2e-22 108.6 80 77.5
CARHR032240 Cardamine hirsuta HOM05D008703 ORTHO05D006961 3.7e-22 107.8 78 75.6
C05p32370 Brassica napus HOM05D008703 ORTHO05D006961 4.9e-22 107.5 80 77.5
BolC5t31968H Brassica oleracea HOM05D008703 ORTHO05D006961 4.9e-22 107.5 80 77.5
A09p33480 Brassica napus HOM05D008703 ORTHO05D006961 3.1e-21 104.8 80 75.0
BraA09t38890Z Brassica rapa HOM05D008703 ORTHO05D006961 3.1e-21 104.8 80 75.0
AT1G32920 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 2.0e-20 102.1 80 73.8
Thhalv10009241m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 6.6e-19 97.1 80 70.0
Aa31LG6G7510 Aethionema arabicum HOM05D008703 ORTHO05D006961 4.2e-18 94.4 83 67.5
AL1G47210 Arabidopsis lyrata HOM05D008703 ORTHO05D006961 2.3e-11 72.0 84 50.0
AT1G32928 Arabidopsis thaliana HOM05D008703 ORTHO05D006961 2.3e-11 72.0 87 54.0
Carub.0001s3124 Capsella rubella HOM05D008703 ORTHO05D006961 2.3e-11 72.0 83 54.2
Sp1g28080 Schrenkiella parvula HOM05D008703 ORTHO05D006961 6.6e-11 70.5 85 51.8
A05p24420 Brassica napus HOM05D008703 ORTHO05D006961 8.6e-11 70.1 80 51.2
BolC5t32543H Brassica oleracea HOM05D008703 ORTHO05D006961 8.6e-11 70.1 80 51.2
BraA05t21333Z Brassica rapa HOM05D008703 ORTHO05D006961 8.6e-11 70.1 80 51.2
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 1.5e-10 69.3 84 53.6
BcaC05g27814 Brassica carinata HOM05D008703 ORTHO05D006961 4.3e-10 67.8 80 50.0
C05p38160 Brassica napus HOM05D008703 ORTHO05D006961 4.3e-10 67.8 80 50.0
Aa31LG6G7520 Aethionema arabicum HOM05D008703 ORTHO05D006961 9.5e-10 66.6 84 48.8
CARHR032250 Cardamine hirsuta HOM05D008703 ORTHO05D006961 9.5e-10 66.6 82 48.8
Carub.0001s3123 Capsella rubella HOM05D008703 ORTHO05D006961 1.6e-09 65.9 86 52.3
A09p33470 Brassica napus HOM05D008703 ORTHO05D006961 6.2e-09 63.9 85 49.4
BraA09t38889Z Brassica rapa HOM05D008703 ORTHO05D006961 6.2e-09 63.9 85 49.4
Thhalv10009742m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 1.4e-08 62.8 85 47.1
Aa31LG9G11460 Aethionema arabicum HOM05D008703 ORTHO05D006961 1.8e-08 62.4 82 47.6
Aa31LG9G11510 Aethionema arabicum HOM05D008703 ORTHO05D006961 4.0e-08 61.2 82 46.3
Aa31LG9G11540 Aethionema arabicum HOM05D008703 ORTHO05D006961 5.2e-08 60.8 82 46.3
Thhalv10029203m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 2.0e-07 58.9 78 48.7
ClCG01G001400 Citrullus lanatus HOM05D018156 ORTHO05D006961 4.4e-07 57.8 85 45.9
MELO3C005796.2 Cucumis melo HOM05D018156 ORTHO05D006961 4.4e-07 57.8 88 40.9
CARHR256120 Cardamine hirsuta HOM05D008703 ORTHO05D006961 1.3e-06 56.2 77 45.5
BcaC05g27316 Brassica carinata HOM05D008703 ORTHO05D006961 2.9e-06 55.1 88 48.9
BolC5t31969H Brassica oleracea HOM05D008703 ORTHO05D006961 2.9e-06 55.1 88 48.9
Thhalv10009230m.g Eutrema salsugineum HOM05D008703 ORTHO05D006961 2.9e-06 55.1 85 43.5
Gohir.D08G121900 Gossypium hirsutum HOM05D008613 ORTHO05D006961 4.9e-06 54.3 83 44.6
FvH4_5g10560 Fragaria vesca HOM05D008613 ORTHO05D006961 6.4e-06 53.9 89 42.7
FAN04G2016 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.4e-06 53.9 89 42.7
FAN08G0050 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.4e-06 53.9 89 42.7
FAN18G1327 Fragaria x ananassa HOM05D008613 ORTHO05D006961 6.4e-06 53.9 89 42.7
Atru.chr9.1866 Acer truncatum HOM05D008613 ORTHO05D006961 8.3e-06 53.5 83 45.8


User provided reference genes

Program Settings