Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17955 Brassica carinata HOM05D001648 ORTHO05D001657 1.5e-58 229.2 108 100.0
Sp1g28330 Schrenkiella parvula HOM05D001648 ORTHO05D001657 4.7e-23 111.3 82 65.9
Thhalv10009407m.g Eutrema salsugineum HOM05D001648 ORTHO05D001657 2.7e-15 85.5 52 78.8
AL1G46840 Arabidopsis lyrata HOM05D001648 ORTHO05D001657 4.7e-15 84.7 54 75.9
AT1G32583 Arabidopsis thaliana HOM05D001648 ORTHO05D001657 4.7e-15 84.7 54 75.9
Carub.0001s3098 Capsella rubella HOM05D001648 ORTHO05D001657 1.8e-14 82.8 52 76.9
BcaB03g13722 Brassica carinata HOM05D001648 ORTHO05D001657 5.2e-14 81.3 54 72.2
CARHR032030 Cardamine hirsuta HOM05D001648 ORTHO05D001657 1.1e-13 80.1 54 72.2
A05p24730 Brassica napus HOM05D001648 ORTHO05D001657 1.5e-13 79.7 54 68.5
BraA05t21356Z Brassica rapa HOM05D001648 ORTHO05D001657 1.5e-13 79.7 54 68.5
A08p09030 Brassica napus HOM05D001648 ORTHO05D001657 4.4e-13 78.2 54 72.2
BcaC05g27843 Brassica carinata HOM05D001648 ORTHO05D001657 5.7e-13 77.8 54 66.7
C05p38400 Brassica napus HOM05D001648 ORTHO05D001657 5.7e-13 77.8 54 66.7
BolC5t32576H Brassica oleracea HOM05D001648 ORTHO05D001657 5.7e-13 77.8 54 66.7
MD00G1057600 Malus domestica HOM05D001648 ORTHO05D001657 3.5e-10 68.6 49 63.3
Aa31LG2G13380 Aethionema arabicum HOM05D001648 ORTHO05D001657 1.0e-09 67.0 78 50.0
CSS0000298 Camellia sinensis var. sinensis HOM05D001648 ORTHO05D001657 1.0e-09 67.0 68 48.5
Gohir.D06G162100 Gossypium hirsutum HOM05D001648 ORTHO05D001657 1.3e-09 66.6 56 55.4
Gohir.A06G155700 Gossypium hirsutum HOM05D001648 ORTHO05D001657 2.2e-09 65.9 56 55.4
Gorai.010G189100 Gossypium raimondii HOM05D001648 ORTHO05D001657 2.2e-09 65.9 56 55.4
MBI19_g20145_MAGBIO Magnolia biondii HOM05D001648 ORTHO05D001657 2.2e-09 65.9 49 55.1
Cfa000055 Carpinus fangiana HOM05D001648 ORTHO05D001657 2.9e-09 65.5 49 63.3
Duzib192G0395 Durio zibethinus HOM05D001648 ORTHO05D001657 2.9e-09 65.5 54 57.4
Haze_06999 Corylus avellana HOM05D001648 ORTHO05D001657 3.8e-09 65.1 49 61.2
Prupe.4G006300 Prunus persica HOM05D001648 ORTHO05D001657 3.8e-09 65.1 56 58.9
THA.LOC104812783 Tarenaya hassleriana HOM05D001648 ORTHO05D001657 3.8e-09 65.1 49 63.3
BolC8t47941H Brassica oleracea HOM05D001648 ORTHO05D001657 5.0e-09 64.7 61 57.4
FvH4_3g00520 Fragaria vesca HOM05D001648 ORTHO05D001657 8.5e-09 63.9 49 57.1
FAN21G3993 Fragaria x ananassa HOM05D001648 ORTHO05D001657 8.5e-09 63.9 49 57.1
FAN25G2232 Fragaria x ananassa HOM05D001648 ORTHO05D001657 1.1e-08 63.5 49 55.1
Actinidia11901 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.5e-08 63.2 49 59.2
Actinidia26838 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.5e-08 63.2 57 52.6
Dinv15364 Davidia involucrata HOM05D001648 ORTHO05D001657 1.9e-08 62.8 54 53.7
PGR042G1232 Punica granatum HOM05D001648 ORTHO05D001657 1.9e-08 62.8 49 55.1
CDE05G2964 Ceratophyllum demersum HOM05D001648 ORTHO05D001657 3.2e-08 62.0 48 58.3
ClCG01G021330 Citrullus lanatus HOM05D001648 ORTHO05D001657 3.2e-08 62.0 49 53.1
CiPaw.09G107100 Carya illinoinensis HOM05D001648 ORTHO05D001657 4.2e-08 61.6 77 42.9
Sc05g0009770 Simmondsia chinensis HOM05D001648 ORTHO05D001657 5.5e-08 61.2 55 54.5
