Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17310 Brassica carinata HOM05D005637 ORTHO05D006983 2.0e-40 168.7 86 100.0
BcaB03g12359 Brassica carinata HOM05D005637 ORTHO05D006983 6.3e-39 163.7 86 97.7
BcaB03g11995 Brassica carinata HOM05D005637 ORTHO05D006983 3.3e-32 141.4 78 91.0
A08p27370 Brassica napus HOM05D005637 ORTHO05D006983 3.7e-31 137.9 78 91.0
BraA08t34678Z Brassica rapa HOM05D005637 ORTHO05D006983 3.7e-31 137.9 78 91.0
Aa31LG7G8540 Aethionema arabicum HOM05D005637 ORTHO05D006983 4.8e-31 137.5 78 88.5
AL1G39180 Arabidopsis lyrata HOM05D005637 ORTHO05D006983 7.0e-30 133.7 78 89.7
Carub.0001s2449 Capsella rubella HOM05D005637 ORTHO05D006983 7.0e-30 133.7 78 89.7
AT1G26550 Arabidopsis thaliana HOM05D005637 ORTHO05D006983 2.0e-29 132.1 78 88.5
Sp1g22230 Schrenkiella parvula HOM05D005637 ORTHO05D006983 7.7e-29 130.2 78 87.2
Haze_07302 Corylus avellana HOM05D005637 ORTHO05D006983 1.9e-27 125.6 82 82.9
Hma1.2p1_0060F.1_g033550 Hydrangea macrophylla HOM05D005637 ORTHO05D006983 3.2e-27 124.8 81 81.5
Prupe.1G278400 Prunus persica HOM05D005637 ORTHO05D006983 4.2e-27 124.4 79 84.8
CARHR025420 Cardamine hirsuta HOM05D005637 ORTHO05D006983 5.5e-27 124.0 78 85.9
C05p24490 Brassica napus HOM05D005637 ORTHO05D006983 7.2e-27 123.6 79 84.8
BolC5t31183H Brassica oleracea HOM05D005637 ORTHO05D006983 7.2e-27 123.6 79 84.8
SalBow5G0960 Salvia bowleyana HOM05D005637 ORTHO05D006983 9.4e-27 123.2 79 81.0
DCAR_026064 Daucus carota HOM05D005637 ORTHO05D006983 2.7e-26 121.7 79 83.5
Lsat_1_v5_gn_1_14240 Lactuca sativa HOM05D005637 ORTHO05D006983 3.6e-26 121.3 78 79.5
TWI75G0754 Tripterygium wilfordii HOM05D005637 ORTHO05D006983 6.1e-26 120.6 81 74.1
Aqoxy3G03463 Aquilegia oxysepala HOM05D005637 ORTHO05D006983 1.8e-25 119.0 79 81.0
CSS0030079 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 3.0e-25 118.2 82 79.3
Manes.14G080801 Manihot esculenta HOM05D005637 ORTHO05D006983 3.0e-25 118.2 82 79.3
TAR496G0002 Trochodendron aralioides HOM05D005637 ORTHO05D006983 3.0e-25 118.2 82 80.5
TAR629G0341 Trochodendron aralioides HOM05D005637 ORTHO05D006983 3.0e-25 118.2 82 80.5
Actinidia04874 Actinidia chinensis HOM05D005637 ORTHO05D006983 6.7e-25 117.1 82 80.5
Dinv10648 Davidia involucrata HOM05D005637 ORTHO05D006983 1.2e-24 116.3 82 78.0
QL10p017509 Quercus lobata HOM05D005637 ORTHO05D006983 1.5e-24 115.9 82 79.3
Peaxi162Scf00106g00427 Petunia axillaris HOM05D005637 ORTHO05D006983 2.0e-24 115.5 80 80.0
Cpa.g.sc57.35 Carica papaya HOM05D005637 ORTHO05D006983 2.6e-24 115.2 81 77.8
Eucgr.G02481 Eucalyptus grandis HOM05D005637 ORTHO05D006983 3.3e-24 114.8 78 75.6
