Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 2.9e-183 645.6 459 100.0
BcaB01g01860 Brassica carinata HOM05D008735 ORTHO05D095819 1.7e-69 267.7 242 73.6
BcaB05g22460 Brassica carinata HOM05D008735 ORTHO05D094962 2.7e-56 223.8 427 52.7
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 1.3e-53 214.9 178 64.6
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 3.1e-52 210.3 182 65.4
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 7.0e-52 209.1 183 64.5
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 1.6e-51 208.0 182 64.3
BcaB07g32265 Brassica carinata HOM05D004128 ORTHO05D095454 1.1e-49 201.8 255 74.1
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 1.1e-49 201.8 187 62.6
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-49 201.4 183 62.8
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 1.6e-48 198.0 187 61.5
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-48 198.0 187 61.5
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-48 197.6 181 61.9
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 2.7e-48 197.2 275 56.4
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-46 191.4 250 47.6
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 1.3e-45 188.3 146 67.1
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 3.7e-45 186.8 144 67.4
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 3.7e-45 186.8 179 60.3
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-44 184.9 474 37.1
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-44 184.5 468 34.6
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-43 181.8 167 62.3
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 3.5e-43 180.3 161 60.9
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 5.9e-43 179.5 169 58.6
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 5.9e-43 179.5 169 58.6
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.5e-41 174.9 169 58.6
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 1.9e-41 174.5 265 50.2
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 4.2e-41 173.3 178 56.2
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 4.2e-41 173.3 271 45.8
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 2.7e-40 170.6 264 50.0
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 8.0e-40 169.1 168 54.8
BcaC07g39620 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-39 168.7 146 58.9
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 4.0e-39 166.8 168 54.2
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 1.5e-38 164.9 168 54.2
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 2.0e-38 164.5 168 53.6
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 2.0e-38 164.5 168 53.6
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 2.8e-37 160.6 185 50.3
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 1.1e-36 158.7 139 61.9
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 3.1e-36 157.1 139 61.9
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-35 154.8 139 60.4
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 1.6e-35 154.8 139 61.2
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 2.0e-35 154.5 513 35.1
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-35 154.5 137 61.3
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 1.3e-34 151.8 155 52.9
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 2.3e-34 151.0 155 52.9
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 3.8e-34 150.2 187 51.9
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 3.3e-33 147.1 155 51.6
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 8.0e-32 142.5 153 54.9
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 1.0e-31 142.1 123 59.3
BraA07t30708Z Brassica rapa HOM05D004128 ORTHO05D008395 8.9e-31 139.0 179 49.7
BcaC06g31864 Brassica carinata HOM05D008735 ORTHO05D095380 1.5e-30 138.3 168 56.5
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 3.4e-30 137.1 152 52.6
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 3.4e-30 137.1 153 53.6
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 9.8e-30 135.6 99 69.7
C04p32440 Brassica napus HOM05D008735 ORTHO05D099532 2.2e-29 134.4 83 92.8
