Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16627 Brassica carinata HOM05D001224 ORTHO05D018563 3.3e-256 887.9 453 100.0
BcaB01g01374 Brassica carinata HOM05D001224 ORTHO05D018563 1.4e-140 503.8 399 72.4
BcaB05g22878 Brassica carinata HOM05D001224 ORTHO05D018563 1.3e-130 470.7 400 69.2
BcaB07g33214 Brassica carinata HOM05D001224 ORTHO05D018563 3.8e-111 406.0 301 75.4
BcaB04g17593 Brassica carinata HOM05D001224 ORTHO05D091055 3.7e-98 362.8 239 82.4
BcaB01g01200 Brassica carinata HOM05D001224 ORTHO05D018563 7.0e-97 358.6 269 74.0
BcaB04g16978 Brassica carinata HOM05D001224 ORTHO05D018563 2.0e-75 287.3 157 92.4
BcaB04g16977 Brassica carinata HOM05D001224 ORTHO05D010571 2.5e-70 270.4 296 58.1
BcaB02g11218 Brassica carinata HOM05D001224 ORTHO05D010571 2.3e-63 247.3 440 41.4
BcaB08g35070 Brassica carinata HOM05D001224 ORTHO05D010571 1.7e-58 231.1 377 43.2
BcaB06g27207 Brassica carinata HOM05D001224 ORTHO05D019989 3.3e-54 216.9 415 41.9
BcaB05g22948 Brassica carinata HOM05D001224 ORTHO05D010571 6.4e-50 202.6 174 67.2
C07p00680 Brassica napus HOM05D001224 ORTHO05D003542 1.6e-48 198.0 586 32.9
BcaC02g12294 Brassica carinata HOM05D001224 ORTHO05D014478 1.0e-47 195.3 485 36.7
BcaB04g17485 Brassica carinata HOM05D001224 ORTHO05D019989 1.5e-46 191.4 440 38.2
BcaB06g26680 Brassica carinata HOM05D001224 ORTHO05D018563 2.5e-46 190.7 305 41.6
BcaC08g43834 Brassica carinata HOM05D001224 ORTHO05D014478 1.6e-45 188.0 587 32.2
BcaB01g01037 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-44 184.9 403 36.7
BcaB03g16625 Brassica carinata HOM05D001224 ORTHO05D095114 1.4e-44 184.9 156 63.5
C05p44360 Brassica napus HOM05D001224 ORTHO05D014478 6.9e-44 182.6 560 32.0
BcaC02g09037 Brassica carinata HOM05D001224 ORTHO05D014478 9.0e-44 182.2 511 35.2
BcaB02g11186 Brassica carinata HOM05D001224 ORTHO05D092062 2.2e-42 177.6 310 41.0
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 4.9e-42 176.4 354 39.5
C04p55400 Brassica napus HOM05D001224 ORTHO05D003542 1.9e-41 174.5 581 31.0
BcaC05g28169 Brassica carinata HOM05D001224 ORTHO05D003044 4.2e-41 173.3 510 34.5
BcaB04g18242 Brassica carinata HOM05D001224 ORTHO05D010571 1.2e-40 171.8 379 40.1
BcaB05g22950 Brassica carinata HOM05D001224 ORTHO05D018563 1.6e-40 171.4 148 60.1
BcaB06g26317 Brassica carinata HOM05D001224 ORTHO05D010571 4.6e-40 169.9 334 36.8
BraA07t28368Z Brassica rapa HOM05D001224 ORTHO05D003542 1.5e-38 164.9 579 31.8
C07p12000 Brassica napus HOM05D001224 ORTHO05D003542 2.5e-38 164.1 218 45.9
C06p26600 Brassica napus HOM05D001224 ORTHO05D014478 1.3e-37 161.8 583 30.2
BcaC05g28451 Brassica carinata HOM05D001224 ORTHO05D014478 1.6e-37 161.4 598 30.6
BolC5t32336H Brassica oleracea HOM05D001224 ORTHO05D018692 1.4e-36 158.3 218 43.6
C01p45390 Brassica napus HOM05D001224 ORTHO05D003044 4.0e-36 156.8 211 44.1
C03p58290 Brassica napus HOM05D001224 ORTHO05D003542 2.0e-35 154.5 171 49.1
C04p05510 Brassica napus HOM05D001224 ORTHO05D003542 7.6e-35 152.5 199 45.7
