Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17425 Brassica carinata HOM05D003579 ORTHO05D004266 8.8e-154 547.0 286 100.0
A08p04710 Brassica napus HOM05D003579 ORTHO05D004266 1.8e-130 469.5 281 89.3
BraA08t32501Z Brassica rapa HOM05D003579 ORTHO05D004266 1.5e-129 466.5 281 88.6
BcaC07g37135 Brassica carinata HOM05D003579 ORTHO05D004266 3.7e-128 461.8 281 87.5
BolC8t47313H Brassica oleracea HOM05D003579 ORTHO05D004266 1.6e-126 456.4 286 85.3
Thhalv10011337m.g Eutrema salsugineum HOM05D003579 ORTHO05D004266 4.4e-121 438.3 280 83.2
Sp3g15890 Schrenkiella parvula HOM05D003579 ORTHO05D004266 1.6e-118 429.9 280 80.4
Carub.0001s3756 Capsella rubella HOM05D003579 ORTHO05D004266 3.5e-118 428.7 281 81.9
AL3G30930 Arabidopsis lyrata HOM05D003579 ORTHO05D004266 5.9e-118 427.9 280 80.7
AL1G55060 Arabidopsis lyrata HOM05D003579 ORTHO05D004266 2.3e-117 426.0 281 81.9
CARHR038050 Cardamine hirsuta HOM05D003579 ORTHO05D004266 8.6e-117 424.1 280 82.1
AT3G17770 Arabidopsis thaliana HOM05D003579 ORTHO05D004266 1.1e-116 423.7 280 79.6
Thhalv10020350m.g Eutrema salsugineum HOM05D003579 ORTHO05D004266 1.6e-115 419.9 277 79.8
BolC5t33593H Brassica oleracea HOM05D003579 ORTHO05D004266 3.6e-115 418.7 280 79.3
Aa31LG8G4650 Aethionema arabicum HOM05D003579 ORTHO05D004266 8.0e-115 417.5 279 79.6
A05p32070 Brassica napus HOM05D003579 ORTHO05D004266 1.0e-114 417.2 280 78.9
CARHR093110 Cardamine hirsuta HOM05D003579 ORTHO05D004266 4.0e-114 415.2 276 79.7
Carub.0003s1749 Capsella rubella HOM05D003579 ORTHO05D004266 1.7e-112 409.8 279 78.5
C05p48570 Brassica napus HOM05D003579 ORTHO05D004266 6.4e-112 407.9 280 77.5
BcaNung05880 Brassica carinata HOM05D003579 ORTHO05D004266 2.0e-110 402.9 279 77.4
BraA05t22036Z Brassica rapa HOM05D003579 ORTHO05D004266 1.0e-109 400.6 307 72.3
C08p05080 Brassica napus HOM05D003579 ORTHO05D004266 1.5e-108 396.7 280 78.6
Sp1g35380 Schrenkiella parvula HOM05D003579 ORTHO05D004266 1.9e-100 369.8 281 75.4
AT1G48430 Arabidopsis thaliana HOM05D003579 ORTHO05D004266 7.3e-100 367.9 246 80.1
Cc04_g09210 Coffea canephora HOM05D003579 ORTHO05D004266 1.6e-99 366.7 279 69.5
Gohir.D02G120000 Gossypium hirsutum HOM05D003579 ORTHO05D004266 2.1e-99 366.3 275 69.8
Dinv07799 Davidia involucrata HOM05D003579 ORTHO05D004266 4.7e-99 365.2 277 69.7
FvH4_5g17820 Fragaria vesca HOM05D003579 ORTHO05D004266 4.7e-99 365.2 277 70.0
FAN04G1919 Fragaria x ananassa HOM05D003579 ORTHO05D004266 6.2e-99 364.8 277 69.7
Gohir.A03G091600 Gossypium hirsutum HOM05D003579 ORTHO05D004266 6.2e-99 364.8 275 69.1
Gorai.005G134000 Gossypium raimondii HOM05D003579 ORTHO05D004266 6.2e-99 364.8 275 69.5
Ciclev10019405m.g Citrus clementina HOM05D003579 ORTHO05D004266 1.1e-98 364.0 279 68.8