ECA247G3019 Erigeron canadensis HOM05D005637 ORTHO05D006983 7.5e-24 113.6 81 75.3
A09p39930 Brassica napus HOM05D005637 ORTHO05D006983 1.3e-23 112.8 79 79.7
BraA09t39492Z Brassica rapa HOM05D005637 ORTHO05D006983 1.3e-23 112.8 79 79.7
arahy.Tifrunner.gnm1.ann1.DXDM30 Arachis hypogaea HOM05D005637 ORTHO05D006983 3.7e-23 111.3 81 71.6
CANSAT80G0999 Cannabis sativa HOM05D005637 ORTHO05D006983 6.3e-23 110.5 81 74.1
CANSAT80G1152 Cannabis sativa HOM05D005637 ORTHO05D006983 6.3e-23 110.5 81 74.1
Thhalv10009046m.g Eutrema salsugineum HOM05D005637 ORTHO05D006983 6.3e-23 110.5 78 75.6
CiPaw.11G046600 Carya illinoinensis HOM05D005637 ORTHO05D006983 8.3e-23 110.2 87 66.7
Ciclev10022740m.g Citrus clementina HOM05D005637 ORTHO05D006983 1.1e-22 109.8 81 77.8
Migut.I00202 Erythranthe guttata HOM05D005637 ORTHO05D006983 1.1e-22 109.8 81 74.1
Sc04g0002850 Simmondsia chinensis HOM05D005637 ORTHO05D006983 1.4e-22 109.4 83 72.3
vmacro17563 Vaccinium macrocarpon HOM05D005637 ORTHO05D006983 2.4e-22 108.6 81 72.8
Psat5g200400 Pisum sativum HOM05D005637 ORTHO05D006983 3.1e-22 108.2 79 77.2
RcHm_v2.0_Chr4g0439331 Rosa chinensis HOM05D005637 ORTHO05D006983 3.1e-22 108.2 80 73.8
ATR0564G491 Amborella trichopoda HOM05D005637 ORTHO05D006983 4.1e-22 107.8 83 75.9
CsaV3_5G025290 Cucumis sativus L. HOM05D005637 ORTHO05D006983 1.6e-21 105.9 85 74.1
GSVIVG01007979001 Vitis vinifera HOM05D005637 ORTHO05D006983 1.6e-21 105.9 80 75.0
PGR119G0762 Punica granatum HOM05D005637 ORTHO05D006983 2.0e-21 105.5 80 72.5
FvH4_4g30970 Fragaria vesca HOM05D005637 ORTHO05D006983 2.7e-21 105.1 83 72.3
FAN17G1506 Fragaria x ananassa HOM05D005637 ORTHO05D006983 2.7e-21 105.1 83 72.3
Cc00_g08390 Coffea canephora HOM05D005637 ORTHO05D006983 5.9e-21 104.0 81 72.8
FAN22G0476 Fragaria x ananassa HOM05D005637 ORTHO05D006983 5.9e-21 104.0 83 71.1
Medtr3g037570 Medicago truncatula HOM05D005637 ORTHO05D006983 5.9e-21 104.0 80 75.0
CAN.G648.12 Capsicum annuum HOM05D005637 ORTHO05D006983 1.0e-20 103.2 82 73.2
EL10Ac5g11048 Beta vulgaris HOM05D005637 ORTHO05D006983 2.2e-20 102.1 82 72.0
FAN12G2219 Fragaria x ananassa HOM05D005637 ORTHO05D006983 2.2e-20 102.1 83 72.3
Nn2g15887 Nelumbo nucifera HOM05D005637 ORTHO05D006983 2.2e-20 102.1 49 91.8
TPR.G11903 Trifolium pratense HOM05D005637 ORTHO05D006983 2.2e-20 102.1 49 91.8
Os09g0411700 Oryza sativa ssp. japonica HOM05D005637 ORTHO05D006983 2.9e-20 101.7 84 69.0
Potri.008G089900 Populus trichocarpa HOM05D005637 ORTHO05D006983 6.5e-20 100.5 49 89.8
Sabra08G0067300 Salix brachista HOM05D005637 ORTHO05D006983 6.5e-20 100.5 49 89.8
