Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17676 Brassica carinata HOM05D009356 ORTHO05D010353 1.8e-194 682.6 383 100.0
BcaB08g35272 Brassica carinata HOM05D009356 ORTHO05D010353 9.9e-161 570.5 334 98.5
BcaB08g35697 Brassica carinata HOM05D009356 ORTHO05D010353 2.3e-56 223.8 227 48.0
BcaB02g11029 Brassica carinata HOM05D009356 ORTHO05D010353 9.9e-44 181.8 88 97.7
C02p15580 Brassica napus HOM05D009356 ORTHO05D010353 8.7e-32 142.1 222 30.6
C07p06990 Brassica napus HOM05D009356 ORTHO05D010353 8.7e-32 142.1 222 31.1
C04p15140 Brassica napus HOM05D009356 ORTHO05D010353 1.1e-31 141.7 222 30.6
C02p25050 Brassica napus HOM05D009356 ORTHO05D010353 7.4e-31 139.0 222 29.7
BcaC05g28711 Brassica carinata HOM05D009356 ORTHO05D010353 3.4e-28 130.2 287 28.6
Sp6g09590 Schrenkiella parvula HOM05D009356 ORTHO05D010353 3.8e-27 126.7 316 29.4
BcaC03g14879 Brassica carinata HOM05D009356 ORTHO05D010353 3.2e-26 123.6 249 30.5
BcaC02g10021 Brassica carinata HOM05D009356 ORTHO05D010353 7.2e-26 122.5 289 26.6
C07p25740 Brassica napus HOM05D009356 ORTHO05D010353 3.8e-19 100.1 186 30.1
BcaC05g26363 Brassica carinata HOM05D009356 ORTHO05D010353 2.5e-18 97.4 293 25.6
BcaB06g26813 Brassica carinata HOM05D012753 ORTHO05D010353 7.2e-18 95.9 352 30.4
BcaC04g22051 Brassica carinata HOM05D009356 ORTHO05D010353 1.2e-17 95.1 176 26.1
EL10Ac6g13718 Beta vulgaris HOM05D008347 ORTHO05D006373 1.8e-16 91.3 238 29.0
EL10Ac8g20298 Beta vulgaris HOM05D008347 ORTHO05D006373 1.8e-16 91.3 238 29.0
EL10Ac8g20301 Beta vulgaris HOM05D008347 ORTHO05D006373 1.8e-16 91.3 238 29.0
EL10Ac4g08035 Beta vulgaris HOM05D008347 ORTHO05D006373 2.3e-16 90.9 238 29.4
BcaC02g11800 Brassica carinata HOM05D009356 ORTHO05D010353 6.7e-16 89.4 233 27.9
Sp1g28960 Schrenkiella parvula HOM05D009356 ORTHO05D010353 6.7e-16 89.4 124 37.9
Sp2g06700 Schrenkiella parvula HOM05D009356 ORTHO05D010353 7.4e-15 85.9 137 32.8
AL2G19060 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 1.3e-14 85.1 240 22.9
AL9U11180 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 4.8e-14 83.2 203 24.6
Sp7g10380 Schrenkiella parvula HOM05D009356 ORTHO05D011005 6.3e-14 82.8 147 30.6
AL126U10020 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 1.4e-13 81.6 170 27.1
AL3G34330 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 1.4e-13 81.6 170 27.1
AUR62040645 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.0e-12 77.8 169 29.6
AUR62034037 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.9e-12 76.3 169 29.0
Sp2g06710 Schrenkiella parvula HOM05D009356 ORTHO05D010353 1.0e-11 75.5 144 32.6
AUR62030750 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.8e-11 73.6 169 28.4
Sp5g17470 Schrenkiella parvula HOM05D009356 ORTHO05D010353 3.8e-11 73.6 112 35.7
AUR62039428 Chenopodium quinoa HOM05D008347 ORTHO05D006373 6.5e-11 72.8 165 29.1
EL10Ac3g06674 Beta vulgaris HOM05D009474 ORTHO05D006373 8.5e-11 72.4 172 27.9
AUR62036520 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.1e-10 72.0 184 28.3
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.5e-10 70.9 184 28.3
AUR62013905 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.2e-10 70.5 184 28.3
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 3.2e-10 70.5 153 25.5
EL10Ac2g03310 Beta vulgaris HOM05D009474 ORTHO05D006373 4.2e-10 70.1 172 27.9
Ah.01g012380 Amaranthus hybridus HOM05D009474 ORTHO05D006373 5.5e-10 69.7 164 27.4
EL10Ac8g19408 Beta vulgaris HOM05D009474 ORTHO05D006373 5.5e-10 69.7 172 27.9
EL10Ac9g20913 Beta vulgaris HOM05D009474 ORTHO05D006373 5.5e-10 69.7 172 27.9