C06p53090 Brassica napus HOM05D008735 ORTHO05D097507 6.3e-29 132.9 74 91.9
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 5.4e-28 129.8 180 48.3
BcaB04g18992 Brassica carinata HOM05D004128 ORTHO05D095711 7.0e-28 129.4 183 49.2
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 1.7e-26 124.8 105 61.0
C02p46650 Brassica napus HOM05D008735 ORTHO05D098808 1.5e-25 121.7 401 43.1
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 5.6e-25 119.8 165 45.5
C03p80320 Brassica napus HOM05D008735 ORTHO05D097331 2.1e-24 117.9 405 44.2
BolC6t38817H Brassica oleracea HOM05D004128 ORTHO05D013239 2.1e-24 117.9 179 44.7
C03p79170 Brassica napus HOM05D008735 ORTHO05D098026 8.0e-24 115.9 71 94.4
C04p37860 Brassica napus HOM05D008735 ORTHO05D099266 8.0e-24 115.9 414 41.5
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 4.0e-23 113.6 125 53.6
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 4.0e-23 113.6 147 49.7
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 4.0e-23 113.6 147 49.7
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 4.0e-23 113.6 146 49.3
BcaC07g37416 Brassica carinata HOM05D004128 ORTHO05D008395 3.4e-22 110.5 173 41.0
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 4.4e-22 110.2 106 52.8
C03p46960 Brassica napus HOM05D008735 ORTHO05D099308 9.8e-22 109.0 434 37.3
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.1e-20 105.5 206 53.4
Sp6g09630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 2.4e-20 104.4 177 37.9
A07p17770 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-19 101.3 68 73.5
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 5.0e-18 96.7 60 76.7
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 2.5e-17 94.4 150 41.3
C09p44260 Brassica napus HOM05D008735 ORTHO05D016012 2.5e-17 94.4 376 42.8
BolC9t58724H Brassica oleracea HOM05D004128 ORTHO05D008395 2.5e-17 94.4 62 72.6
BcaC04g20235 Brassica carinata HOM05D004128 ORTHO05D018561 3.3e-17 94.0 79 65.8
BcaB07g32839 Brassica carinata HOM05D004128 ORTHO05D008395 5.6e-17 93.2 219 35.6
BolC2t10084H Brassica oleracea HOM05D004128 ORTHO05D008395 5.6e-17 93.2 134 45.5
BolC4t25488H Brassica oleracea HOM05D004128 ORTHO05D018561 9.5e-17 92.4 98 57.1
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 1.2e-16 92.0 119 44.5
BcaC01g00877 Brassica carinata HOM05D004128 ORTHO05D018561 1.6e-16 91.7 95 60.0
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 4.7e-16 90.1 123 43.9
BolC4t28166H Brassica oleracea HOM05D008062 ORTHO05D008395 6.2e-16 89.7 124 43.5
C09p32150 Brassica napus HOM05D008062 ORTHO05D008395 1.1e-15 89.0 121 43.8
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 1.1e-15 89.0 142 40.1
BcaC06g35461 Brassica carinata HOM05D004128 ORTHO05D018561 1.4e-15 88.6 195 41.0
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 1.4e-15 88.6 122 43.4
A06p00930 Brassica napus HOM05D008062 ORTHO05D008395 1.4e-15 88.6 122 43.4
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 4.0e-15 87.0 118 46.6
BolC2t07481H Brassica oleracea HOM05D008062 ORTHO05D008395 4.0e-15 87.0 122 41.8
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 5.2e-15 86.7 112 43.8
C05p06180 Brassica napus HOM05D008062 ORTHO05D008395 6.8e-15 86.3 118 44.1
BraA02t06439Z Brassica rapa HOM05D004128 ORTHO05D008395 1.5e-14 85.1 121 43.0
BcaC01g04075 Brassica carinata HOM05D004128 ORTHO05D018561 9.8e-14 82.4 96 53.1
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 4.9e-13 80.1 221 47.1
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 6.4e-13 79.7 472 41.1
BolC1t02375H Brassica oleracea HOM05D004128 ORTHO05D008395 1.1e-12 79.0 85 50.6
A09p64600 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-12 78.6 85 49.4
C02p45990 Brassica napus HOM05D004128 ORTHO05D008395 1.9e-12 78.2 85 49.4
C03p49840 Brassica napus HOM05D004128 ORTHO05D008395 3.2e-12 77.4 85 49.4
BolC3t18729H Brassica oleracea HOM05D004128 ORTHO05D008395 9.2e-12 75.9 74 52.7
C03p79100 Brassica napus HOM05D008735 ORTHO05D101655 4.6e-11 73.6 401 40.4
BolC4t27914H Brassica oleracea HOM05D008062 ORTHO05D008395 7.8e-11 72.8 119 40.3
BcaB01g01318 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-10 72.4 55 58.2
