Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17682 Brassica carinata HOM05D000675 ORTHO05D019850 6.6e-273 943.7 583 100.0
BcaB06g27042 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-72 277.7 528 39.2
BcaB04g17831 Brassica carinata HOM05D000675 ORTHO05D000395 3.1e-65 253.8 204 80.9
BcaB01g01443 Brassica carinata HOM05D000675 ORTHO05D000395 2.0e-59 234.6 521 37.0
BcaB06g28324 Brassica carinata HOM05D000675 ORTHO05D017590 5.0e-55 219.9 285 49.1
BcaB01g01578 Brassica carinata HOM05D000675 ORTHO05D013785 3.4e-51 207.2 521 34.9
BcaB03g16231 Brassica carinata HOM05D000675 ORTHO05D000395 1.8e-44 184.9 355 39.2
BcaC02g12835 Brassica carinata HOM05D000675 ORTHO05D000395 1.4e-36 158.7 570 35.1
C03p13390 Brassica napus HOM05D027379 ORTHO05D019850 1.5e-30 138.7 104 65.4
BolC3t13800H Brassica oleracea HOM05D027379 ORTHO05D019850 3.3e-30 137.5 104 63.5
C04p39370 Brassica napus HOM05D000675 ORTHO05D000395 1.4e-28 132.1 347 39.5
BolC4t25504H Brassica oleracea HOM05D000675 ORTHO05D000395 1.7e-26 125.2 558 33.0
BcaC02g09163 Brassica carinata HOM05D000675 ORTHO05D000395 1.7e-23 115.2 553 33.1
BraA09t37556Z Brassica rapa HOM05D000675 ORTHO05D020104 3.3e-22 110.9 588 26.4
A09p19400 Brassica napus HOM05D000675 ORTHO05D020104 1.2e-21 109.0 580 25.9
BraA01t02215Z Brassica rapa HOM05D000675 ORTHO05D003044 8.9e-20 102.8 554 25.1
BcaB06g26024 Brassica carinata HOM05D000675 ORTHO05D019850 1.5e-19 102.1 75 65.3
A01p22900 Brassica napus HOM05D000675 ORTHO05D003044 5.8e-19 100.1 492 27.4
A09p33950 Brassica napus HOM05D000675 ORTHO05D000395 2.9e-18 97.8 544 25.9
C02p54990 Brassica napus HOM05D000675 ORTHO05D000395 3.8e-18 97.4 72 63.9
BolC4t27258H Brassica oleracea HOM05D000675 ORTHO05D020104 1.2e-16 92.4 621 23.7
BcaB04g18225 Brassica carinata HOM05D000675 ORTHO05D013785 1.6e-16 92.0 541 26.4
C01p43180 Brassica napus HOM05D000675 ORTHO05D013785 1.3e-15 89.0 584 26.4
BolC2t09927H Brassica oleracea HOM05D000675 ORTHO05D018598 1.3e-15 89.0 126 40.5
BraA07t28402Z Brassica rapa HOM05D000675 ORTHO05D020104 1.3e-15 89.0 309 28.5
BcaC09g49047 Brassica carinata HOM05D000675 ORTHO05D000395 2.3e-15 88.2 560 26.2
BcaB01g04897 Brassica carinata HOM05D000675 ORTHO05D000395 3.0e-15 87.8 539 25.4
BolC1t04264H Brassica oleracea HOM05D000675 ORTHO05D013785 3.9e-15 87.4 576 25.9
C05p19710 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-14 85.9 598 25.9
BolC5t30672H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-14 85.9 605 26.3
A07p06060 Brassica napus HOM05D000675 ORTHO05D020104 1.5e-14 85.5 132 38.6
C04p15800 Brassica napus HOM05D000675 ORTHO05D000395 5.6e-14 83.6 155 38.7
A05p23490 Brassica napus HOM05D000675 ORTHO05D000395 1.2e-13 82.4 123 39.8
C05p32160 Brassica napus HOM05D000675 ORTHO05D023661 1.2e-13 82.4 118 42.4
BolC5t31948H Brassica oleracea HOM05D000675 ORTHO05D023661 1.2e-13 82.4 118 42.4
