Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17413 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-63 245.0 125 100.0
BcaB02g11539 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-50 201.1 136 80.1
BcaB02g11474 Brassica carinata HOM05D000589 ORTHO05D013242 7.0e-47 190.7 109 90.8
BcaB06g26956 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-43 179.1 122 81.1
BcaB01g01135 Brassica carinata HOM05D000589 ORTHO05D001885 2.0e-41 172.6 104 82.7
BcaNung05686 Brassica carinata HOM05D000589 ORTHO05D090921 7.5e-33 144.1 96 82.3
BcaB05g23573 Brassica carinata HOM05D000589 ORTHO05D013242 8.3e-32 140.6 83 90.4
BcaB02g11088 Brassica carinata HOM05D000589 ORTHO05D091396 1.1e-31 140.2 98 78.6
BcaB07g33413 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-23 112.1 56 94.6
BcaC08g42891 Brassica carinata HOM05D000044 ORTHO05D002654 1.1e-18 97.1 56 83.9
BcaC04g21586 Brassica carinata HOM05D000589 ORTHO05D001885 6.8e-18 94.4 54 83.3
BcaC02g12351 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-17 92.4 57 80.7
BcaC05g25328 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-16 89.7 54 81.5
BcaB05g22907 Brassica carinata HOM05D000589 ORTHO05D001885 2.9e-16 89.0 54 81.5
BolC6t35247H Brassica oleracea HOM05D000589 ORTHO05D001885 2.9e-16 89.0 54 81.5
BcaC01g05797 Brassica carinata HOM05D000589 ORTHO05D001885 3.7e-16 88.6 54 79.6
BcaC05g28348 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-15 86.3 54 75.9
C08p03150 Brassica napus HOM05D000930 ORTHO05D000748 1.9e-15 86.3 57 77.2
BcaC05g29003 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-15 85.9 55 76.4
BcaC05g29611 Brassica carinata HOM05D000589 ORTHO05D000401 3.2e-15 85.5 47 87.2
BcaC06g33723 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-15 85.5 54 81.5
BcaB05g24472 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-15 85.1 54 81.5
BcaC03g16729 Brassica carinata HOM05D000589 ORTHO05D004260 4.1e-15 85.1 54 75.9
BolC1t01662H Brassica oleracea HOM05D000589 ORTHO05D001885 2.1e-14 82.8 46 87.0
BcaC08g45067 Brassica carinata HOM05D000589 ORTHO05D001885 6.0e-14 81.3 57 73.7
BcaB01g01573 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-13 79.7 57 73.7
BcaC02g08929 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-13 78.6 51 74.5
BcaC04g19792 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-13 78.6 54 70.4
BcaC05g25870 Brassica carinata HOM05D000589 ORTHO05D001885 3.9e-13 78.6 54 70.4
BcaB06g27778 Brassica carinata HOM05D000589 ORTHO05D001885 6.6e-13 77.8 54 70.4
BcaC03g15149 Brassica carinata HOM05D000589 ORTHO05D001885 1.9e-12 76.3 59 64.4
BolC6t38390H Brassica oleracea HOM05D000589 ORTHO05D000401 1.9e-12 76.3 48 75.0
BcaB02g07028 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-12 75.9 54 72.2
BcaB08g36271 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-12 75.5 67 65.7
BcaC02g08590 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-12 75.5 55 69.1
BcaC05g28209 Brassica carinata HOM05D000589 ORTHO05D001885 3.3e-12 75.5 55 70.9
BolC8t47924H Brassica oleracea HOM05D000589 ORTHO05D000401 3.3e-12 75.5 48 77.1
BcaC06g34173 Brassica carinata HOM05D000589 ORTHO05D001885 4.3e-12 75.1 72 55.6
BcaB01g01311 Brassica carinata HOM05D000589 ORTHO05D001885 7.3e-12 74.3 55 67.3
BcaB02g07029 Brassica carinata HOM05D000589 ORTHO05D001885 7.3e-12 74.3 53 71.7
BcaB07g32905 Brassica carinata HOM05D000589 ORTHO05D001885 7.3e-12 74.3 54 66.7
BcaC03g14470 Brassica carinata HOM05D000589 ORTHO05D001885 7.3e-12 74.3 48 75.0
BcaB05g22699 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-11 73.6 54 70.4
BcaC02g08655 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-11 73.6 54 66.7
BcaB06g28242 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-11 72.8 60 66.7
BcaC06g33454 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-11 72.8 55 69.1
BcaC07g38282 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-11 72.8 54 70.4
BolC4t25876H Brassica oleracea HOM05D000589 ORTHO05D001885 2.1e-11 72.8 57 61.4
BcaC04g22605 Brassica carinata HOM05D000589 ORTHO05D001885 2.8e-11 72.4 56 64.3
