Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17155 Brassica carinata HOM05D010933 ORTHO05D013136 3.6e-41 171.0 79 100.0
Sp1g38930 Schrenkiella parvula HOM05D010933 ORTHO05D013136 4.0e-32 141.0 76 85.5
BolC3t21384H Brassica oleracea HOM05D010933 ORTHO05D013136 9.9e-31 136.3 80 80.0
BcaC01g01321 Brassica carinata HOM05D010933 ORTHO05D013136 3.8e-30 134.4 80 78.8
C03p90620 Brassica napus HOM05D010933 ORTHO05D013136 6.4e-30 133.7 80 77.5
A08p02170 Brassica napus HOM05D010933 ORTHO05D013136 1.4e-29 132.5 75 81.3
BraA08t32264Z Brassica rapa HOM05D010933 ORTHO05D013136 1.9e-29 132.1 75 81.3
BcaC01g01322 Brassica carinata HOM05D010933 ORTHO05D013136 4.1e-29 131.0 76 78.9
CARHR042480 Cardamine hirsuta HOM05D010933 ORTHO05D013136 1.0e-27 126.3 75 77.3
AL1G60560 Arabidopsis lyrata HOM05D010933 ORTHO05D013136 3.0e-27 124.8 75 74.7
AT1G52342 Arabidopsis thaliana HOM05D010933 ORTHO05D013136 5.6e-26 120.6 73 78.1
BcaC08g43411 Brassica carinata HOM05D010933 ORTHO05D013136 7.3e-26 120.2 79 73.4
AL4G13500 Arabidopsis lyrata HOM05D010933 ORTHO05D013136 1.6e-25 119.0 76 75.0
C06p13920 Brassica napus HOM05D010933 ORTHO05D013136 4.9e-22 107.5 72 72.2
Carub.0001s4134 Capsella rubella HOM05D010933 ORTHO05D013136 3.5e-12 74.7 79 55.7
Aa31LG10G2570 Aethionema arabicum HOM05D010933 ORTHO05D013136 2.1e-09 65.5 39 71.8
Manes.03G019500 Manihot esculenta HOM05D007609 ORTHO05D009539 9.0e-08 60.1 74 39.2
Solyc06g066700.1 Solanum lycopersicum HOM05D007609 ORTHO05D009539 9.0e-08 60.1 78 35.9
Nitab4.5_0005851g0050 Nicotiana tabacum HOM05D007609 ORTHO05D009539 2.0e-07 58.9 75 42.7
SGA_v2.0_scaffold5G02584 Striga asiatica HOM05D007609 ORTHO05D009539 4.5e-07 57.8 56 42.9
Ca_25525_v3 Cicer arietinum L. HOM05D007609 ORTHO05D009539 5.8e-07 57.4 75 44.0
Sopen06g024990 Solanum pennellii HOM05D007609 ORTHO05D009539 5.8e-07 57.4 78 34.6
Cpa.g.sc451.1 Carica papaya HOM05D007609 ORTHO05D009539 7.6e-07 57.0 76 43.4
Lsat_1_v5_gn_4_103641 Lactuca sativa HOM05D007609 ORTHO05D009539 7.6e-07 57.0 74 39.2
TAR383G0714 Trochodendron aralioides HOM05D007609 ORTHO05D009539 1.7e-06 55.8 39 56.4
Medtr8g083460 Medicago truncatula HOM05D007609 ORTHO05D009539 2.2e-06 55.5 78 42.3
MELO3C024233.2 Cucumis melo HOM05D010933 ORTHO05D013136 3.8e-06 54.7 78 37.2
Gohir.D07G005100 Gossypium hirsutum HOM05D007609 ORTHO05D009539 3.8e-06 54.7 35 60.0
Aqoxy7G01699 Aquilegia oxysepala HOM05D007609 ORTHO05D009539 4.9e-06 54.3 52 46.2
CsaV3_7G033200 Cucumis sativus L. HOM05D010933 ORTHO05D013136 6.4e-06 53.9 78 35.9
Dinv38045 Davidia involucrata HOM05D007609 ORTHO05D009539 6.4e-06 53.9 55 45.5
Migut.I00869 Erythranthe guttata HOM05D007609 ORTHO05D009539 8.4e-06 53.5 32 65.6
Rhsim08G0221700 Rhododendron simsii HOM05D007609 ORTHO05D009539 8.4e-06 53.5 36 58.3
TPR.G35275 Trifolium pratense HOM05D007609 ORTHO05D009539 8.4e-06 53.5 42 57.1


User provided reference genes

Program Settings