Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 4.9e-103 377.9 197 100.0
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 1.7e-63 246.5 227 63.9
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 1.9e-46 189.9 168 67.3
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 4.6e-45 185.3 230 50.0
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-44 184.1 250 47.6
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 1.9e-43 179.9 230 50.4
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-43 179.1 247 46.2
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 4.3e-43 178.7 174 60.3
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 3.7e-42 175.6 230 49.6
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-41 174.1 247 45.3
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-41 174.1 132 68.9
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-41 174.1 247 46.2
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.8e-41 173.3 144 64.6
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-41 173.3 129 70.5
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 6.9e-41 171.4 165 59.4
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 6.9e-41 171.4 165 59.4
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.6e-40 169.5 164 61.6
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 4.5e-40 168.7 149 63.1
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 5.8e-40 168.3 142 64.1
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 1.3e-39 167.2 170 57.6
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-39 167.2 155 60.6
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 3.2e-38 162.5 167 58.1
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 7.9e-37 157.9 155 58.1
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 1.3e-36 157.1 155 58.7
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.8e-36 156.8 160 58.1
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 3.0e-36 156.0 247 44.1
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 3.0e-36 156.0 191 52.9
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 1.9e-35 153.3 241 44.0
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 3.3e-35 152.5 164 53.7
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 3.3e-35 152.5 164 53.7
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 4.3e-35 152.1 227 43.2
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 7.4e-35 151.4 166 53.0
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 9.7e-35 151.0 164 53.7
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 9.7e-35 151.0 164 53.7
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 1.3e-34 150.6 139 59.0
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 2.2e-34 149.8 166 52.4
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 2.4e-33 146.4 164 52.4
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 3.2e-30 136.0 223 39.5
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 5.5e-30 135.2 125 59.2
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-29 132.1 124 59.7
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 6.1e-29 131.7 124 58.9
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-28 130.6 124 59.7
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 1.8e-28 130.2 108 61.1
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 6.7e-28 128.3 122 59.0
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-26 124.0 192 45.3
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 4.8e-26 122.1 139 51.8
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 6.3e-26 121.7 135 54.1
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 9.1e-25 117.9 84 70.2
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.5e-24 117.1 142 52.8
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 1.3e-23 114.0 90 63.3
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 2.2e-23 113.2 146 51.4
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 2.9e-23 112.8 165 46.7
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 4.2e-22 109.0 171 43.9
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 5.5e-22 108.6 164 45.7
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 7.2e-22 108.2 97 59.8
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 3.0e-20 102.8 218 37.2
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 2.0e-19 100.1 140 40.7
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 3.3e-19 99.4 152 46.7
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 9.7e-19 97.8 94 60.6
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.3e-18 97.4 94 59.6
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.3e-18 97.4 94 59.6
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 3.7e-18 95.9 190 38.9
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 6.3e-18 95.1 141 46.1
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 6.3e-18 95.1 141 46.1
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-16 90.5 162 40.7
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 3.5e-16 89.4 152 41.4
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 4.5e-16 89.0 101 51.5
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 4.5e-16 89.0 165 40.0
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 5.9e-16 88.6 215 34.9
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 1.7e-15 87.0 131 44.3
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-15 87.0 80 62.5
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 3.8e-15 85.9 83 63.9
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 3.8e-15 85.9 160 40.6
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 6.5e-15 85.1 136 41.9
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 1.9e-14 83.6 215 32.6
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 4.2e-14 82.4 74 63.5
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 7.2e-14 81.6 135 45.2
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.2e-13 80.9 111 48.6
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 1.2e-13 80.9 215 35.3
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 1.6e-13 80.5 131 44.3
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 2.1e-13 80.1 131 44.3
BcaNung01893 Brassica carinata HOM05D008735 ORTHO05D008395 2.7e-13 79.7 67 68.7
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 3.6e-13 79.3 143 44.1
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 3.6e-13 79.3 105 45.7
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 3.6e-13 79.3 116 44.0
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 3.6e-13 79.3 105 45.7
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 4.7e-13 79.0 138 42.0
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 6.1e-13 78.6 81 60.5
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 6.1e-13 78.6 106 45.3
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 8.0e-13 78.2 68 63.2
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 8.0e-13 78.2 95 47.4
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 8.0e-13 78.2 132 43.9
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-12 76.6 81 58.0
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 2.3e-12 76.6 104 46.2
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 3.9e-12 75.9 104 45.2
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 3.9e-12 75.9 96 50.0
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-12 75.5 52 67.3
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 5.2e-12 75.5 138 41.3
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 6.7e-12 75.1 138 39.9
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 8.8e-12 74.7 79 55.7
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 1.1e-11 74.3 94 54.3
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 1.5e-11 73.9 82 56.1
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.5e-11 73.9 92 50.0
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-11 73.9 68 57.4
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-11 73.6 68 57.4
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 3.3e-11 72.8 76 55.3
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 3.3e-11 72.8 68 57.4
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 4.4e-11 72.4 69 60.9
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-11 72.4 69 60.9
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 7.4e-11 71.6 68 55.9
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 9.7e-11 71.2 108 40.7
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-10 70.9 44 72.7
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 2.2e-10 70.1 142 38.7
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 2.2e-10 70.1 42 73.8
BcaC06g35975 Brassica carinata HOM05D004128 ORTHO05D008395 4.8e-10 68.9 74 56.8
C03p79100 Brassica napus HOM05D008735 ORTHO05D101655 6.3e-10 68.6 113 45.1
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 8.2e-10 68.2 105 47.6
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 8.2e-10 68.2 199 32.2
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 8.2e-10 68.2 136 38.2
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 3.1e-09 66.2 165 32.7
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 4.1e-09 65.9 198 30.3
BcaB03g15896 Brassica carinata HOM05D008735 ORTHO05D092493 7.0e-09 65.1 50 72.0
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 7.0e-09 65.1 139 36.7
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 9.1e-09 64.7 100 48.0
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 9.1e-09 64.7 198 30.8
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 2.6e-08 63.2 51 66.7
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 3.5e-08 62.8 165 32.7
C09p44260 Brassica napus HOM05D008735 ORTHO05D016012 4.5e-08 62.4 120 41.7
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 7.7e-08 61.6 57 52.6
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 2.9e-07 59.7 155 34.8
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 2.9e-07 59.7 57 59.6
BolC5t32922H Brassica oleracea HOM05D004128 ORTHO05D033837 2.9e-07 59.7 80 52.5
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 5.0e-07 58.9 106 36.8
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-06 57.4 56 57.1
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 1.5e-06 57.4 56 57.1
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 9.4e-06 54.7 138 37.0


User provided reference genes

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