Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17693 Brassica carinata HOM05D054536 ORTHO05D039794 2.0e-49 198.7 98 100.0
BolC3t19838H Brassica oleracea HOM05D054536 ORTHO05D039794 1.3e-11 73.2 47 78.7
BcaC01g01594 Brassica carinata HOM05D002175 ORTHO05D002303 1.1e-07 60.1 26 96.2
BcaC06g35426 Brassica carinata HOM05D002175 ORTHO05D002303 1.1e-07 60.1 26 96.2
C07p16320 Brassica napus HOM05D002175 ORTHO05D002303 1.1e-07 60.1 26 96.2
BolC7t42125H Brassica oleracea HOM05D002175 ORTHO05D002303 1.1e-07 60.1 26 96.2
Carub.0001s2757 Capsella rubella HOM05D002175 ORTHO05D002303 1.1e-07 60.1 26 96.2
A07p10720 Brassica napus HOM05D002175 ORTHO05D002303 1.9e-07 59.3 31 83.9
BraA07t28867Z Brassica rapa HOM05D002175 ORTHO05D002303 1.9e-07 59.3 31 83.9
Thhalv10006794m.g Eutrema salsugineum HOM05D002175 ORTHO05D002303 3.2e-07 58.5 25 96.0
BcaB03g12157 Brassica carinata HOM05D002175 ORTHO05D002303 4.2e-07 58.2 25 96.0
BcaC01g00103 Brassica carinata HOM05D002175 ORTHO05D002303 4.2e-07 58.2 25 96.0
A08p25100 Brassica napus HOM05D002175 ORTHO05D002303 4.2e-07 58.2 25 96.0
C03p75810 Brassica napus HOM05D002175 ORTHO05D002303 4.2e-07 58.2 25 96.0
BolC3t19839H Brassica oleracea HOM05D002175 ORTHO05D002303 4.2e-07 58.2 25 96.0
CARHR028700 Cardamine hirsuta HOM05D002175 ORTHO05D002303 4.2e-07 58.2 25 96.0
AL1G43160 Arabidopsis lyrata HOM05D002175 ORTHO05D002303 1.2e-06 56.6 25 92.0
BcaB07g32529 Brassica carinata HOM05D002175 ORTHO05D002303 1.2e-06 56.6 25 92.0
BraA08t34465Z Brassica rapa HOM05D002175 ORTHO05D002303 1.2e-06 56.6 25 92.0
BcaB03g13890 Brassica carinata HOM05D002175 ORTHO05D002303 1.6e-06 56.2 25 92.0
C03p74260 Brassica napus HOM05D002175 ORTHO05D002303 1.6e-06 56.2 25 92.0
Sp1g25300 Schrenkiella parvula HOM05D002175 ORTHO05D002303 1.6e-06 56.2 25 92.0
Sp1g25310 Schrenkiella parvula HOM05D002175 ORTHO05D002303 1.6e-06 56.2 25 92.0
AT1G29350 Arabidopsis thaliana HOM05D002175 ORTHO05D002303 2.7e-06 55.5 26 88.5
AT1G29370 Arabidopsis thaliana HOM05D002175 ORTHO05D002303 2.7e-06 55.5 26 88.5
C05p28140 Brassica napus HOM05D002175 ORTHO05D002303 6.1e-06 54.3 25 88.0


User provided reference genes

Program Settings