Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17812 Brassica carinata HOM05D008960 ORTHO05D021862 3.6e-230 801.2 403 100.0
C03p18280 Brassica napus HOM05D008960 ORTHO05D021862 1.0e-91 341.3 262 70.2
BolC3t14226H Brassica oleracea HOM05D008960 ORTHO05D021862 1.0e-91 341.3 262 70.2
BolC3t14293H Brassica oleracea HOM05D008960 ORTHO05D021862 8.7e-91 338.2 262 69.8
BcaB06g29478 Brassica carinata HOM05D008960 ORTHO05D021621 3.7e-65 253.1 252 57.5
BcaC03g18085 Brassica carinata HOM05D008960 ORTHO05D021621 3.7e-65 253.1 252 57.5
BolC2t12209H Brassica oleracea HOM05D008960 ORTHO05D021621 3.7e-65 253.1 252 57.5
A06p00150 Brassica napus HOM05D008960 ORTHO05D021621 1.0e-62 245.0 256 56.6
A07p28910 Brassica napus HOM05D008960 ORTHO05D021621 5.0e-62 242.7 256 56.2
BraA07t30533Z Brassica rapa HOM05D008960 ORTHO05D021621 5.0e-62 242.7 256 56.2
BraA10t42359Z Brassica rapa HOM05D008960 ORTHO05D019923 7.5e-58 228.8 362 44.5
C02p03040 Brassica napus HOM05D008960 ORTHO05D019923 5.3e-56 222.6 364 44.8
BcaC07g38237 Brassica carinata HOM05D008960 ORTHO05D019923 1.0e-54 218.4 202 61.9
C08p09880 Brassica napus HOM05D008960 ORTHO05D019923 1.0e-54 218.4 202 61.9
BolC8t48664H Brassica oleracea HOM05D008960 ORTHO05D019923 1.3e-54 218.0 202 61.9
C03p49100 Brassica napus HOM05D008960 ORTHO05D019923 4.7e-52 209.5 202 60.4
C06p42770 Brassica napus HOM05D008960 ORTHO05D033710 6.1e-52 209.1 212 56.1
C06p23680 Brassica napus HOM05D008960 ORTHO05D019923 3.0e-51 206.8 202 59.9
BcaC06g35218 Brassica carinata HOM05D008960 ORTHO05D091464 4.0e-51 206.5 280 47.1
BcaC01g00023 Brassica carinata HOM05D008960 ORTHO05D091451 2.0e-42 177.6 185 55.1
A10p24070 Brassica napus HOM05D009661 ORTHO05D018783 2.0e-34 151.0 223 47.5
BraA10t44470Z Brassica rapa HOM05D009661 ORTHO05D018783 2.0e-34 151.0 223 47.5
C06p25450 Brassica napus HOM05D009661 ORTHO05D020160 8.3e-33 145.6 254 42.1
C03p64400 Brassica napus HOM05D009661 ORTHO05D018783 5.4e-32 142.9 220 45.5
C07p18550 Brassica napus HOM05D008960 ORTHO05D103607 9.2e-32 142.1 250 40.0
A06p35440 Brassica napus HOM05D009661 ORTHO05D018783 6.0e-31 139.4 230 44.8
BraA06t26467Z Brassica rapa HOM05D009661 ORTHO05D018783 6.0e-31 139.4 230 44.8
C06p07090 Brassica napus HOM05D009661 ORTHO05D020160 3.6e-28 130.2 179 48.0
BcaB04g20772 Brassica carinata HOM05D008960 ORTHO05D093326 1.2e-26 125.2 127 58.3
C01p02030 Brassica napus HOM05D009661 ORTHO05D020160 2.4e-24 117.5 85 67.1
BcaC08g46605 Brassica carinata HOM05D008960 ORTHO05D093223 2.3e-22 110.9 144 50.7
C09p68970 Brassica napus HOM05D008960 ORTHO05D032503 3.7e-17 93.6 137 46.0
C09p47680 Brassica napus HOM05D007694 ORTHO05D023849 4.9e-17 93.2 83 57.8
