Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17782 Brassica carinata HOM05D012943 ORTHO05D091829 3.0e-210 734.9 376 100.0
BcaB07g33162 Brassica carinata HOM05D012943 ORTHO05D010571 1.3e-141 506.9 326 81.6
BcaB07g33136 Brassica carinata HOM05D012943 ORTHO05D094356 2.0e-121 439.9 263 87.8
BcaB06g27016 Brassica carinata HOM05D012943 ORTHO05D093937 4.5e-73 279.3 334 53.0
BcaB04g17042 Brassica carinata HOM05D012943 ORTHO05D092635 1.6e-70 270.8 154 90.3
BcaC08g43129 Brassica carinata HOM05D012943 ORTHO05D039056 1.2e-46 191.4 182 61.0
C06p04030 Brassica napus HOM05D012943 ORTHO05D039056 2.0e-44 184.1 292 43.5
BcaB08g35157 Brassica carinata HOM05D001224 ORTHO05D010571 1.1e-39 168.3 332 38.0
BcaC01g02092 Brassica carinata HOM05D012943 ORTHO05D091808 9.8e-36 155.2 156 57.1
BcaC06g36115 Brassica carinata HOM05D012943 ORTHO05D032960 2.7e-33 147.1 141 59.6
C07p07620 Brassica napus HOM05D012943 ORTHO05D032960 2.7e-33 147.1 141 59.6
BolC7t41183H Brassica oleracea HOM05D012943 ORTHO05D032960 2.7e-33 147.1 141 59.6
C03p64930 Brassica napus HOM05D002776 ORTHO05D000395 3.7e-27 126.7 151 49.0
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 7.0e-26 122.5 366 30.9
A09p32050 Brassica napus HOM05D001224 ORTHO05D016111 4.3e-23 113.2 223 36.3
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 9.5e-23 112.1 312 30.8
C03p71030 Brassica napus HOM05D001224 ORTHO05D016111 1.6e-22 111.3 297 32.3
C03p68610 Brassica napus HOM05D000675 ORTHO05D000395 2.8e-22 110.5 115 53.9
BolC3t19120H Brassica oleracea HOM05D000675 ORTHO05D000395 2.8e-22 110.5 115 53.9
BcaB05g22948 Brassica carinata HOM05D001224 ORTHO05D010571 8.0e-22 109.0 148 43.2
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 1.8e-21 107.8 314 29.0
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 2.3e-21 107.5 225 39.1
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 1.2e-20 105.1 285 29.1
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 1.5e-20 104.8 382 28.0
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 2.2e-19 100.9 334 29.3
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 8.3e-19 99.0 438 28.1
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 8.3e-19 99.0 314 27.7
C07p12920 Brassica napus HOM05D001224 ORTHO05D016739 1.1e-18 98.6 344 29.7
BcaC05g27713 Brassica carinata HOM05D001224 ORTHO05D024276 5.4e-18 96.3 143 43.4
BolC3t18754H Brassica oleracea HOM05D002776 ORTHO05D000395 2.0e-17 94.4 126 46.0
BcaC06g35526 Brassica carinata HOM05D002776 ORTHO05D012331 3.5e-17 93.6 376 26.1
C04p09810 Brassica napus HOM05D002702 ORTHO05D003416 6.0e-17 92.8 308 29.5
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 2.3e-16 90.9 366 26.2
BcaC07g37922 Brassica carinata HOM05D001224 ORTHO05D016739 8.6e-16 89.0 131 38.2
A09p21550 Brassica napus HOM05D023185 ORTHO05D012331 8.6e-16 89.0 145 35.9
BraA09t37754Z Brassica rapa HOM05D001224 ORTHO05D012331 8.6e-16 89.0 145 35.9
BcaB01g02585 Brassica carinata HOM05D001224 ORTHO05D000395 1.1e-15 88.6 228 33.8
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 1.1e-15 88.6 123 41.5
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 1.9e-15 87.8 144 40.3
BcaC02g11927 Brassica carinata HOM05D002702 ORTHO05D003416 9.5e-15 85.5 302 28.1
C04p09720 Brassica napus HOM05D001224 ORTHO05D016111 1.2e-14 85.1 231 30.7
BolC5t32442H Brassica oleracea HOM05D001224 ORTHO05D024276 2.1e-14 84.3 205 36.6
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 3.6e-14 83.6 213 31.9
C07p11380 Brassica napus HOM05D001379 ORTHO05D012331 4.7e-14 83.2 144 36.8
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 6.2e-14 82.8 136 39.7
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 6.2e-14 82.8 344 27.0
BcaB06g26681 Brassica carinata HOM05D001224 ORTHO05D016739 8.1e-14 82.4 117 44.4
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 8.1e-14 82.4 327 29.1
BcaC02g11069 Brassica carinata HOM05D002776 ORTHO05D012331 8.9e-13 79.0 343 26.5
BcaC05g27135 Brassica carinata HOM05D001224 ORTHO05D010571 8.9e-13 79.0 229 31.0
