Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17804 Brassica carinata HOM05D003839 ORTHO05D003352 8.4e-75 283.5 133 100.0
BcaB08g35221 Brassica carinata HOM05D003839 ORTHO05D003352 6.3e-62 240.7 214 60.7
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-35 153.3 99 64.6
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 1.7e-35 152.9 193 40.9
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 6.5e-35 151.0 214 37.9
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 1.1e-34 150.2 214 37.4
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 2.5e-34 149.1 99 61.6
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 2.3e-32 142.5 93 62.4
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-32 141.7 179 43.0
BcaC05g25845 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-28 128.6 84 64.3
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.5e-26 123.2 109 49.5
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 1.9e-26 122.9 214 35.5
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 2.5e-26 122.5 98 54.1
A06p31430 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-23 113.6 86 55.8
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 3.4e-23 112.1 95 52.6
C06p24900 Brassica napus HOM05D010997 ORTHO05D003352 2.8e-22 109.0 86 53.5
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-22 109.0 95 51.6
C08p23400 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-21 107.1 83 55.4
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.4e-21 106.7 107 43.9
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 8.6e-19 97.4 111 36.9
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.9e-18 96.3 98 40.8
BcaC08g44872 Brassica carinata HOM05D003839 ORTHO05D003352 4.2e-18 95.1 98 48.0
BcaC08g44791 Brassica carinata HOM05D003839 ORTHO05D003352 5.5e-18 94.7 83 51.8
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-17 92.0 108 37.0
BraA06t25217Z Brassica rapa HOM05D003839 ORTHO05D003352 6.1e-17 91.3 70 57.1
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 8.0e-17 90.9 96 40.6
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 1.0e-16 90.5 96 40.6
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 3.0e-16 89.0 105 36.2
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 5.2e-16 88.2 77 48.1
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 6.8e-16 87.8 105 35.2
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 2.6e-15 85.9 98 37.8
BcaC03g14877 Brassica carinata HOM05D010997 ORTHO05D014498 7.5e-15 84.3 98 40.8
BolC8t47717H Brassica oleracea HOM05D003839 ORTHO05D003352 9.8e-15 84.0 68 50.0
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-14 82.8 108 32.4
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 34.3
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 32.4
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 32.4
BcaC07g37552 Brassica carinata HOM05D010997 ORTHO05D014498 2.2e-14 82.8 98 39.8
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 32.4
C02p23500 Brassica napus HOM05D010997 ORTHO05D014498 2.2e-14 82.8 98 39.8
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 32.4
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 32.4
C09p49180 Brassica napus HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 32.4
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 32.4
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 2.2e-14 82.8 105 32.4
A09p52190 Brassica napus HOM05D010997 ORTHO05D014498 2.8e-14 82.4 98 40.8
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-14 82.4 105 32.4
BraA09t36993Z Brassica rapa HOM05D010997 ORTHO05D014498 2.8e-14 82.4 98 40.8
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-14 82.0 98 33.7
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 6.3e-14 81.3 105 31.4
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 6.3e-14 81.3 105 31.4
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 8.3e-14 80.9 61 59.0
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-13 80.5 94 35.1
A09p13700 Brassica napus HOM05D009411 ORTHO05D014997 1.4e-13 80.1 101 32.7
A09p47020 Brassica napus HOM05D009411 ORTHO05D014997 1.4e-13 80.1 101 32.7
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-13 80.1 105 31.4
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 1.4e-13 80.1 105 31.4
BraA09t40167Z Brassica rapa HOM05D009411 ORTHO05D014997 1.4e-13 80.1 101 32.7
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-13 79.3 105 31.4
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-13 79.3 105 31.4
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-13 79.0 105 31.4
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 4.1e-13 78.6 105 31.4
C05p11490 Brassica napus HOM05D010997 ORTHO05D014498 5.4e-13 78.2 109 37.6
C07p23690 Brassica napus HOM05D010997 ORTHO05D014498 7.0e-13 77.8 98 38.8
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 9.2e-13 77.4 92 35.9
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 9.2e-13 77.4 101 31.7
C07p34600 Brassica napus HOM05D009411 ORTHO05D014997 9.2e-13 77.4 101 31.7
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 9.2e-13 77.4 105 33.3
BolC7t43992H Brassica oleracea HOM05D009411 ORTHO05D014997 9.2e-13 77.4 101 31.7
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 1.2e-12 77.0 101 31.7
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-12 76.6 92 34.8
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 1.6e-12 76.6 98 32.7
AT5G17167 Arabidopsis thaliana HOM05D003839 ORTHO05D003352 3.5e-12 75.5 83 33.7
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 4.5e-12 75.1 105 31.4
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-12 74.7 92 33.7
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 5.9e-12 74.7 105 31.4
C03p49680 Brassica napus HOM05D009411 ORTHO05D014997 1.0e-11 73.9 101 30.7
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-11 73.9 108 32.4
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-11 73.9 78 35.9
BolC3t17266H Brassica oleracea HOM05D009411 ORTHO05D014997 1.0e-11 73.9 101 30.7
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-11 73.6 105 31.4
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 1.3e-11 73.6 78 35.9
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 3.9e-11 72.0 93 33.3
BcaB02g06628 Brassica carinata HOM05D009411 ORTHO05D021732 1.5e-10 70.1 81 34.6
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-10 70.1 74 36.5
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 1.9e-10 69.7 102 30.4
BcaC06g33962 Brassica carinata HOM05D009411 ORTHO05D003352 2.5e-10 69.3 101 28.7
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 4.3e-10 68.6 96 29.2
BcaC06g34649 Brassica carinata HOM05D010997 ORTHO05D032638 9.5e-10 67.4 56 51.8
C07p26140 Brassica napus HOM05D010997 ORTHO05D032638 9.5e-10 67.4 56 51.8
BolC7t43140H Brassica oleracea HOM05D010997 ORTHO05D032638 9.5e-10 67.4 56 51.8
A06p08980 Brassica napus HOM05D010997 ORTHO05D014498 1.6e-09 66.6 85 37.6
C04p18360 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-09 66.6 94 31.9
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 2.8e-09 65.9 84 34.5
C01p35470 Brassica napus HOM05D003839 ORTHO05D021732 2.8e-09 65.9 74 37.8
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 2.8e-09 65.9 84 34.5
BolC1t03505H Brassica oleracea HOM05D003839 ORTHO05D021732 2.8e-09 65.9 74 37.8
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-09 64.7 86 31.4
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.1e-09 64.7 65 43.1
BcaC05g25843 Brassica carinata HOM05D003839 ORTHO05D003352 1.0e-08 63.9 94 31.9
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-08 62.0 105 27.6
BraA01t01719Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-07 60.5 82 29.3
A09p23690 Brassica napus HOM05D009411 ORTHO05D014107 5.8e-07 58.2 74 31.1
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-07 57.8 63 38.1
BraA01t02910Z Brassica rapa HOM05D003839 ORTHO05D021732 7.5e-07 57.8 74 36.5
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 9.8e-07 57.4 103 28.2
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 9.8e-07 57.4 103 28.2
A03p06230 Brassica napus HOM05D009411 ORTHO05D014107 1.7e-06 56.6 74 31.1
A03p13170 Brassica napus HOM05D009411 ORTHO05D014107 1.7e-06 56.6 74 31.1
BcaC04g22403 Brassica carinata HOM05D009411 ORTHO05D014107 2.2e-06 56.2 71 32.4
BcaB05g23784 Brassica carinata HOM05D003839 ORTHO05D003352 2.9e-06 55.8 90 28.9
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-06 55.1 103 27.2


User provided reference genes

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