Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17595 Brassica carinata HOM05D001498 ORTHO05D008559 7.6e-48 193.4 88 100.0
BcaB07g33212 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-45 184.9 86 96.5
BcaB05g22949 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-44 182.6 86 95.3
BcaB05g22881 Brassica carinata HOM05D001498 ORTHO05D008559 5.6e-43 177.2 86 93.0
BcaB01g01370 Brassica carinata HOM05D001498 ORTHO05D008559 8.1e-42 173.3 86 91.9
BcaB05g23794 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-36 154.8 85 80.0
BcaB05g24510 Brassica carinata HOM05D001498 ORTHO05D008559 6.7e-36 153.7 85 81.2
BraA03t15279Z Brassica rapa HOM05D001498 ORTHO05D008559 1.9e-35 152.1 85 78.8
BcaB06g26316 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-35 151.4 85 77.6
BraA01t01574Z Brassica rapa HOM05D001498 ORTHO05D008559 7.4e-35 150.2 85 76.5
BraSC37t46120Z Brassica rapa HOM05D001498 ORTHO05D008559 7.4e-35 150.2 82 79.3
BcaB06g26679 Brassica carinata HOM05D001498 ORTHO05D008559 9.6e-35 149.8 85 76.5
BolC5t33265H Brassica oleracea HOM05D001498 ORTHO05D008559 9.6e-35 149.8 85 77.6
BraA01t02472Z Brassica rapa HOM05D001498 ORTHO05D008559 9.6e-35 149.8 85 77.6
BcaC05g28455 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-34 149.4 85 76.5
BcaB06g27204 Brassica carinata HOM05D001498 ORTHO05D008559 2.1e-34 148.7 85 75.3
BolC5t32332H Brassica oleracea HOM05D001498 ORTHO05D008559 3.7e-34 147.9 85 75.3
BcaC02g12296 Brassica carinata HOM05D001498 ORTHO05D008559 6.2e-34 147.1 85 76.5
BcaC06g35693 Brassica carinata HOM05D001498 ORTHO05D008559 8.1e-34 146.7 85 76.5
BolC4t26384H Brassica oleracea HOM05D001498 ORTHO05D008559 1.4e-33 146.0 85 75.3
BcaC09g48601 Brassica carinata HOM05D001498 ORTHO05D008559 1.8e-33 145.6 85 75.3
BolC3t20363H Brassica oleracea HOM05D001498 ORTHO05D008559 4.0e-33 144.4 85 74.1
BcaB07g33942 Brassica carinata HOM05D001498 ORTHO05D008559 9.0e-33 143.3 85 75.3
BcaC06g35772 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-32 142.5 85 74.1
BolC6t36794H Brassica oleracea HOM05D001498 ORTHO05D008559 1.5e-32 142.5 85 74.1
BolC7t41574H Brassica oleracea HOM05D001498 ORTHO05D008559 1.5e-32 142.5 85 74.1
BcaB01g01186 Brassica carinata HOM05D001498 ORTHO05D008559 9.9e-32 139.8 82 75.6
BcaB04g17610 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-31 139.0 82 75.6
BcaC06g36175 Brassica carinata HOM05D001498 ORTHO05D008559 3.8e-31 137.9 85 71.8
BcaC05g26788 Brassica carinata HOM05D001498 ORTHO05D008559 8.4e-31 136.7 82 70.7
BcaB06g26482 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-30 136.3 82 70.7
BolC8t49594H Brassica oleracea HOM05D001498 ORTHO05D008559 1.1e-30 136.3 85 71.8
BcaB01g01483 Brassica carinata HOM05D001498 ORTHO05D008559 3.2e-30 134.8 82 72.0
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 3.2e-30 134.8 83 72.3
BcaB03g16805 Brassica carinata HOM05D001498 ORTHO05D008559 3.2e-30 134.8 82 69.5
BcaB06g26728 Brassica carinata HOM05D001498 ORTHO05D008559 3.2e-30 134.8 82 69.5