Manes.06G001700 Manihot esculenta HOM05D003579 ORTHO05D004266 1.1e-98 364.0 277 68.6
FAN08G1300 Fragaria x ananassa HOM05D003579 ORTHO05D004266 1.8e-98 363.2 277 70.4
MD14G1240900 Malus domestica HOM05D003579 ORTHO05D004266 1.8e-98 363.2 279 68.8
Rhsim08G0128400 Rhododendron simsii HOM05D003579 ORTHO05D004266 1.8e-98 363.2 276 69.6
Nn4g24545 Nelumbo nucifera HOM05D003579 ORTHO05D004266 4.0e-98 362.1 279 68.5
Atru.chr9.1578_Atru.chr9.1579 Acer truncatum HOM05D003579 ORTHO05D004266 1.5e-97 360.1 281 68.3
vmacro17766 Vaccinium macrocarpon HOM05D003579 ORTHO05D004266 1.5e-97 360.1 275 68.7
Actinidia34663 Actinidia chinensis HOM05D003579 ORTHO05D004266 2.0e-97 359.8 279 67.7
Thecc.03G066100 Theobroma cacao HOM05D003579 ORTHO05D004266 2.0e-97 359.8 277 67.9
RcHm_v2.0_Chr7g0177761 Rosa chinensis HOM05D003579 ORTHO05D004266 2.6e-97 359.4 279 68.1
MD06G1234200 Malus domestica HOM05D003579 ORTHO05D004266 3.4e-97 359.0 279 67.7
CANSAT56G2203 Cannabis sativa HOM05D003579 ORTHO05D004266 1.3e-96 357.1 279 67.4
PGSC0003DMG400026957 Solanum tuberosum HOM05D003579 ORTHO05D004266 1.3e-96 357.1 277 67.1
PSO017G1464 Papaver somniferum HOM05D003579 ORTHO05D004266 1.7e-96 356.7 279 67.7
PSO478G0806 Papaver somniferum HOM05D003579 ORTHO05D004266 1.7e-96 356.7 279 68.1
TWI60G0145 Tripterygium wilfordii HOM05D003579 ORTHO05D004266 1.7e-96 356.7 281 68.3
Duzib205G0446 Durio zibethinus HOM05D003579 ORTHO05D004266 2.2e-96 356.3 279 67.7
Sabra12G0028200 Salix brachista HOM05D003579 ORTHO05D004266 2.2e-96 356.3 279 67.4
DCAR_011388 Daucus carota HOM05D003579 ORTHO05D004266 2.9e-96 355.9 278 65.5
Oeu023525.2 Olea europaea HOM05D003579 ORTHO05D004266 2.9e-96 355.9 277 66.4
Solyc06g072380.3 Solanum lycopersicum HOM05D003579 ORTHO05D004266 2.9e-96 355.9 277 67.5
Sopen06g028750 Solanum pennellii HOM05D003579 ORTHO05D004266 2.9e-96 355.9 277 67.5
Duzib084G0133 Durio zibethinus HOM05D003579 ORTHO05D004266 6.4e-96 354.8 279 67.0
GSVIVG01012941001 Vitis vinifera HOM05D003579 ORTHO05D004266 6.4e-96 354.8 277 68.6
CAN.G65.87 Capsicum annuum HOM05D003579 ORTHO05D004266 8.4e-96 354.4 277 66.4
COL.COLO4_24456 Corchorus olitorius HOM05D003579 ORTHO05D004266 8.4e-96 354.4 279 65.9
Lj5A164G66 Lonicera japonica HOM05D003579 ORTHO05D004266 1.1e-95 354.0 279 66.3
Potri.015G032500 Populus trichocarpa HOM05D003579 ORTHO05D004266 2.4e-95 352.8 279 66.7
Potri.012G041100 Populus trichocarpa HOM05D003579 ORTHO05D004266 3.2e-95 352.4 279 66.7
Prupe.5G238700 Prunus persica HOM05D003579 ORTHO05D004266 3.2e-95 352.4 279 67.4
CiPaw.16G098300 Carya illinoinensis HOM05D003579 ORTHO05D004266 7.1e-95 351.3 277 67.1
MSTRG.9359 Avicennia marina HOM05D003579 ORTHO05D004266 9.2e-95 350.9 277 66.8