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.0e-10 72.4 102 43.1
BolC3t20838H Brassica oleracea HOM05D004128 ORTHO05D104579 1.0e-10 72.4 88 52.3
C02p36290 Brassica napus HOM05D004128 ORTHO05D097649 1.3e-10 72.0 86 53.5
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 1.7e-10 71.6 46 69.6
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-10 71.6 175 44.0
BcaC08g45091 Brassica carinata HOM05D004128 ORTHO05D008395 2.3e-10 71.2 78 55.1
BcaC03g14469 Brassica carinata HOM05D004128 ORTHO05D008395 5.0e-10 70.1 67 55.2
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 8.6e-10 69.3 135 36.3
BcaC01g01241 Brassica carinata HOM05D004128 ORTHO05D092402 1.1e-09 68.9 88 50.0
C06p23810 Brassica napus HOM05D004128 ORTHO05D013239 2.5e-09 67.8 83 51.8
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 3.3e-09 67.4 56 64.3
BcaC04g20967 Brassica carinata HOM05D004128 ORTHO05D008395 3.3e-09 67.4 169 43.8
A10p06920 Brassica napus HOM05D004128 ORTHO05D028143 3.3e-09 67.4 73 58.9
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 5.6e-09 66.6 450 36.7
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 7.3e-09 66.2 461 38.6
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 7.3e-09 66.2 127 37.8
Sp6g02630 Schrenkiella parvula HOM05D004128 ORTHO05D008395 1.2e-08 65.5 108 37.0
Sp7g07830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.6e-08 65.1 108 35.2
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 3.6e-08 63.9 77 48.1
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 6.2e-08 63.2 373 25.5
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 6.2e-08 63.2 430 34.7
BcaC06g33999 Brassica carinata HOM05D004128 ORTHO05D008395 8.1e-08 62.8 50 64.0
BcaB03g15896 Brassica carinata HOM05D008735 ORTHO05D092493 1.8e-07 61.6 83 49.4
BcaC05g28239 Brassica carinata HOM05D008735 ORTHO05D016012 1.8e-07 61.6 84 48.8
BcaC07g38508 Brassica carinata HOM05D008735 ORTHO05D090800 1.8e-07 61.6 84 48.8
C03p49780 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-07 61.6 34 76.5
C05p39020 Brassica napus HOM05D008735 ORTHO05D103688 1.8e-07 61.6 84 48.8
BolC1t03988H Brassica oleracea HOM05D008735 ORTHO05D105559 1.8e-07 61.6 84 48.8
BolC5t32640H Brassica oleracea HOM05D008735 ORTHO05D016012 1.8e-07 61.6 84 48.8
BolC5t33010H Brassica oleracea HOM05D008735 ORTHO05D016012 1.8e-07 61.6 84 48.8
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 2.3e-07 61.2 67 52.2
BolC5t30880H Brassica oleracea HOM05D004128 ORTHO05D013239 2.3e-07 61.2 34 76.5
BcaC07g37436 Brassica carinata HOM05D004128 ORTHO05D008395 3.1e-07 60.8 80 47.5
BolC4t25360H Brassica oleracea HOM05D008735 ORTHO05D016012 4.0e-07 60.5 94 44.7
BcaB07g32266 Brassica carinata HOM05D008735 ORTHO05D016012 5.2e-07 60.1 89 50.6
BcaC07g37515 Brassica carinata HOM05D004128 ORTHO05D008395 5.2e-07 60.1 363 31.7
BcaC07g40907 Brassica carinata HOM05D004128 ORTHO05D008395 5.2e-07 60.1 77 54.5
C04p32450 Brassica napus HOM05D008735 ORTHO05D016012 5.2e-07 60.1 84 47.6
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 6.8e-07 59.7 111 34.2
C09p52720 Brassica napus HOM05D004128 ORTHO05D008395 6.8e-07 59.7 34 73.5
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 6.8e-07 59.7 457 41.4
BolC6t38322H Brassica oleracea HOM05D004128 ORTHO05D008395 6.8e-07 59.7 56 46.4
C01p48550 Brassica napus HOM05D004128 ORTHO05D008395 8.9e-07 59.3 56 57.1
BolC5t32922H Brassica oleracea HOM05D004128 ORTHO05D033837 8.9e-07 59.3 61 57.4
BolC9t58725H Brassica oleracea HOM05D004128 ORTHO05D008395 8.9e-07 59.3 56 57.1
BcaC08g47485 Brassica carinata HOM05D008735 ORTHO05D016012 1.5e-06 58.5 84 47.6
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 1.5e-06 58.5 106 38.7
C06p31950 Brassica napus HOM05D004128 ORTHO05D008395 2.0e-06 58.2 55 45.5
C08p39080 Brassica napus HOM05D004128 ORTHO05D018561 2.6e-06 57.8 165 52.1
BcaNung01893 Brassica carinata HOM05D008735 ORTHO05D008395 3.4e-06 57.4 127 39.4
BolC6t40326H Brassica oleracea HOM05D008735 ORTHO05D016012 3.4e-06 57.4 94 43.6
SpUn0012_0140 Schrenkiella parvula HOM05D000286 ORTHO05D008395 7.5e-06 56.2 96 35.4


User provided reference genes

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