BcaB03g16073 Brassica carinata HOM05D001498 ORTHO05D008559 4.2e-30 134.4 82 69.5
BcaB07g33755 Brassica carinata HOM05D001498 ORTHO05D008559 4.2e-30 134.4 82 69.5
BcaC09g48840 Brassica carinata HOM05D001498 ORTHO05D008559 4.2e-30 134.4 94 64.9
BcaB04g17975 Brassica carinata HOM05D001498 ORTHO05D008559 5.5e-30 134.0 82 69.5
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 5.5e-30 134.0 82 70.7
BcaB05g23075 Brassica carinata HOM05D001498 ORTHO05D008559 7.1e-30 133.7 82 72.0
BcaB07g33318 Brassica carinata HOM05D001498 ORTHO05D008559 7.1e-30 133.7 82 72.0
BcaB02g11315 Brassica carinata HOM05D001498 ORTHO05D008559 9.3e-30 133.3 82 70.7
BcaB05g23076 Brassica carinata HOM05D001498 ORTHO05D008559 9.3e-30 133.3 82 68.3
BcaB05g23540 Brassica carinata HOM05D001498 ORTHO05D008559 9.3e-30 133.3 82 72.0
BcaC05g27520 Brassica carinata HOM05D001498 ORTHO05D008559 9.3e-30 133.3 82 70.7
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 9.3e-30 133.3 82 70.7
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 9.3e-30 133.3 82 70.7
BolC6t36733H Brassica oleracea HOM05D001498 ORTHO05D011506 9.3e-30 133.3 83 69.9
BraA03t14503Z Brassica rapa HOM05D001498 ORTHO05D008559 9.3e-30 133.3 82 70.7
BraA09t40147Z Brassica rapa HOM05D001498 ORTHO05D008559 9.3e-30 133.3 82 70.7
BolC3t16975H Brassica oleracea HOM05D001498 ORTHO05D008559 1.2e-29 132.9 82 69.5
BcaB06g27025 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-29 132.5 82 70.7
BcaB06g26760 Brassica carinata HOM05D002776 ORTHO05D008559 2.1e-29 132.1 80 71.2
BcaB07g32914 Brassica carinata HOM05D001498 ORTHO05D008559 2.1e-29 132.1 82 69.5
BcaB02g11278 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-29 131.7 82 69.5
BcaB05g23121 Brassica carinata HOM05D001498 ORTHO05D008559 2.7e-29 131.7 82 68.3
BcaC08g44055 Brassica carinata HOM05D001498 ORTHO05D008559 3.5e-29 131.3 82 69.5
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 3.5e-29 131.3 83 68.7
BolC2t11287H Brassica oleracea HOM05D001498 ORTHO05D008559 4.6e-29 131.0 82 69.5
BcaC04g22430 Brassica carinata HOM05D001498 ORTHO05D008559 6.0e-29 130.6 82 68.3
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 6.0e-29 130.6 83 68.7
BcaB06g26762 Brassica carinata HOM05D001498 ORTHO05D008559 7.9e-29 130.2 82 70.7
BcaC07g39106 Brassica carinata HOM05D001498 ORTHO05D008559 7.9e-29 130.2 82 69.5
BcaNung05286 Brassica carinata HOM05D001498 ORTHO05D008559 7.9e-29 130.2 83 66.3
BcaC05g26790 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-28 129.8 82 70.7
BcaB01g01310 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-28 129.4 82 69.5
BcaB05g23432 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-28 129.4 82 68.3
BcaB06g27857 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-28 129.4 82 67.1
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 1.3e-28 129.4 82 68.3
BcaC01g02506 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-28 128.6 82 68.3