CDE05G1156 Ceratophyllum demersum HOM05D001648 ORTHO05D001657 7.2e-08 60.8 49 57.1
MBI07_g24741_MAGBIO Magnolia biondii HOM05D001648 ORTHO05D001657 7.2e-08 60.8 49 57.1
PSO357G0566 Papaver somniferum HOM05D001648 ORTHO05D001657 9.4e-08 60.5 57 52.6
RcHm_v2.0_Chr5g0000721 Rosa chinensis HOM05D001648 ORTHO05D001657 9.4e-08 60.5 49 53.1
Glyma.06G167300 Glycine max HOM05D001648 ORTHO05D001657 1.2e-07 60.1 59 50.8
GSVIVG01003483001 Vitis vinifera HOM05D001648 ORTHO05D001657 1.2e-07 60.1 55 52.7
Actinidia02293 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.6e-07 59.7 49 53.1
Potri.006G017600 Populus trichocarpa HOM05D001648 ORTHO05D001657 2.1e-07 59.3 49 57.1
Actinidia18332 Actinidia chinensis HOM05D001648 ORTHO05D001657 2.7e-07 58.9 50 62.0
CsaV3_6G048340 Cucumis sativus L. HOM05D001648 ORTHO05D001657 2.7e-07 58.9 49 51.0
Sabra06G0012600 Salix brachista HOM05D001648 ORTHO05D001657 2.7e-07 58.9 80 45.0
SEGI_06802 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 2.7e-07 58.9 88 37.5
SGA_v2.0_scaffold40G15582 Striga asiatica HOM05D001648 ORTHO05D001657 3.6e-07 58.5 69 52.2
TAR629G0097 Trochodendron aralioides HOM05D001648 ORTHO05D001657 3.6e-07 58.5 50 52.0
PSO017G6248 Papaver somniferum HOM05D001648 ORTHO05D001657 4.7e-07 58.2 50 60.0
PSO478G1048 Papaver somniferum HOM05D001648 ORTHO05D001657 4.7e-07 58.2 50 60.0
SalBow5G1376 Salvia bowleyana HOM05D001648 ORTHO05D001657 4.7e-07 58.2 50 58.0
SalBow5G4060 Salvia bowleyana HOM05D001648 ORTHO05D001657 4.7e-07 58.2 50 58.0
SEGI_09789 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 4.7e-07 58.2 50 50.0
MBI07_g33360_MAGBIO Magnolia biondii HOM05D001648 ORTHO05D001657 6.1e-07 57.8 49 57.1
Phvul.003G085600 Phaseolus vulgaris HOM05D001648 ORTHO05D001657 6.1e-07 57.8 60 50.0
Migut.I00562 Erythranthe guttata HOM05D001648 ORTHO05D001657 8.0e-07 57.4 50 58.0
Lalb_Chr23g0273631 Lupinus albus HOM05D001648 ORTHO05D001657 8.0e-07 57.4 75 40.0
Rhsim02G0091000 Rhododendron simsii HOM05D001648 ORTHO05D001657 8.0e-07 57.4 49 51.0
Sed0017525 Sechium edule HOM05D001648 ORTHO05D001657 8.0e-07 57.4 49 49.0
A01p16270 Brassica napus HOM05D001648 ORTHO05D001657 1.0e-06 57.0 81 40.7
Medtr3g098960 Medicago truncatula HOM05D001648 ORTHO05D001657 1.0e-06 57.0 51 56.9
Nn3g16370 Nelumbo nucifera HOM05D001648 ORTHO05D001657 1.0e-06 57.0 83 37.3
SGA_v2.0_scaffold382G50395 Striga asiatica HOM05D001648 ORTHO05D001657 1.0e-06 57.0 50 58.0
VMungo1215G3298 Vigna mungo HOM05D001648 ORTHO05D001657 1.0e-06 57.0 60 50.0
Ca_16063_v3 Cicer arietinum L. HOM05D001648 ORTHO05D001657 1.4e-06 56.6 75 38.7
Ca_16066_v3 Cicer arietinum L. HOM05D001648 ORTHO05D001657 1.4e-06 56.6 75 38.7
BcaC09g50826 Brassica carinata HOM05D001648 ORTHO05D001657 1.8e-06 56.2 49 53.1
BcaNung03986 Brassica carinata HOM05D001648 ORTHO05D001657 1.8e-06 56.2 49 53.1
C01p20270 Brassica napus HOM05D001648 ORTHO05D001657 1.8e-06 56.2 49 53.1
BolC1t01957H Brassica oleracea HOM05D001648 ORTHO05D001657 1.8e-06 56.2 49 53.1
Glyma.04G198200 Glycine max HOM05D001648 ORTHO05D001657 1.8e-06 56.2 58 48.3
Actinidia25551 Actinidia chinensis HOM05D001648 ORTHO05D001657 2.3e-06 55.8 57 54.4