CANSAT56G3429 Cannabis sativa HOM05D003579 ORTHO05D004266 9.2e-95 350.9 278 66.5
FAN13G2047 Fragaria x ananassa HOM05D003579 ORTHO05D004266 3.5e-94 349.0 298 64.8
Nitab4.5_0003127g0010 Nicotiana tabacum HOM05D003579 ORTHO05D004266 4.6e-94 348.6 284 64.8
TWI15G0294 Tripterygium wilfordii HOM05D003579 ORTHO05D004266 4.6e-94 348.6 279 67.7
CiPaw.15G149000 Carya illinoinensis HOM05D003579 ORTHO05D004266 7.8e-94 347.8 277 66.8
Nitab4.5_0000033g0340 Nicotiana tabacum HOM05D003579 ORTHO05D004266 3.9e-93 345.5 284 65.5
SalBow1G2020 Salvia bowleyana HOM05D003579 ORTHO05D004266 8.6e-93 344.4 280 65.0
ECA233G2231 Erigeron canadensis HOM05D003579 ORTHO05D004266 1.1e-92 344.0 279 63.4
HanXRQChr03g0087091 Helianthus annuus HOM05D003579 ORTHO05D004266 1.1e-92 344.0 280 64.6
Eucgr.H00571 Eucalyptus grandis HOM05D003579 ORTHO05D004266 4.3e-92 342.0 276 63.8
Aqoxy3G00001 Aquilegia oxysepala HOM05D003579 ORTHO05D004266 5.6e-92 341.7 279 63.4
Hma1.2p1_0471F.1_g159320 Hydrangea macrophylla HOM05D003579 ORTHO05D004266 5.6e-92 341.7 275 67.6
Peaxi162Scf00643g00664 Petunia axillaris HOM05D003579 ORTHO05D004266 1.2e-91 340.5 293 63.1
Gohir.A07G060800 Gossypium hirsutum HOM05D003579 ORTHO05D004266 1.6e-91 340.1 285 62.8
Nn3g19567 Nelumbo nucifera HOM05D003579 ORTHO05D004266 1.6e-91 340.1 265 69.1
Lalb_Chr24g0398301 Lupinus albus HOM05D003579 ORTHO05D004266 2.1e-91 339.7 277 66.1
MBI13_g21695_MAGBIO Magnolia biondii HOM05D003579 ORTHO05D004266 2.1e-91 339.7 308 59.7
Sabra15G0026700 Salix brachista HOM05D003579 ORTHO05D004266 2.8e-91 339.3 302 61.6
SabraUnG0005900 Salix brachista HOM05D003579 ORTHO05D004266 2.8e-91 339.3 302 61.6
PGR083G0897 Punica granatum HOM05D003579 ORTHO05D004266 4.7e-91 338.6 279 64.2
Migut.D01207 Erythranthe guttata HOM05D003579 ORTHO05D004266 3.1e-90 335.9 272 66.2
Glyma.09G170600 Glycine max HOM05D003579 ORTHO05D004266 4.0e-90 335.5 279 65.2
ATR0598G272 Amborella trichopoda HOM05D003579 ORTHO05D004266 6.8e-90 334.7 275 64.0
Lsat_1_v5_gn_8_1741 Lactuca sativa HOM05D003579 ORTHO05D004266 6.8e-90 334.7 276 65.2
Os03g0719300 Oryza sativa ssp. japonica HOM05D003579 ORTHO05D004266 6.8e-90 334.7 277 61.7
VMungo0464G0093 Vigna mungo HOM05D003579 ORTHO05D004266 1.5e-89 333.6 279 63.8
Glyma.07G107100 Glycine max HOM05D003579 ORTHO05D004266 2.0e-89 333.2 279 65.6
AUR62038599 Chenopodium quinoa HOM05D003579 ORTHO05D004266 2.6e-89 332.8 279 63.4
Sed0003427 Sechium edule HOM05D003579 ORTHO05D004266 4.4e-89 332.0 280 63.9
Sc10g0008960 Simmondsia chinensis HOM05D003579 ORTHO05D004266 4.4e-89 332.0 276 63.8
CsaV3_1G004890 Cucumis sativus L. HOM05D003579 ORTHO05D004266 4.9e-88 328.6 278 63.3
PGR044G2375 Punica granatum HOM05D003579 ORTHO05D004266 4.9e-88 328.6 277 63.5