BcaC06g36449 Brassica carinata HOM05D001498 ORTHO05D008559 2.3e-28 128.6 83 67.5
BcaB01g03186 Brassica carinata HOM05D001498 ORTHO05D008559 3.9e-28 127.9 82 67.1
BcaB07g32209 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-28 127.5 81 67.9
BcaC08g43732 Brassica carinata HOM05D001498 ORTHO05D008559 5.1e-28 127.5 82 68.3
BcaB04g17679 Brassica carinata HOM05D001498 ORTHO05D008559 6.7e-28 127.1 82 65.9
BcaB07g33219 Brassica carinata HOM05D001498 ORTHO05D008559 6.7e-28 127.1 82 68.3
BcaC04g19550 Brassica carinata HOM05D001498 ORTHO05D008559 1.5e-27 125.9 82 67.1
BcaC01g03922 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-25 119.4 75 68.0
BcaB01g02582 Brassica carinata HOM05D001498 ORTHO05D008559 2.4e-25 118.6 60 81.7
BolC1t04765H Brassica oleracea HOM05D001498 ORTHO05D008559 5.3e-25 117.5 60 83.3
BcaB04g17364 Brassica carinata HOM05D001498 ORTHO05D008559 2.6e-24 115.2 58 82.8
BcaC01g02040 Brassica carinata HOM05D001498 ORTHO05D008559 2.6e-24 115.2 81 60.5
C03p69240 Brassica napus HOM05D008414 ORTHO05D008559 2.6e-24 115.2 81 60.5
BcaB04g18490 Brassica carinata HOM05D001498 ORTHO05D008559 4.5e-24 114.4 85 62.4
BcaB07g33083 Brassica carinata HOM05D001498 ORTHO05D008559 1.7e-23 112.5 74 70.3
BcaC05g25871 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-22 109.8 67 70.1
BcaC07g38656 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-22 109.8 85 57.6
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 1.9e-22 109.0 82 61.0
BcaC07g37924 Brassica carinata HOM05D001498 ORTHO05D008559 4.6e-21 104.4 81 56.8
BcaB04g18117 Brassica carinata HOM05D001498 ORTHO05D008559 1.0e-20 103.2 61 73.8
BolC9t57419H Brassica oleracea HOM05D001498 ORTHO05D008559 2.3e-20 102.1 81 55.6
BcaC06g36228 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-20 101.7 81 54.3
BcaB05g24681 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-19 98.2 57 71.9
BcaC01g01872 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-19 98.2 81 53.1
BcaC04g20283 Brassica carinata HOM05D001498 ORTHO05D008559 3.3e-19 98.2 81 54.3
BcaC05g27621 Brassica carinata HOM05D001498 ORTHO05D008559 7.4e-19 97.1 82 58.5
BolC3t13891H Brassica oleracea HOM05D001498 ORTHO05D008559 3.7e-18 94.7 57 70.2
BolC1t03832H Brassica oleracea HOM05D001498 ORTHO05D008559 4.8e-18 94.4 81 48.1
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 6.3e-18 94.0 58 67.2
BolC1t01630H Brassica oleracea HOM05D001498 ORTHO05D008559 1.4e-17 92.8 57 68.4
BcaC05g27664 Brassica carinata HOM05D001498 ORTHO05D008559 2.4e-17 92.0 81 48.1
C07p06240 Brassica napus HOM05D001498 ORTHO05D016111 6.9e-17 90.5 75 52.0
BcaB02g11055 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-16 89.7 57 66.7
BolC9t57109H Brassica oleracea HOM05D001498 ORTHO05D008559 2.0e-16 89.0 81 44.4
BolC7t40933H Brassica oleracea HOM05D001498 ORTHO05D008559 3.4e-16 88.2 81 45.7
C09p45500 Brassica napus HOM05D001498 ORTHO05D016111 1.3e-15 86.3 75 50.7
BcaC04g19842 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-14 83.2 81 44.4
