Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16822 Brassica carinata HOM05D008937 ORTHO05D014946 1.2e-130 469.9 242 100.0
BcaC05g25261 Brassica carinata HOM05D008937 ORTHO05D014946 3.1e-59 232.6 199 64.8
C08p32540 Brassica napus HOM05D008937 ORTHO05D039228 2.1e-55 219.9 234 55.6
A09p33110 Brassica napus HOM05D008937 ORTHO05D014946 1.5e-53 213.8 199 61.3
BraA09t38855Z Brassica rapa HOM05D008937 ORTHO05D014946 1.5e-53 213.8 199 61.3
BcaB04g18071 Brassica carinata HOM05D008937 ORTHO05D014946 1.4e-51 207.2 222 56.3
C09p57380 Brassica napus HOM05D001407 ORTHO05D001314 1.8e-46 190.3 217 52.5
A06p18360 Brassica napus HOM05D008937 ORTHO05D000045 6.7e-46 188.3 217 52.1
BolC1t04274H Brassica oleracea HOM05D008937 ORTHO05D014946 1.1e-45 187.6 242 48.3
BcaC07g40034 Brassica carinata HOM05D008937 ORTHO05D039228 1.8e-43 180.3 233 48.9
BcaC05g28065 Brassica carinata HOM05D008937 ORTHO05D021603 4.1e-43 179.1 216 50.0
BraA02t07815Z Brassica rapa HOM05D000096 ORTHO05D014946 6.9e-43 178.3 217 50.7
BraA05t21675Z Brassica rapa HOM05D000096 ORTHO05D000045 1.3e-41 174.1 199 51.8
C01p31890 Brassica napus HOM05D008937 ORTHO05D021603 2.7e-39 166.4 234 46.6
BolC9t53769H Brassica oleracea HOM05D008937 ORTHO05D021603 7.4e-37 158.3 216 47.7
BolC9t54201H Brassica oleracea HOM05D008937 ORTHO05D021603 7.4e-37 158.3 216 47.7
C05p40790 Brassica napus HOM05D008937 ORTHO05D021603 1.7e-36 157.1 223 46.2
BolC4t25737H Brassica oleracea HOM05D008937 ORTHO05D021603 2.4e-35 153.3 211 47.9
BolC1t03182H Brassica oleracea HOM05D008937 ORTHO05D014946 2.0e-34 150.2 114 68.4
BraA05t20999Z Brassica rapa HOM05D008937 ORTHO05D014946 2.7e-31 139.8 143 57.3
A05p20930 Brassica napus HOM05D008937 ORTHO05D014946 8.0e-31 138.3 143 56.6
BcaC01g03267 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-30 137.1 242 43.0
A02p27730 Brassica napus HOM05D002315 ORTHO05D002416 4.0e-30 136.0 187 47.1
C01p41140 Brassica napus HOM05D008937 ORTHO05D014946 4.4e-29 132.5 143 55.2
BolC1t04069H Brassica oleracea HOM05D008937 ORTHO05D014946 4.4e-29 132.5 143 55.2
BcaC09g52226 Brassica carinata HOM05D008937 ORTHO05D032959 1.8e-27 127.1 239 42.3
C09p36130 Brassica napus HOM05D000096 ORTHO05D018655 5.2e-22 109.0 230 39.1
C01p32440 Brassica napus HOM05D008937 ORTHO05D014946 6.8e-22 108.6 111 55.0
BolC9t56977H Brassica oleracea HOM05D008937 ORTHO05D042932 7.5e-21 105.1 100 62.0
BcaB07g32588 Brassica carinata HOM05D008937 ORTHO05D000174 1.7e-20 104.0 89 59.6
A03p66740 Brassica napus HOM05D008937 ORTHO05D018655 1.7e-20 104.0 188 39.9
C05p38060 Brassica napus HOM05D008937 ORTHO05D018655 1.7e-20 104.0 189 40.7
BraA01t02807Z Brassica rapa HOM05D008937 ORTHO05D018655 1.7e-20 104.0 188 39.9
C01p09670 Brassica napus HOM05D000096 ORTHO05D032959 8.3e-20 101.7 239 37.7
BcaB01g01664 Brassica carinata HOM05D008937 ORTHO05D094534 1.8e-19 100.5 132 50.8
BcaC04g21060 Brassica carinata HOM05D008937 ORTHO05D018655 3.1e-19 99.8 254 35.4
C09p40970 Brassica napus HOM05D008937 ORTHO05D042932 4.1e-19 99.4 91 62.6
A02p09270 Brassica napus HOM05D000096 ORTHO05D000045 1.6e-18 97.4 231 37.7
C04p64610 Brassica napus HOM05D008937 ORTHO05D096619 1.6e-18 97.4 149 43.0
BraA04t16617Z Brassica rapa HOM05D008937 ORTHO05D032959 2.7e-18 96.7 143 47.6
C03p03040 Brassica napus HOM05D008937 ORTHO05D018655 5.0e-17 92.4 204 39.7
C07p14860 Brassica napus HOM05D008937 ORTHO05D018655 7.2e-16 88.6 109 48.6
A09p64020 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-15 87.8 242 34.3
C09p53860 Brassica napus HOM05D000096 ORTHO05D000045 3.6e-15 86.3 195 33.3
C04p41010 Brassica napus HOM05D000096 ORTHO05D000045 1.0e-14 84.7 200 32.5
BolC4t25684H Brassica oleracea HOM05D000096 ORTHO05D000045 1.0e-14 84.7 200 32.5
C03p27530 Brassica napus HOM05D000096 ORTHO05D000045 1.7e-12 77.4 119 44.5
A04p09210 Brassica napus HOM05D008937 ORTHO05D102207 5.4e-11 72.4 122 41.0
BolC2t07401H Brassica oleracea HOM05D011319 ORTHO05D031747 4.5e-10 69.3 234 31.2
C05p41780 Brassica napus HOM05D011319 ORTHO05D015453 8.6e-09 65.1 222 31.5
C06p15130 Brassica napus HOM05D008937 ORTHO05D098702 2.5e-08 63.5 86 41.9
BcaC07g42710 Brassica carinata HOM05D012553 ORTHO05D000174 7.3e-08 62.0 195 30.3
BraA02t05391Z Brassica rapa HOM05D011319 ORTHO05D015453 7.3e-08 62.0 106 37.7
BcaB03g16488 Brassica carinata HOM05D011319 ORTHO05D090986 9.5e-08 61.6 202 27.7
BolC8t51319H Brassica oleracea HOM05D011319 ORTHO05D015453 9.5e-08 61.6 109 37.6
BcaB04g17761 Brassica carinata HOM05D011319 ORTHO05D093524 1.6e-07 60.8 152 32.9
BolC9t56452H Brassica oleracea HOM05D000096 ORTHO05D000045 1.0e-06 58.2 153 35.9
BraA04t16689Z Brassica rapa HOM05D008937 ORTHO05D040956 1.0e-06 58.2 157 36.9
BolC5t32908H Brassica oleracea HOM05D011319 ORTHO05D015453 1.4e-06 57.8 107 39.3
C06p17110 Brassica napus HOM05D000096 ORTHO05D000045 2.3e-06 57.0 205 31.7
BcaB03g16431 Brassica carinata HOM05D011319 ORTHO05D094220 3.0e-06 56.6 220 26.8
BolC9t54268H Brassica oleracea HOM05D000096 ORTHO05D018655 6.8e-06 55.5 192 32.8
C03p73030 Brassica napus HOM05D000096 ORTHO05D000045 8.9e-06 55.1 149 30.9


User provided reference genes

Program Settings