BcaB07g32349 Brassica carinata HOM05D000589 ORTHO05D001885 3.6e-11 72.0 54 63.0
BraA01t03046Z Brassica rapa HOM05D000589 ORTHO05D001885 3.6e-11 72.0 55 67.3
BraA08t32605Z Brassica rapa HOM05D000589 ORTHO05D001885 3.6e-11 72.0 55 67.3
BcaC07g38195 Brassica carinata HOM05D000589 ORTHO05D001885 4.7e-11 71.6 54 64.8
BcaC02g11767 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-11 71.2 57 63.2
BcaC08g45585 Brassica carinata HOM05D000589 ORTHO05D001885 6.2e-11 71.2 45 75.6
BcaB01g01446 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-11 70.9 54 66.7
BcaB01g02139 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-11 70.9 54 66.7
BcaB02g09875 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-11 70.9 54 66.7
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 8.1e-11 70.9 55 67.3
BcaC05g25861 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-11 70.9 56 62.5
BcaC09g51508 Brassica carinata HOM05D000589 ORTHO05D001885 8.1e-11 70.9 56 62.5
BcaNung04078 Brassica carinata HOM05D000589 ORTHO05D001885 1.1e-10 70.5 55 69.1
BcaC06g36449 Brassica carinata HOM05D001498 ORTHO05D008559 1.4e-10 70.1 57 66.7
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.4e-10 70.1 57 66.7
BolC6t36239H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-10 70.1 57 66.7
BolC6t37491H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-10 70.1 57 66.7
BcaB03g15491 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-10 69.7 54 61.1
BcaB06g27274 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-10 69.7 56 64.3
BcaC05g25264 Brassica carinata HOM05D000589 ORTHO05D001885 1.8e-10 69.7 61 59.0
BcaNung01371 Brassica carinata HOM05D000589 ORTHO05D039362 1.8e-10 69.7 54 64.8
BcaC09g48394 Brassica carinata HOM05D000589 ORTHO05D001885 2.3e-10 69.3 55 65.5
BolC3t18711H Brassica oleracea HOM05D000589 ORTHO05D040045 2.3e-10 69.3 57 66.7
BraA07t28350Z Brassica rapa HOM05D000589 ORTHO05D001885 2.3e-10 69.3 55 63.6
BcaC03g18153 Brassica carinata HOM05D000589 ORTHO05D001885 3.1e-10 68.9 51 64.7
BraA02t07620Z Brassica rapa HOM05D000589 ORTHO05D001885 3.1e-10 68.9 56 62.5
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 3.1e-10 68.9 55 65.5
BcaC05g28962 Brassica carinata HOM05D000589 ORTHO05D001885 4.0e-10 68.6 56 66.1
BolC4t25855H Brassica oleracea HOM05D000589 ORTHO05D001885 4.0e-10 68.6 56 66.1
BcaC08g45829 Brassica carinata HOM05D000589 ORTHO05D001885 5.2e-10 68.2 54 64.8
BraA09t38531Z Brassica rapa HOM05D000589 ORTHO05D001885 5.2e-10 68.2 105 44.8
BraA08t32950Z Brassica rapa HOM05D000589 ORTHO05D001885 6.8e-10 67.8 56 64.3
BcaB01g05554 Brassica carinata HOM05D000589 ORTHO05D001885 8.9e-10 67.4 50 68.0
BolC8t49419H Brassica oleracea HOM05D000589 ORTHO05D001885 8.9e-10 67.4 57 64.9
BraA03t14502Z Brassica rapa HOM05D000589 ORTHO05D001885 8.9e-10 67.4 55 61.8
BcaC01g03921 Brassica carinata HOM05D000589 ORTHO05D040045 1.2e-09 67.0 57 64.9
BcaC08g44374 Brassica carinata HOM05D001498 ORTHO05D008559 1.2e-09 67.0 57 64.9
BolC9t54652H Brassica oleracea HOM05D000589 ORTHO05D001885 1.2e-09 67.0 57 64.9
BolC4t25125H Brassica oleracea HOM05D000589 ORTHO05D001885 1.5e-09 66.6 57 64.9
BolC6t38706H Brassica oleracea HOM05D000589 ORTHO05D001885 1.5e-09 66.6 57 64.9
BcaB05g21802 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-09 65.9 51 66.7
BcaB06g26227 Brassica carinata HOM05D000589 ORTHO05D001885 2.6e-09 65.9 54 63.0
BcaC04g20928 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-09 65.5 54 66.7
BcaC08g44546 Brassica carinata HOM05D000589 ORTHO05D001885 3.4e-09 65.5 105 44.8
BolC9t57315H Brassica oleracea HOM05D000589 ORTHO05D001885 4.4e-09 65.1 57 63.2
BcaB03g15329 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-09 64.7 54 63.0
BcaC01g00334 Brassica carinata HOM05D000589 ORTHO05D001885 5.8e-09 64.7 54 61.1
BcaC04g22355 Brassica carinata HOM05D000589 ORTHO05D001885 7.5e-09 64.3 54 63.0
BolC8t49278H Brassica oleracea HOM05D000589 ORTHO05D001885 7.5e-09 64.3 50 66.0
BcaC04g22612 Brassica carinata HOM05D000589 ORTHO05D001885 1.3e-08 63.5 54 61.1