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 1.2e-12 78.6 213 31.5
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 2.6e-12 77.4 213 31.9
BcaC04g20542 Brassica carinata HOM05D002776 ORTHO05D012331 9.8e-12 75.5 343 27.1
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 1.3e-11 75.1 253 29.2
BcaB04g18242 Brassica carinata HOM05D001224 ORTHO05D010571 1.7e-11 74.7 163 36.8
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 1.7e-11 74.7 339 28.3
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 2.2e-11 74.3 225 30.2
BcaB07g33904 Brassica carinata HOM05D001224 ORTHO05D003044 2.4e-10 70.9 107 43.0
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 3.2e-10 70.5 256 30.1
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 4.1e-10 70.1 234 29.5
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 5.4e-10 69.7 123 37.4
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 5.4e-10 69.7 137 35.0
BcaC06g36326 Brassica carinata HOM05D002776 ORTHO05D012331 7.1e-10 69.3 293 26.6
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 9.2e-10 68.9 123 37.4
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 1.2e-09 68.6 123 38.2
BcaB01g01037 Brassica carinata HOM05D001224 ORTHO05D010571 1.6e-09 68.2 151 33.1
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 2.7e-09 67.4 137 35.8
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 2.7e-09 67.4 123 36.6
C07p04250 Brassica napus HOM05D001224 ORTHO05D039145 2.7e-09 67.4 312 26.9
C05p30230 Brassica napus HOM05D001224 ORTHO05D010571 7.8e-09 65.9 139 34.5
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 1.3e-08 65.1 313 28.1
BolC4t23819H Brassica oleracea HOM05D002776 ORTHO05D000395 1.3e-08 65.1 147 30.6
C02p39490 Brassica napus HOM05D001224 ORTHO05D012331 1.7e-08 64.7 263 25.1
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 2.3e-08 64.3 217 27.6
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 2.3e-08 64.3 119 36.1
BraA03t15283Z Brassica rapa HOM05D001224 ORTHO05D010571 2.3e-08 64.3 120 36.7
C07p06240 Brassica napus HOM05D001498 ORTHO05D016111 3.0e-08 63.9 129 36.4
BolC7t41042H Brassica oleracea HOM05D001224 ORTHO05D016111 3.0e-08 63.9 69 49.3
C04p18100 Brassica napus HOM05D033568 ORTHO05D027387 3.9e-08 63.5 70 54.3
BolC4t23362H Brassica oleracea HOM05D033568 ORTHO05D027387 3.9e-08 63.5 70 54.3
BolC5t33158H Brassica oleracea HOM05D001224 ORTHO05D010571 3.9e-08 63.5 145 33.8
BcaC03g16637 Brassica carinata HOM05D012943 ORTHO05D027387 5.1e-08 63.2 153 37.3
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 6.6e-08 62.8 123 36.6
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 6.6e-08 62.8 137 33.6
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 8.6e-08 62.4 135 34.1
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 1.1e-07 62.0 271 27.7
C02p44710 Brassica napus HOM05D033568 ORTHO05D027387 1.1e-07 62.0 86 48.8
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 1.1e-07 62.0 123 35.8
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 1.9e-07 61.2 91 38.5
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 2.5e-07 60.8 143 32.9
C02p15640 Brassica napus HOM05D001224 ORTHO05D010571 2.5e-07 60.8 91 38.5
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 3.3e-07 60.5 91 38.5
BcaB05g23791 Brassica carinata HOM05D001224 ORTHO05D010571 4.3e-07 60.1 77 46.8
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 5.6e-07 59.7 288 28.5
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 7.3e-07 59.3 123 35.0
C09p45500 Brassica napus HOM05D001498 ORTHO05D016111 9.5e-07 58.9 140 32.9
BolC9t57418H Brassica oleracea HOM05D001224 ORTHO05D003044 1.2e-06 58.5 133 33.8
BcaC02g11933 Brassica carinata HOM05D001224 ORTHO05D016111 3.6e-06 57.0 258 25.2
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 3.6e-06 57.0 153 30.7
C06p04810 Brassica napus HOM05D001224 ORTHO05D010571 8.1e-06 55.8 91 36.3


User provided reference genes

Program Settings