Ah.02g113660 Amaranthus hybridus HOM05D005637 ORTHO05D006983 1.9e-19 99.0 82 68.3
PSO832G2445 Papaver somniferum HOM05D005637 ORTHO05D006983 4.2e-19 97.8 78 71.8
Hund02632 Selenicereus undatus HOM05D005637 ORTHO05D006983 4.2e-19 97.8 83 66.3
PGSC0003DMG400021937 Solanum tuberosum HOM05D005637 ORTHO05D006983 4.2e-19 97.8 81 67.9
Zm00001eb312430 Zea mays HOM05D005637 ORTHO05D006983 5.5e-19 97.4 87 66.7
HPP92_011002 Vanilla planifolia HOM05D005637 ORTHO05D006983 7.2e-19 97.1 82 68.3
LjContig00102g0010410 Lotus japonicus HOM05D005637 ORTHO05D006983 9.4e-19 96.7 47 89.4
AUR62021650 Chenopodium quinoa HOM05D005637 ORTHO05D006983 1.6e-18 95.9 83 69.9
AUR62008440 Chenopodium quinoa HOM05D005637 ORTHO05D006983 2.7e-18 95.1 83 69.9
Phvul.009G185800 Phaseolus vulgaris HOM05D005637 ORTHO05D006983 2.7e-18 95.1 47 87.2
MELO3C002951.2 Cucumis melo HOM05D005637 ORTHO05D006983 3.6e-18 94.7 50 90.0
Pp3c26_7640 Physcomitrium patens HOM05D005637 ORTHO05D006983 3.6e-18 94.7 83 67.5
CDE02G3019 Ceratophyllum demersum HOM05D005637 ORTHO05D006983 4.7e-18 94.4 87 63.2
MBI04_g11434_MAGBIO Magnolia biondii HOM05D005637 ORTHO05D006983 4.7e-18 94.4 68 72.1
arahy.Tifrunner.gnm1.ann1.38D1EG Arachis hypogaea HOM05D005637 ORTHO05D006983 6.1e-18 94.0 70 72.9
Lalb_Chr08g0235561 Lupinus albus HOM05D005637 ORTHO05D006983 1.4e-17 92.8 80 67.5
MD00G1081600 Malus domestica HOM05D005637 ORTHO05D006983 1.8e-17 92.4 80 67.5
Gohir.A07G064200 Gossypium hirsutum HOM05D005637 ORTHO05D006983 2.3e-17 92.0 44 90.9
FAN07G0507 Fragaria x ananassa HOM05D005637 ORTHO05D006983 3.0e-17 91.7 85 63.5
Glyma.06G195800 Glycine max HOM05D005637 ORTHO05D006983 3.0e-17 91.7 43 90.7
THA.LOC104822041 Tarenaya hassleriana HOM05D005637 ORTHO05D006983 3.0e-17 91.7 42 95.2
VMungo1309G0753 Vigna mungo HOM05D005637 ORTHO05D006983 3.0e-17 91.7 43 90.7
Duzib068G0698 Durio zibethinus HOM05D005637 ORTHO05D006983 4.0e-17 91.3 42 92.9
Duzib205G1800 Durio zibethinus HOM05D005637 ORTHO05D006983 4.0e-17 91.3 42 92.9
Glyma.04G166700 Glycine max HOM05D005637 ORTHO05D006983 4.0e-17 91.3 43 90.7
Gohir.D07G069000 Gossypium hirsutum HOM05D005637 ORTHO05D006983 4.0e-17 91.3 42 92.9
Gorai.001G072500 Gossypium raimondii HOM05D005637 ORTHO05D006983 4.0e-17 91.3 42 92.9
Oeu052447.1 Olea europaea HOM05D005637 ORTHO05D006983 4.0e-17 91.3 42 92.9
Ca_14657_v3 Cicer arietinum L. HOM05D005637 ORTHO05D006983 8.8e-17 90.1 82 63.4
Manes.06G090201 Manihot esculenta HOM05D005637 ORTHO05D006983 8.8e-17 90.1 82 64.6
SGA_v2.0_scaffold313G48341 Striga asiatica HOM05D005637 ORTHO05D006983 8.8e-17 90.1 43 88.4
Thecc.03G093000 Theobroma cacao HOM05D005637 ORTHO05D006983 8.8e-17 90.1 42 90.5