EL10Ac8g19495 Beta vulgaris HOM05D003579 ORTHO05D004266 8.4e-88 327.8 279 62.4
Phvul.004G146300 Phaseolus vulgaris HOM05D003579 ORTHO05D004266 1.1e-87 327.4 279 62.7
HPP92_013127 Vanilla planifolia HOM05D003579 ORTHO05D004266 9.3e-87 324.3 277 63.5
HPP92_013151 Vanilla planifolia HOM05D003579 ORTHO05D004266 9.3e-87 324.3 277 63.5
arahy.Tifrunner.gnm1.ann1.N38075 Arachis hypogaea HOM05D003579 ORTHO05D004266 2.7e-86 322.8 269 64.7
SMO230G0064 Selaginella moellendorffii HOM05D003579 ORTHO05D004266 1.5e-84 317.0 274 60.6
arahy.Tifrunner.gnm1.ann1.7TIF1A Arachis hypogaea HOM05D003579 ORTHO05D004266 3.3e-84 315.8 276 63.0
FAN18G3127 Fragaria x ananassa HOM05D003579 ORTHO05D004266 1.3e-83 313.9 277 62.5
arahy.Tifrunner.gnm1.ann1.SGC6ES Arachis hypogaea HOM05D003579 ORTHO05D004266 8.1e-83 311.2 262 63.7
MELO3C001926.2 Cucumis melo HOM05D003579 ORTHO05D004266 6.9e-82 308.1 283 59.4
unitig_736.g22827 Utricularia gibba HOM05D003579 ORTHO05D004266 6.9e-82 308.1 280 60.7
SGA_v2.0_scaffold74G24677 Striga asiatica HOM05D003579 ORTHO05D004266 1.3e-80 303.9 275 58.9
Eucgr.K02291 Eucalyptus grandis HOM05D003579 ORTHO05D004266 2.2e-80 303.1 308 55.8
AUR62034013 Chenopodium quinoa HOM05D003579 ORTHO05D004266 1.4e-79 300.4 286 57.7
TPR.G31707 Trifolium pratense HOM05D003579 ORTHO05D004266 1.2e-78 297.4 277 58.1
Lj2g0001753 Lotus japonicus HOM05D003579 ORTHO05D004266 1.1e-76 290.8 275 57.5
Psat1g124800 Pisum sativum HOM05D003579 ORTHO05D004266 2.5e-76 289.7 277 57.8
TAR028G0001 Trochodendron aralioides HOM05D003579 ORTHO05D004266 2.8e-75 286.2 211 70.1
Medtr6g073003 Medicago truncatula HOM05D003579 ORTHO05D004266 1.4e-74 283.9 277 56.0
Haze_18948 Corylus avellana HOM05D003579 ORTHO05D004266 2.0e-73 280.0 266 60.5
Pp3c10_19150 Physcomitrium patens HOM05D003579 ORTHO05D004266 2.0e-73 280.0 274 54.7
Ca_20292_v3 Cicer arietinum L. HOM05D003579 ORTHO05D004266 2.6e-73 279.6 281 54.8
AagrBONN_evm.TU.Sc2ySwM_228.5556 Anthoceros agrestis HOM05D003579 ORTHO05D004266 3.8e-72 275.8 274 56.6
Hund22317 Selenicereus undatus HOM05D003579 ORTHO05D004266 6.4e-72 275.0 246 60.2
Gohir.D07G065501 Gossypium hirsutum HOM05D003579 ORTHO05D004266 5.5e-71 271.9 234 61.5
CSS0000253 Camellia sinensis var. sinensis HOM05D003579 ORTHO05D004266 7.1e-71 271.6 203 69.0
Pp3c4_4070 Physcomitrium patens HOM05D003579 ORTHO05D004266 1.6e-70 270.4 274 54.4
Cpa.g.sc3.337 Carica papaya HOM05D003579 ORTHO05D004266 1.3e-69 267.3 279 54.8
CDE06G0014 Ceratophyllum demersum HOM05D003579 ORTHO05D004266 7.4e-68 261.5 231 60.6
SGA_v2.0_scaffold40G15653 Striga asiatica HOM05D003579 ORTHO05D004266 2.8e-67 259.6 233 59.7
Mapoly0125s0006 Marchantia polymorpha HOM05D003579 ORTHO05D004266 6.2e-67 258.5 281 50.5
