Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17383 Brassica carinata HOM05D000493 ORTHO05D093237 1.3e-61 239.6 123 100.0
BcaB05g24910 Brassica carinata HOM05D000493 ORTHO05D018702 2.5e-25 119.0 72 88.9
BcaB04g21131 Brassica carinata HOM05D000493 ORTHO05D001638 2.2e-21 105.9 125 56.8
BraA01t04179Z Brassica rapa HOM05D000493 ORTHO05D001638 2.9e-13 79.0 77 66.2
BNapus_Darmor_BZH_scaffold_145p00140 Brassica napus HOM05D000493 ORTHO05D001638 8.5e-13 77.4 77 64.9
BcaC09g48176 Brassica carinata HOM05D000493 ORTHO05D001638 1.1e-12 77.0 77 64.9
BolC1t05311H Brassica oleracea HOM05D000493 ORTHO05D001638 1.1e-12 77.0 77 64.9
Thhalv10020791m.g Eutrema salsugineum HOM05D000493 ORTHO05D001638 3.2e-12 75.5 97 54.6
CARHR086070 Cardamine hirsuta HOM05D000493 ORTHO05D001638 4.7e-11 71.6 73 61.6
Sp3g09760 Schrenkiella parvula HOM05D000493 ORTHO05D001638 2.3e-10 69.3 65 61.5
AT3G11520 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 3.9e-10 68.6 89 56.2
Carub.0003s1084 Capsella rubella HOM05D000493 ORTHO05D001638 1.1e-09 67.0 93 50.5
BcaB04g18645 Brassica carinata HOM05D000493 ORTHO05D001638 9.7e-09 63.9 68 55.9
BcaC05g28529 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-07 59.7 48 68.8
Aa31LG11G7130 Aethionema arabicum HOM05D000493 ORTHO05D001638 4.1e-07 58.5 114 42.1
AL3G23070 Arabidopsis lyrata HOM05D000493 ORTHO05D001638 9.1e-07 57.4 69 55.1
THA.LOC104809968 Tarenaya hassleriana HOM05D000493 ORTHO05D001638 1.5e-06 56.6 75 50.7
THA.LOC104816598 Tarenaya hassleriana HOM05D000493 ORTHO05D001638 3.4e-06 55.5 104 45.2
AT1G34460 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 7.7e-06 54.3 105 34.3
Carub.0006s0503 Capsella rubella HOM05D000493 ORTHO05D001638 7.7e-06 54.3 105 35.2


User provided reference genes

Program Settings