BcaB01g01571 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-14 82.8 57 59.6
BcaB07g33756 Brassica carinata HOM05D001498 ORTHO05D003542 1.9e-14 82.4 51 68.6
A05p20230 Brassica napus HOM05D001498 ORTHO05D042518 4.2e-14 81.3 80 55.0
BraA05t20933Z Brassica rapa HOM05D001498 ORTHO05D042518 4.2e-14 81.3 80 55.0
BcaB05g22440 Brassica carinata HOM05D001498 ORTHO05D008559 1.6e-13 79.3 51 64.7
BcaC06g36327 Brassica carinata HOM05D001498 ORTHO05D008559 2.0e-11 72.4 64 46.9
BcaC04g21442 Brassica carinata HOM05D001498 ORTHO05D008559 5.7e-11 70.9 57 57.9
BcaC04g20542 Brassica carinata HOM05D002776 ORTHO05D012331 7.4e-11 70.5 59 45.8
BcaB02g10767 Brassica carinata HOM05D001498 ORTHO05D008559 6.3e-10 67.4 59 45.8
BcaB02g10768 Brassica carinata HOM05D013880 ORTHO05D001170 1.4e-09 66.2 87 40.2
BcaNung05283 Brassica carinata HOM05D001498 ORTHO05D008559 2.4e-09 65.5 41 70.7
BcaB05g22954 Brassica carinata HOM05D001498 ORTHO05D008559 4.1e-09 64.7 41 61.0
Carub.0006s2608 Capsella rubella HOM05D001308 ORTHO05D001170 9.1e-09 63.5 84 38.1
Sp7g11420 Schrenkiella parvula HOM05D001308 ORTHO05D001170 1.2e-08 63.2 88 36.4
BcaB05g22111 Brassica carinata HOM05D001308 ORTHO05D001170 1.5e-08 62.8 86 34.9
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 2.0e-08 62.4 39 66.7
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 2.0e-08 62.4 39 66.7
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 2.0e-08 62.4 39 66.7
Carub.0001s3567 Capsella rubella HOM05D001308 ORTHO05D001170 2.0e-08 62.4 84 38.1
Carub.0002s0986 Capsella rubella HOM05D001308 ORTHO05D001170 2.0e-08 62.4 84 38.1
Carub.0003s3368 Capsella rubella HOM05D001308 ORTHO05D001170 2.0e-08 62.4 84 38.1
BcaB02g11451 Brassica carinata HOM05D001308 ORTHO05D001170 2.6e-08 62.0 94 35.1
BcaB06g26192 Brassica carinata HOM05D001308 ORTHO05D001170 2.6e-08 62.0 94 35.1
BcaC05g27665 Brassica carinata HOM05D001308 ORTHO05D001170 2.6e-08 62.0 94 34.0
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 2.6e-08 62.0 39 66.7
BcaC02g10530 Brassica carinata HOM05D001308 ORTHO05D001170 3.4e-08 61.6 94 34.0
BcaC08g45194 Brassica carinata HOM05D001308 ORTHO05D001170 3.4e-08 61.6 94 34.0
Sp4g09440 Schrenkiella parvula HOM05D001308 ORTHO05D001170 3.4e-08 61.6 88 35.2
BolC3t19181H Brassica oleracea HOM05D008414 ORTHO05D008559 4.5e-08 61.2 45 57.8
BolC5t32218H Brassica oleracea HOM05D001498 ORTHO05D008559 5.9e-08 60.8 33 75.8
BolC7t44374H Brassica oleracea HOM05D001498 ORTHO05D106148 5.9e-08 60.8 33 75.8
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 5.9e-08 60.8 39 64.1
BcaB02g10636 Brassica carinata HOM05D001308 ORTHO05D001170 7.7e-08 60.5 94 36.2
C03p71040 Brassica napus HOM05D001308 ORTHO05D001170 7.7e-08 60.5 87 34.5
BolC7t41041H Brassica oleracea HOM05D001498 ORTHO05D008559 1.0e-07 60.1 51 47.1
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 1.3e-07 59.7 35 71.4
BcaB05g21921 Brassica carinata HOM05D001308 ORTHO05D001170 1.7e-07 59.3 94 36.2