BolC7t42427H Brassica oleracea HOM05D000589 ORTHO05D001885 1.3e-08 63.5 54 63.0
BcaC07g38292 Brassica carinata HOM05D000589 ORTHO05D001885 1.7e-08 63.2 54 59.3
BcaB04g18988 Brassica carinata HOM05D000589 ORTHO05D001885 2.2e-08 62.8 50 64.0
BraA04t17042Z Brassica rapa HOM05D000589 ORTHO05D001885 2.9e-08 62.4 50 64.0
BcaB06g27723 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-08 61.6 61 63.9
BcaC03g16344 Brassica carinata HOM05D000589 ORTHO05D001885 4.9e-08 61.6 54 59.3
BcaC03g15667 Brassica carinata HOM05D000589 ORTHO05D001885 6.4e-08 61.2 56 62.5
A09p34640 Brassica napus HOM05D000589 ORTHO05D001885 6.4e-08 61.2 54 63.0
BcaC02g08299 Brassica carinata HOM05D000589 ORTHO05D001885 1.4e-07 60.1 54 59.3
BolC9t55020H Brassica oleracea HOM05D000589 ORTHO05D001885 1.4e-07 60.1 52 63.5
BcaC04g20365 Brassica carinata HOM05D001498 ORTHO05D095589 1.9e-07 59.7 53 62.3
BcaC03g18011 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-07 59.3 41 68.3
BcaC04g18907 Brassica carinata HOM05D000589 ORTHO05D001885 2.4e-07 59.3 48 60.4
BcaC04g22653 Brassica carinata HOM05D000589 ORTHO05D016749 2.4e-07 59.3 48 64.6
BcaC06g34874 Brassica carinata HOM05D000589 ORTHO05D015460 2.4e-07 59.3 47 61.7
BolC4t26960H Brassica oleracea HOM05D000589 ORTHO05D001885 2.4e-07 59.3 48 60.4
BcaB02g10869 Brassica carinata HOM05D000589 ORTHO05D001885 3.2e-07 58.9 50 58.0
BcaB06g25993 Brassica carinata HOM05D000589 ORTHO05D001885 4.1e-07 58.5 46 63.0
BcaB08g34473 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-07 58.2 54 55.6
BcaC08g46754 Brassica carinata HOM05D000589 ORTHO05D001885 5.4e-07 58.2 50 58.0
BcaB01g02011 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-07 57.8 56 53.6
BcaB04g20296 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-07 57.8 54 55.6
BcaB04g20434 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-07 57.8 64 56.2
BcaC04g22510 Brassica carinata HOM05D000589 ORTHO05D001885 7.1e-07 57.8 56 53.6
BolC2t10463H Brassica oleracea HOM05D000589 ORTHO05D000401 7.1e-07 57.8 105 41.9
BcaC02g08679 Brassica carinata HOM05D000589 ORTHO05D001885 9.2e-07 57.4 46 63.0
A05p44020 Brassica napus HOM05D000589 ORTHO05D001885 9.2e-07 57.4 52 63.5
BcaC01g00898 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-06 57.0 48 60.4
BcaC04g21787 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-06 57.0 54 55.6
BcaC06g35166 Brassica carinata HOM05D000589 ORTHO05D001885 1.2e-06 57.0 48 60.4
C01p30550 Brassica napus HOM05D000589 ORTHO05D001885 1.2e-06 57.0 46 63.0
BolC1t02802H Brassica oleracea HOM05D000589 ORTHO05D000401 1.2e-06 57.0 51 62.7
BcaB05g24213 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-06 56.6 57 56.1
BcaC02g11766 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-06 56.6 75 48.0
BcaC09g50125 Brassica carinata HOM05D000589 ORTHO05D001885 1.6e-06 56.6 65 55.4
C03p80460 Brassica napus HOM05D000589 ORTHO05D001885 1.6e-06 56.6 48 64.6
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 1.6e-06 56.6 48 64.6
BolC8t48273H Brassica oleracea HOM05D000589 ORTHO05D001885 1.6e-06 56.6 55 61.8
BcaC06g33599 Brassica carinata HOM05D000589 ORTHO05D001885 2.1e-06 56.2 50 56.0
BcaC01g01963 Brassica carinata HOM05D000589 ORTHO05D001885 2.7e-06 55.8 48 56.2
BcaC06g35854 Brassica carinata HOM05D002078 ORTHO05D010191 2.7e-06 55.8 48 62.5
BcaC07g37959 Brassica carinata HOM05D000589 ORTHO05D093878 2.7e-06 55.8 45 62.2
BcaB01g04884 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-06 55.5 48 56.2
BcaB03g13920 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-06 55.5 54 59.3
BcaC01g05146 Brassica carinata HOM05D000589 ORTHO05D001885 3.5e-06 55.5 83 47.0
BolC1t02335H Brassica oleracea HOM05D000589 ORTHO05D001885 3.5e-06 55.5 55 60.0
BolC8t47336H Brassica oleracea HOM05D000589 ORTHO05D000401 3.5e-06 55.5 55 58.2
BcaC04g22143 Brassica carinata HOM05D000589 ORTHO05D001885 7.8e-06 54.3 52 53.8
BolC8t48988H Brassica oleracea HOM05D000589 ORTHO05D001885 7.8e-06 54.3 46 60.9


User provided reference genes

Program Settings