Gorai.001G069000 Gossypium raimondii HOM05D003579 ORTHO05D004266 9.0e-66 254.6 208 60.1
Lj2g0026679 Lotus japonicus HOM05D003579 ORTHO05D004266 3.4e-57 226.1 251 51.0
SEGI_32565 Sequoiadendron giganteum HOM05D003579 ORTHO05D004266 1.1e-52 211.1 200 55.5
CBR_g4012 Chara braunii HOM05D003579 ORTHO05D004266 2.4e-50 203.4 280 45.0
QL10p037085 Quercus lobata HOM05D003579 ORTHO05D004266 7.2e-47 191.8 160 65.6
Psat0s1042g0080 Pisum sativum HOM05D003579 ORTHO05D004266 4.6e-46 189.1 267 45.3
BolC5t33211H Brassica oleracea HOM05D003579 ORTHO05D004266 7.4e-44 181.8 160 65.6
BraA05t21815Z Brassica rapa HOM05D003579 ORTHO05D004266 1.4e-42 177.6 270 46.3
BraA05t21823Z Brassica rapa HOM05D003579 ORTHO05D004266 7.2e-39 165.2 160 62.5
C05p44830 Brassica napus HOM05D003579 ORTHO05D004266 1.6e-38 164.1 157 61.1
Lalb_Chr14g0370481 Lupinus albus HOM05D003579 ORTHO05D004266 3.9e-37 159.5 155 60.0
MCO02G001 Micromonas commoda HOM05D003579 ORTHO05D004266 1.1e-36 157.9 272 37.5
ClCG04G012750 Citrullus lanatus HOM05D003579 ORTHO05D004266 1.5e-36 157.5 117 65.8
Cre13.g607450 Chlamydomonas reinhardtii HOM05D003579 ORTHO05D004266 1.9e-31 140.6 279 35.5
arahy.Tifrunner.gnm1.ann1.IG3GCS Arachis hypogaea HOM05D000921 ORTHO05D002852 7.0e-26 122.1 84 72.6
PRCOL_00004885 Prasinoderma coloniale HOM05D003579 ORTHO05D004266 3.2e-23 113.2 285 33.3
Oeu016195.1 Olea europaea HOM05D003579 ORTHO05D004266 2.6e-20 103.6 117 51.3
Cc04_g09220 Coffea canephora HOM05D003579 ORTHO05D004266 6.5e-16 89.0 64 67.2
QL10p038058 Quercus lobata HOM05D003579 ORTHO05D004266 2.1e-14 84.0 55 70.9
Cfa023793 Carpinus fangiana HOM05D003579 ORTHO05D004266 1.4e-13 81.3 213 27.7
SGA_v2.0_scaffold67G22627 Striga asiatica HOM05D003579 ORTHO05D004266 4.0e-13 79.7 52 65.4
Pp3c3_29160 Physcomitrium patens HOM05D003579 ORTHO05D004266 1.5e-12 77.8 195 30.8
Glyma.15G201250 Glycine max HOM05D003579 ORTHO05D004266 2.6e-12 77.0 52 69.2
Ah.14g085880 Amaranthus hybridus HOM05D003579 ORTHO05D004266 1.7e-11 74.3 46 69.6
SEGI_07046 Sequoiadendron giganteum HOM05D003579 ORTHO05D004266 5.4e-10 69.3 54 63.0
Lj5g0002346 Lotus japonicus HOM05D003579 ORTHO05D004266 3.5e-09 66.6 54 55.6
Sopen09g023790 Solanum pennellii HOM05D003579 ORTHO05D004266 4.5e-09 66.2 52 61.5
Sopen11g021990 Solanum pennellii HOM05D003579 ORTHO05D004266 4.5e-09 66.2 52 61.5
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 1.9e-07 60.8 39 69.2
Lsat_1_v5_gn_3_63580 Lactuca sativa HOM05D003579 ORTHO05D004266 4.3e-07 59.7 35 74.3
Oeu016194.1 Olea europaea HOM05D002938 ORTHO05D002074 1.6e-06 57.8 54 57.4
Lalb_Chr14g0370491 Lupinus albus HOM05D003579 ORTHO05D004266 8.0e-06 55.5 49 51.0


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