BolC3t19742H Brassica oleracea HOM05D008960 ORTHO05D032503 6.4e-17 92.8 139 46.0
BcaC05g24287 Brassica carinata HOM05D008960 ORTHO05D032503 8.3e-17 92.4 139 45.3
C02p22430 Brassica napus HOM05D007694 ORTHO05D023849 1.4e-16 91.7 83 56.6
C04p38540 Brassica napus HOM05D007694 ORTHO05D023849 1.9e-16 91.3 84 54.8
C05p07860 Brassica napus HOM05D007694 ORTHO05D023849 2.4e-16 90.9 85 52.9
BolC6t38926H Brassica oleracea HOM05D009661 ORTHO05D018783 1.2e-15 88.6 243 33.3
C06p38270 Brassica napus HOM05D009661 ORTHO05D018783 2.1e-15 87.8 243 32.9
BolC6t37706H Brassica oleracea HOM05D009661 ORTHO05D020160 3.5e-15 87.0 128 43.8
BolC6t35800H Brassica oleracea HOM05D009661 ORTHO05D020160 7.8e-15 85.9 128 45.3
A07p16610 Brassica napus HOM05D009661 ORTHO05D018783 1.3e-14 85.1 55 76.4
C02p29800 Brassica napus HOM05D007694 ORTHO05D097335 1.3e-14 85.1 98 49.0
C08p15900 Brassica napus HOM05D021780 ORTHO05D021716 1.3e-14 85.1 71 69.0
BolC8t49214H Brassica oleracea HOM05D021780 ORTHO05D021716 1.3e-14 85.1 71 69.0
BcaC08g46608 Brassica carinata HOM05D008960 ORTHO05D094201 1.7e-14 84.7 108 50.0
BcaC01g05426 Brassica carinata HOM05D008960 ORTHO05D021862 2.3e-14 84.3 71 66.2
BcaC07g41369 Brassica carinata HOM05D011932 ORTHO05D024153 5.1e-14 83.2 164 40.2
C06p39950 Brassica napus HOM05D011932 ORTHO05D023872 5.1e-14 83.2 209 35.4
BcaC01g06122 Brassica carinata HOM05D008960 ORTHO05D021862 6.6e-14 82.8 139 42.4
BraA09t36250Z Brassica rapa HOM05D011932 ORTHO05D024153 8.6e-14 82.4 164 40.9
BraA07t31746Z Brassica rapa HOM05D008960 ORTHO05D108237 1.1e-13 82.0 59 66.1
BraA09t40506Z Brassica rapa HOM05D011932 ORTHO05D023872 1.9e-13 81.3 164 40.9
BcaC05g29803 Brassica carinata HOM05D007694 ORTHO05D019969 4.3e-13 80.1 185 35.7
C03p84280 Brassica napus HOM05D007694 ORTHO05D019969 9.5e-13 79.0 252 31.0
C03p14610 Brassica napus HOM05D007694 ORTHO05D019969 1.6e-12 78.2 244 31.6
BcaC03g17616 Brassica carinata HOM05D011932 ORTHO05D024153 3.6e-12 77.0 165 38.8
BcaNung05738 Brassica carinata HOM05D011932 ORTHO05D023872 4.7e-12 76.6 206 35.4
BolC2t11672H Brassica oleracea HOM05D011932 ORTHO05D023872 2.4e-11 74.3 165 38.2
BcaC01g00787 Brassica carinata HOM05D008960 ORTHO05D094263 4.0e-11 73.6 67 61.2
BcaB06g25872 Brassica carinata HOM05D011932 ORTHO05D094935 4.4e-10 70.1 136 42.6
BcaB02g07104 Brassica carinata HOM05D007694 ORTHO05D093325 7.6e-10 69.3 110 43.6
BcaB08g35388 Brassica carinata HOM05D007694 ORTHO05D003268 1.9e-08 64.7 145 37.9
BcaC01g01501 Brassica carinata HOM05D007694 ORTHO05D023849 2.4e-08 64.3 67 53.7
BolC4t22728H Brassica oleracea HOM05D011932 ORTHO05D023872 4.1e-08 63.5 136 39.7
C04p59470 Brassica napus HOM05D007694 ORTHO05D041000 6.6e-06 56.2 74 40.5


User provided reference genes

Program Settings