COL.COLO4_36923 Corchorus olitorius HOM05D005637 ORTHO05D006983 1.2e-16 89.7 42 90.5
arahy.Tifrunner.gnm1.ann1.KT0WW2 Arachis hypogaea HOM05D005637 ORTHO05D006983 1.5e-16 89.4 81 63.0
arahy.Tifrunner.gnm1.ann1.M53U4W Arachis hypogaea HOM05D005637 ORTHO05D006983 1.5e-16 89.4 81 63.0
ClCG09G021890 Citrullus lanatus HOM05D005637 ORTHO05D006983 1.5e-16 89.4 85 69.4
Nitab4.5_0001195g0050 Nicotiana tabacum HOM05D005637 ORTHO05D006983 1.5e-16 89.4 44 86.4
Nitab4.5_0001997g0100 Nicotiana tabacum HOM05D005637 ORTHO05D006983 1.5e-16 89.4 44 86.4
CSS0002747 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 2.0e-16 89.0 44 88.6
Rhsim08G0152700 Rhododendron simsii HOM05D005637 ORTHO05D006983 2.0e-16 89.0 81 65.4
unitig_748.g7812 Utricularia gibba HOM05D005637 ORTHO05D006983 3.4e-16 88.2 42 90.5
MBI02_g20483_MAGBIO Magnolia biondii HOM05D005637 ORTHO05D006983 4.4e-16 87.8 66 65.2
Mapoly0082s0039 Marchantia polymorpha HOM05D005637 ORTHO05D006983 5.7e-16 87.4 81 61.7
Sopen12g016310 Solanum pennellii HOM05D005637 ORTHO05D006983 7.5e-16 87.0 81 63.0
BcaC06g35140 Brassica carinata HOM05D005637 ORTHO05D006983 9.8e-16 86.7 78 66.7
SMO367G1093 Selaginella moellendorffii HOM05D005637 ORTHO05D006983 1.3e-15 86.3 84 60.7
AagrBONN_evm.TU.Sc2ySwM_228.632 Anthoceros agrestis HOM05D005637 ORTHO05D006983 1.7e-15 85.9 81 61.7
AagrBONN_evm.TU.Sc2ySwM_362.586 Anthoceros agrestis HOM05D005637 ORTHO05D006983 3.7e-15 84.7 81 60.5
MD16G1068800 Malus domestica HOM05D005637 ORTHO05D006983 8.3e-15 83.6 58 79.3
Ah.02g113670 Amaranthus hybridus HOM05D005637 ORTHO05D006983 1.4e-14 82.8 115 50.4
Solyc12g036200.2 Solanum lycopersicum HOM05D005637 ORTHO05D006983 1.8e-14 82.4 81 60.5
CBR_g30502 Chara braunii HOM05D005637 ORTHO05D006983 5.4e-14 80.9 47 76.6
BcaC03g15376 Brassica carinata HOM05D005637 ORTHO05D006983 6.6e-12 73.9 87 57.5
CSS0009360 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 2.5e-11 72.0 68 64.7
HanXRQChr04g0107301 Helianthus annuus HOM05D005637 ORTHO05D006983 9.5e-11 70.1 32 90.6
Atru.chr9.197 Acer truncatum HOM05D005637 ORTHO05D006983 1.6e-10 69.3 33 90.9
LjContig00103g0026967 Lotus japonicus HOM05D005637 ORTHO05D006983 2.1e-10 68.9 92 52.2
Pp3c15_19380 Physcomitrium patens HOM05D005637 ORTHO05D308751 1.4e-09 66.2 44 63.6
Sabra10G0125900 Salix brachista HOM05D005637 ORTHO05D006983 9.8e-08 60.1 88 40.9
CSS0048520 Camellia sinensis var. sinensis HOM05D005637 ORTHO05D006983 1.7e-07 59.3 30 83.3
LjContig00261g0007071 Lotus japonicus HOM05D005637 ORTHO05D006983 4.9e-07 57.8 81 50.6


User provided reference genes

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