EL10As24g24232 Beta vulgaris HOM05D009474 ORTHO05D006373 5.5e-10 69.7 172 27.9
THA.LOC104804846 Tarenaya hassleriana HOM05D062396 ORTHO05D006373 1.2e-09 68.6 173 24.9
EL10Ac2g03104 Beta vulgaris HOM05D009474 ORTHO05D006373 1.6e-09 68.2 172 27.3
EL10Ac4g08425 Beta vulgaris HOM05D009474 ORTHO05D006373 1.6e-09 68.2 172 27.9
EL10Ac7g16650 Beta vulgaris HOM05D009474 ORTHO05D006373 1.6e-09 68.2 172 27.3
EL10Ac6g14023 Beta vulgaris HOM05D009474 ORTHO05D006373 2.1e-09 67.8 172 27.3
EL10Ac6g14024 Beta vulgaris HOM05D009474 ORTHO05D006373 2.1e-09 67.8 172 27.3
EL10Ac4g08745 Beta vulgaris HOM05D009474 ORTHO05D006373 3.6e-09 67.0 172 26.7
EL10Ac5g11109 Beta vulgaris HOM05D009474 ORTHO05D006373 3.6e-09 67.0 172 26.7
Sp3g26020 Schrenkiella parvula HOM05D009356 ORTHO05D011005 4.7e-09 66.6 223 27.4
EL10Ac3g06648 Beta vulgaris HOM05D009474 ORTHO05D006373 6.1e-09 66.2 171 28.1
EL10Ac3g07114 Beta vulgaris HOM05D009952 ORTHO05D011763 7.9e-09 65.9 207 25.1
EL10Ac9g20896 Beta vulgaris HOM05D009474 ORTHO05D006373 7.9e-09 65.9 164 28.0
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.9e-09 65.9 184 27.2
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 1.4e-08 65.1 287 24.4
EL10Ac3g05933 Beta vulgaris HOM05D009952 ORTHO05D011763 1.8e-08 64.7 207 24.6
Sp6g08840 Schrenkiella parvula HOM05D007883 ORTHO05D010332 1.8e-08 64.7 196 28.1
EL10Ac1g01682 Beta vulgaris HOM05D009474 ORTHO05D006373 2.3e-08 64.3 164 27.4
AUR62006881 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.3e-08 64.3 167 24.6
Aa31LG2G17320 Aethionema arabicum HOM05D003849 ORTHO05D002482 3.9e-08 63.5 194 28.9
EL10Ac1g01483 Beta vulgaris HOM05D008347 ORTHO05D006373 6.7e-08 62.8 119 31.9
VMungo1383G0244 Vigna mungo HOM05D008347 ORTHO05D006373 6.7e-08 62.8 130 26.9
EL10Ac4g08488 Beta vulgaris HOM05D009474 ORTHO05D006373 8.8e-08 62.4 164 26.8
EL10Ac8g20300 Beta vulgaris HOM05D008347 ORTHO05D006373 8.8e-08 62.4 238 23.9
EL10Ac8g19716 Beta vulgaris HOM05D009474 ORTHO05D006373 1.1e-07 62.0 172 26.7
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.1e-07 62.0 139 28.1
THA.LOC104825741 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 1.1e-07 62.0 244 21.7
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 1.5e-07 61.6 219 22.4
EL10Ac4g08475 Beta vulgaris HOM05D009474 ORTHO05D006373 1.5e-07 61.6 164 26.8
EL10Ac3g06751 Beta vulgaris HOM05D008347 ORTHO05D006373 2.6e-07 60.8 165 26.1
EL10Ac5g11532 Beta vulgaris HOM05D009474 ORTHO05D006373 2.6e-07 60.8 164 25.6
EL10Ac5g12647 Beta vulgaris HOM05D009474 ORTHO05D006373 2.6e-07 60.8 181 24.3
EL10Ac9g22462 Beta vulgaris HOM05D008347 ORTHO05D006373 2.6e-07 60.8 177 25.4
EL10Ac3g07052 Beta vulgaris HOM05D008347 ORTHO05D006373 5.7e-07 59.7 134 26.9
SpUn0002_0360 Schrenkiella parvula HOM05D007883 ORTHO05D010332 9.7e-07 58.9 92 32.6
Sp7g06380 Schrenkiella parvula HOM05D006786 ORTHO05D011005 1.3e-06 58.5 96 36.5
Aa31sc420G30 Aethionema arabicum HOM05D003849 ORTHO05D002482 1.7e-06 58.2 184 29.3
EL10Ac1g01468 Beta vulgaris HOM05D008347 ORTHO05D006373 2.8e-06 57.4 134 27.6
EL10Ac8g20299 Beta vulgaris HOM05D008347 ORTHO05D006373 2.8e-06 57.4 114 31.6
EL10Ac4g09233 Beta vulgaris HOM05D012416 ORTHO05D006373 3.7e-06 57.0 176 23.3
AL7G49440 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 6.3e-06 56.2 179 21.2
SpUn0056_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 6.3e-06 56.2 158 29.1
SpUn0075_0010 Schrenkiella parvula HOM05D007883 ORTHO05D010332 6.3e-06 56.2 158 29.1
Aa31sc181G10 Aethionema arabicum HOM05D003849 ORTHO05D002482 8.2e-06 55.8 172 24.4


User provided reference genes

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