BraA05t21216Z Brassica rapa HOM05D000675 ORTHO05D000395 1.2e-13 82.4 123 39.8
C04p10850 Brassica napus HOM05D000675 ORTHO05D020104 3.6e-13 80.9 123 38.2
BolC7t42635H Brassica oleracea HOM05D000675 ORTHO05D000395 4.7e-13 80.5 123 40.7
BolC3t19417H Brassica oleracea HOM05D000675 ORTHO05D018598 8.1e-13 79.7 128 39.1
BolC8t48131H Brassica oleracea HOM05D000675 ORTHO05D003044 8.1e-13 79.7 456 26.8
BolC8t48427H Brassica oleracea HOM05D000675 ORTHO05D000395 1.1e-12 79.3 123 39.8
BraA09t38942Z Brassica rapa HOM05D000675 ORTHO05D003044 1.1e-12 79.3 521 25.0
BcaC09g49238 Brassica carinata HOM05D000675 ORTHO05D020104 1.4e-12 79.0 301 27.2
BcaC01g01855 Brassica carinata HOM05D000675 ORTHO05D000395 2.4e-12 78.2 133 38.3
BcaB06g26025 Brassica carinata HOM05D000675 ORTHO05D013785 5.2e-12 77.0 272 30.1
C04p39120 Brassica napus HOM05D000675 ORTHO05D013785 6.9e-12 76.6 284 30.6
BcaC07g37751 Brassica carinata HOM05D000675 ORTHO05D000395 1.5e-11 75.5 458 25.5
BolC4t25484H Brassica oleracea HOM05D000675 ORTHO05D003044 2.2e-10 71.6 106 41.5
BraA07t28286Z Brassica rapa HOM05D000675 ORTHO05D000395 2.9e-10 71.2 531 25.4
BcaC08g43526 Brassica carinata HOM05D000675 ORTHO05D000395 8.4e-10 69.7 126 36.5
BcaC06g34976 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-09 69.3 545 24.6
BcaB01g01752 Brassica carinata HOM05D000675 ORTHO05D003044 3.2e-09 67.8 118 34.7
BcaC08g43027 Brassica carinata HOM05D000675 ORTHO05D003044 9.3e-09 66.2 109 36.7
BolC6t35994H Brassica oleracea HOM05D000675 ORTHO05D000395 9.3e-09 66.2 90 37.8
BcaC03g17530 Brassica carinata HOM05D000675 ORTHO05D003044 2.7e-08 64.7 438 32.9
BolC5t29654H Brassica oleracea HOM05D000675 ORTHO05D000395 4.6e-08 63.9 85 37.6
BraA02t07854Z Brassica rapa HOM05D000675 ORTHO05D003044 6.0e-08 63.5 463 24.6
C05p17010 Brassica napus HOM05D000675 ORTHO05D000395 1.3e-07 62.4 96 37.5
A10p26180 Brassica napus HOM05D000675 ORTHO05D000395 2.3e-07 61.6 123 36.6
BolC5t31949H Brassica oleracea HOM05D000675 ORTHO05D042692 3.0e-07 61.2 329 29.5
C05p32170 Brassica napus HOM05D000675 ORTHO05D042692 3.9e-07 60.8 290 31.4
C02p54980 Brassica napus HOM05D000675 ORTHO05D003044 6.6e-07 60.1 185 39.5
BcaC02g10974 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-06 59.3 109 37.6
BcaC09g50290 Brassica carinata HOM05D000675 ORTHO05D000395 1.1e-06 59.3 553 23.7
C04p22730 Brassica napus HOM05D000675 ORTHO05D000395 1.1e-06 59.3 109 37.6
BolC4t25485H Brassica oleracea HOM05D000675 ORTHO05D000395 1.9e-06 58.5 41 63.4
BcaB02g06469 Brassica carinata HOM05D000675 ORTHO05D017590 2.5e-06 58.2 40 57.5
BcaC08g44724 Brassica carinata HOM05D000675 ORTHO05D000395 4.3e-06 57.4 569 23.7
C06p22620 Brassica napus HOM05D000675 ORTHO05D013785 4.3e-06 57.4 315 26.7
BraA01t02203Z Brassica rapa HOM05D000675 ORTHO05D003044 7.3e-06 56.6 467 23.6
BcaC03g16162 Brassica carinata HOM05D000675 ORTHO05D018598 9.6e-06 56.2 97 38.1


User provided reference genes

Program Settings