Oeu002773.1 Olea europaea HOM05D001648 ORTHO05D001657 2.3e-06 55.8 50 56.0
Peaxi162Scf00516g00026 Petunia axillaris HOM05D001648 ORTHO05D001657 2.3e-06 55.8 60 51.7
Sp7g22970 Schrenkiella parvula HOM05D001648 ORTHO05D001657 2.3e-06 55.8 49 51.0
VMungo1309G1403 Vigna mungo HOM05D001648 ORTHO05D001657 2.3e-06 55.8 70 41.4
arahy.Tifrunner.gnm1.ann1.8D5WLD Arachis hypogaea HOM05D001648 ORTHO05D001657 3.0e-06 55.5 51 54.9
arahy.Tifrunner.gnm1.ann1.V2EIWI Arachis hypogaea HOM05D001648 ORTHO05D001657 3.0e-06 55.5 51 54.9
CANSAT56G4242 Cannabis sativa HOM05D001648 ORTHO05D001657 3.0e-06 55.5 56 50.0
Eucgr.K02699 Eucalyptus grandis HOM05D001648 ORTHO05D001657 3.0e-06 55.5 56 46.4
SEGI_22146 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 3.0e-06 55.5 72 40.3
Thecc.06G238000 Theobroma cacao HOM05D001648 ORTHO05D001657 3.0e-06 55.5 50 54.0
TPR.G35265 Trifolium pratense HOM05D001648 ORTHO05D001657 3.0e-06 55.5 50 58.0
TAR622G0580 Trochodendron aralioides HOM05D001648 ORTHO05D001657 3.0e-06 55.5 50 58.0
vmacro15734 Vaccinium macrocarpon HOM05D001648 ORTHO05D001657 3.0e-06 55.5 49 46.9
Ciclev10018137m.g Citrus clementina HOM05D001648 ORTHO05D001657 4.0e-06 55.1 66 43.9
Manes.06G122700 Manihot esculenta HOM05D001648 ORTHO05D001657 4.0e-06 55.1 48 52.1
PSO017G0251 Papaver somniferum HOM05D001648 ORTHO05D001657 4.0e-06 55.1 43 60.5
PSO478G0651 Papaver somniferum HOM05D001648 ORTHO05D001657 4.0e-06 55.1 43 60.5
Psat5g052920 Pisum sativum HOM05D001648 ORTHO05D001657 4.0e-06 55.1 50 56.0
Rhsim12G0177800 Rhododendron simsii HOM05D001648 ORTHO05D001657 4.0e-06 55.1 50 58.0
PGSC0003DMG400031737 Solanum tuberosum HOM05D001648 ORTHO05D001657 4.0e-06 55.1 60 51.7
Actinidia36825 Actinidia chinensis HOM05D001648 ORTHO05D001657 5.2e-06 54.7 43 58.1
AagrBONN_evm.TU.Sc2ySwM_344.3222 Anthoceros agrestis HOM05D001648 ORTHO05D001657 5.2e-06 54.7 51 43.1
Nitab4.5_0001332g0060 Nicotiana tabacum HOM05D001648 ORTHO05D001657 5.2e-06 54.7 77 45.5
Nitab4.5_0003383g0020 Nicotiana tabacum HOM05D001648 ORTHO05D001657 5.2e-06 54.7 50 58.0
TWI23G0166 Tripterygium wilfordii HOM05D001648 ORTHO05D001657 5.2e-06 54.7 48 54.2
TAR374G0776 Trochodendron aralioides HOM05D001648 ORTHO05D001657 5.2e-06 54.7 50 56.0
MSTRG.16043 Avicennia marina HOM05D001648 ORTHO05D001657 6.7e-06 54.3 75 44.0
ECA232G3473 Erigeron canadensis HOM05D001648 ORTHO05D001657 6.7e-06 54.3 50 56.0
SEGI_19063 Sequoiadendron giganteum HOM05D001648 ORTHO05D001657 6.7e-06 54.3 50 50.0
unitig_744.g24641 Utricularia gibba HOM05D001648 ORTHO05D001657 6.7e-06 54.3 50 52.0
ATR0582G030 Amborella trichopoda HOM05D001648 ORTHO05D001657 8.8e-06 53.9 49 46.9
CSS0016959 Camellia sinensis var. sinensis HOM05D001648 ORTHO05D001657 8.8e-06 53.9 50 56.0
CSS0022295 Camellia sinensis var. sinensis HOM05D001648 ORTHO05D001657 8.8e-06 53.9 50 56.0
Dinv11202 Davidia involucrata HOM05D001648 ORTHO05D001657 8.8e-06 53.9 50 56.0
Phvul.009G162500 Phaseolus vulgaris HOM05D001648 ORTHO05D001657 8.8e-06 53.9 70 41.4
RcHm_v2.0_Chr7g0189441 Rosa chinensis HOM05D001648 ORTHO05D001657 8.8e-06 53.9 54 44.4


User provided reference genes

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