Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17388 Brassica carinata HOM05D009302 ORTHO05D010480 1.9e-68 262.3 129 100.0
BraA08t32476Z Brassica rapa HOM05D009302 ORTHO05D010480 1.0e-64 250.0 129 94.6
BcaC07g37110 Brassica carinata HOM05D009302 ORTHO05D010480 1.3e-64 249.6 129 95.3
BolC8t47278H Brassica oleracea HOM05D009302 ORTHO05D010480 1.3e-64 249.6 129 95.3
A08p04490 Brassica napus HOM05D009302 ORTHO05D010480 2.9e-64 248.4 129 94.6
C08p04790 Brassica napus HOM05D009302 ORTHO05D010480 1.1e-63 246.5 129 94.6
Sp1g35660 Schrenkiella parvula HOM05D009302 ORTHO05D010480 1.8e-53 212.6 126 82.5
Thhalv10011863m.g Eutrema salsugineum HOM05D009302 ORTHO05D010480 1.3e-51 206.5 127 83.5
AT1G48745 Arabidopsis thaliana HOM05D009302 ORTHO05D010480 8.8e-45 183.7 125 73.6
AL1G55450 Arabidopsis lyrata HOM05D009302 ORTHO05D010480 2.2e-43 179.1 114 78.1
BcaC07g37116 Brassica carinata HOM05D009302 ORTHO05D010480 8.2e-43 177.2 126 70.6
BolC8t47288H Brassica oleracea HOM05D009302 ORTHO05D010480 8.2e-43 177.2 126 70.6
CARHR038670 Cardamine hirsuta HOM05D009302 ORTHO05D010480 1.4e-42 176.4 128 71.1
BcaB04g17390 Brassica carinata HOM05D009302 ORTHO05D010480 4.1e-42 174.9 126 66.7
BraA08t32482Z Brassica rapa HOM05D009302 ORTHO05D010480 2.0e-41 172.6 126 66.7
BcaC07g37121 Brassica carinata HOM05D009302 ORTHO05D010480 5.0e-40 167.9 126 64.3
C08p04880 Brassica napus HOM05D009302 ORTHO05D010480 6.5e-40 167.5 140 63.6
BolC8t47296H Brassica oleracea HOM05D009302 ORTHO05D010480 1.1e-39 166.8 126 65.1
Carub.0001s3789 Capsella rubella HOM05D009302 ORTHO05D010480 1.1e-39 166.8 119 70.6
C08p04920 Brassica napus HOM05D009302 ORTHO05D010480 4.0e-37 158.3 115 66.1
Aa31LG10G4760 Aethionema arabicum HOM05D009302 ORTHO05D010480 8.3e-35 150.6 131 61.1
A08p04540 Brassica napus HOM05D009302 ORTHO05D010480 3.2e-31 138.7 98 66.3
BcaB02g11311 Brassica carinata HOM05D009302 ORTHO05D010480 1.6e-30 136.3 99 66.7
A08p04500 Brassica napus HOM05D009302 ORTHO05D010480 2.5e-23 112.5 126 51.6
BraA08t32477Z Brassica rapa HOM05D009302 ORTHO05D010480 1.8e-21 106.3 118 51.7
Ciclev10023366m.g Citrus clementina HOM05D010130 ORTHO05D010480 2.2e-11 72.8 82 52.4
Cpa.g.sc3.464 Carica papaya HOM05D009302 ORTHO05D010480 2.9e-11 72.4 83 45.8
Sabra15G0041000 Salix brachista HOM05D009302 ORTHO05D010480 5.4e-10 68.2 70 47.1
Prupe.5G224800 Prunus persica HOM05D010130 ORTHO05D010480 2.7e-09 65.9 80 48.8
CiPaw.16G089000 Carya illinoinensis HOM05D010130 ORTHO05D010480 8.6e-08 60.8 80 46.2
Atru.chr9.904 Acer truncatum HOM05D010130 ORTHO05D010480 1.9e-07 59.7 83 45.8
Aqoxy3G03833 Aquilegia oxysepala HOM05D009302 ORTHO05D010480 1.9e-07 59.7 70 50.0
FAN05G1532 Fragaria x ananassa HOM05D011814 ORTHO05D010480 2.5e-07 59.3 80 43.8
Thecc.03G041000 Theobroma cacao HOM05D010130 ORTHO05D010480 2.5e-07 59.3 78 43.6
FvH4_6g26821 Fragaria vesca HOM05D010130 ORTHO05D010480 5.6e-07 58.2 67 47.8
MBI16_g38077_MAGBIO Magnolia biondii HOM05D009302 ORTHO05D010480 1.2e-06 57.0 80 45.0
MBI16_g39818_MAGBIO Magnolia biondii HOM05D009302 ORTHO05D010480 1.2e-06 57.0 80 45.0
Nn3g17951 Nelumbo nucifera HOM05D009302 ORTHO05D010480 1.6e-06 56.6 88 39.8
QL10p026531 Quercus lobata HOM05D010130 ORTHO05D010480 1.6e-06 56.6 80 43.8
QL93p0217_0001 Quercus lobata HOM05D010130 ORTHO05D010480 1.6e-06 56.6 80 43.8
RcHm_v2.0_Chr7g0179421 Rosa chinensis HOM05D024595 ORTHO05D025356 6.2e-06 54.7 106 33.0


User provided reference genes

Program Settings