BcaC06g35066 Brassica carinata HOM05D001498 ORTHO05D008559 2.9e-07 58.5 49 46.9
Sp5g20000 Schrenkiella parvula HOM05D001308 ORTHO05D001170 2.9e-07 58.5 86 31.4
BcaB01g01439 Brassica carinata HOM05D001308 ORTHO05D001170 5.0e-07 57.8 92 34.8
BcaB01g03044 Brassica carinata HOM05D001308 ORTHO05D001170 5.0e-07 57.8 78 35.9
BcaB06g27009 Brassica carinata HOM05D001308 ORTHO05D001170 5.0e-07 57.8 78 35.9
BcaB07g33101 Brassica carinata HOM05D001308 ORTHO05D001170 5.0e-07 57.8 92 34.8
BcaB05g23870 Brassica carinata HOM05D001308 ORTHO05D001170 6.5e-07 57.4 92 34.8
BcaB02g11429 Brassica carinata HOM05D001308 ORTHO05D001170 1.1e-06 56.6 78 34.6
BcaB06g26919 Brassica carinata HOM05D001308 ORTHO05D001170 1.1e-06 56.6 96 32.3
BcaB06g27859 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-06 56.2 37 64.9
BcaC05g27678 Brassica carinata HOM05D001308 ORTHO05D001170 1.9e-06 55.8 78 35.9
A01p26900 Brassica napus HOM05D001308 ORTHO05D001170 2.5e-06 55.5 92 31.5
BcaC04g22673 Brassica carinata HOM05D001224 ORTHO05D001170 3.2e-06 55.1 71 36.6
BcaC09g48602 Brassica carinata HOM05D001224 ORTHO05D001170 3.2e-06 55.1 71 36.6
C03p58280 Brassica napus HOM05D001224 ORTHO05D001170 3.2e-06 55.1 71 36.6
C04p47850 Brassica napus HOM05D001224 ORTHO05D010571 3.2e-06 55.1 71 36.6
C05p18360 Brassica napus HOM05D001224 ORTHO05D003542 3.2e-06 55.1 71 36.6
C05p45400 Brassica napus HOM05D001224 ORTHO05D003542 3.2e-06 55.1 71 36.6
BolC4t26386H Brassica oleracea HOM05D001224 ORTHO05D003542 3.2e-06 55.1 71 36.6
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 3.2e-06 55.1 71 36.6
BcaC01g01744 Brassica carinata HOM05D001308 ORTHO05D001170 4.2e-06 54.7 94 31.9
C02p49630 Brassica napus HOM05D001308 ORTHO05D001170 4.2e-06 54.7 89 32.6
C05p27340 Brassica napus HOM05D001224 ORTHO05D001170 4.2e-06 54.7 71 36.6
C05p36110 Brassica napus HOM05D001224 ORTHO05D003542 5.5e-06 54.3 71 35.2
C06p04840 Brassica napus HOM05D001224 ORTHO05D003542 5.5e-06 54.3 71 36.6
BolC8t48056H Brassica oleracea HOM05D001308 ORTHO05D001170 5.5e-06 54.3 86 32.6
BraA08t32906Z Brassica rapa HOM05D001308 ORTHO05D001170 5.5e-06 54.3 92 31.5
BcaB04g18925 Brassica carinata HOM05D001308 ORTHO05D001170 7.2e-06 53.9 83 33.7
BcaB08g36308 Brassica carinata HOM05D001308 ORTHO05D001170 7.2e-06 53.9 79 34.2
BcaC01g03562 Brassica carinata HOM05D001308 ORTHO05D001170 7.2e-06 53.9 83 32.5
BcaC03g15535 Brassica carinata HOM05D001308 ORTHO05D001170 7.2e-06 53.9 94 31.9
BcaC03g17140 Brassica carinata HOM05D001308 ORTHO05D001170 7.2e-06 53.9 84 32.1
BcaC06g33714 Brassica carinata HOM05D001308 ORTHO05D001170 7.2e-06 53.9 77 35.1
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 7.2e-06 53.9 71 36.6
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 7.2e-06 53.9 71 36.6
BolC3t17398H Brassica oleracea HOM05D001308 ORTHO05D001170 7.2e-06 53.9 83 32.5
BcaC08g43836 Brassica carinata HOM05D001224 ORTHO05D001170 9.4e-06 53.5 71 35.2


User provided reference genes

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