C05p42050 Brassica napus HOM05D001224 ORTHO05D003044 1.1e-33 148.7 400 34.5
BcaB01g02584 Brassica carinata HOM05D001224 ORTHO05D019989 1.6e-32 144.8 266 40.6
C07p04250 Brassica napus HOM05D001224 ORTHO05D039145 1.6e-32 144.8 411 31.1
BcaC06g36171 Brassica carinata HOM05D001224 ORTHO05D014478 3.0e-31 140.6 569 30.1
C07p06950 Brassica napus HOM05D001224 ORTHO05D003044 1.5e-30 138.3 120 58.3
C04p09810 Brassica napus HOM05D002702 ORTHO05D003416 1.9e-30 137.9 462 30.7
BolC4t22590H Brassica oleracea HOM05D002776 ORTHO05D016111 1.9e-30 137.9 462 30.7
BolC1t04761H Brassica oleracea HOM05D001224 ORTHO05D003542 5.7e-30 136.3 171 46.8
BraA06t25784Z Brassica rapa HOM05D001224 ORTHO05D012331 2.2e-29 134.4 232 39.2
BcaB01g01183 Brassica carinata HOM05D001224 ORTHO05D019989 4.1e-28 130.2 256 41.8
C02p39480 Brassica napus HOM05D001224 ORTHO05D003044 4.1e-28 130.2 172 43.0
C07p01210 Brassica napus HOM05D001224 ORTHO05D003044 6.9e-28 129.4 254 38.6
BolC4t26388H Brassica oleracea HOM05D001224 ORTHO05D000395 9.0e-28 129.0 189 44.4
BcaC06g35068 Brassica carinata HOM05D002776 ORTHO05D012331 2.0e-27 127.9 411 31.4
BolC9t57112H Brassica oleracea HOM05D001224 ORTHO05D012331 4.5e-27 126.7 184 42.4
BraA01t02476Z Brassica rapa HOM05D001224 ORTHO05D003542 8.5e-26 122.5 410 31.7
C07p01170 Brassica napus HOM05D001224 ORTHO05D003044 1.1e-25 122.1 254 39.0
C04p09720 Brassica napus HOM05D001224 ORTHO05D016111 1.4e-25 121.7 137 48.2
BcaC05g26849 Brassica carinata HOM05D001224 ORTHO05D014478 2.5e-25 120.9 222 39.2
BcaB05g24223 Brassica carinata HOM05D001224 ORTHO05D019989 4.2e-25 120.2 318 37.1
BolC5t33261H Brassica oleracea HOM05D001224 ORTHO05D014478 7.2e-25 119.4 197 43.1
BolC6t36797H Brassica oleracea HOM05D001224 ORTHO05D003044 7.2e-25 119.4 169 45.0
BraA03t15286Z Brassica rapa HOM05D001224 ORTHO05D018692 6.1e-24 116.3 128 50.8
BcaB06g26645 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-23 115.2 278 37.4
BcaC06g36430 Brassica carinata HOM05D001224 ORTHO05D039145 6.7e-23 112.8 385 29.6
BcaC04g19844 Brassica carinata HOM05D001224 ORTHO05D012331 7.4e-22 109.4 401 30.7
C05p27320 Brassica napus HOM05D001224 ORTHO05D003044 9.7e-22 109.0 187 41.7
BcaC08g44195 Brassica carinata HOM05D001224 ORTHO05D014478 1.3e-21 108.6 540 29.1
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 3.7e-21 107.1 126 51.6
BcaB02g10769 Brassica carinata HOM05D002776 ORTHO05D012331 4.8e-21 106.7 345 28.4
BcaB06g26650 Brassica carinata HOM05D001224 ORTHO05D010571 1.4e-20 105.1 255 36.1
BcaB04g17704 Brassica carinata HOM05D001224 ORTHO05D096088 1.5e-19 101.7 344 32.8
A06p28400 Brassica napus HOM05D001224 ORTHO05D012331 2.6e-19 100.9 289 32.9
BcaB01g01568 Brassica carinata HOM05D001224 ORTHO05D096193 5.9e-19 99.8 95 56.8
BcaB03g16071 Brassica carinata HOM05D001224 ORTHO05D095856 7.7e-19 99.4 95 54.7
BcaB07g33163 Brassica carinata HOM05D012943 ORTHO05D027589 1.3e-18 98.6 166 41.0
BcaB02g11183 Brassica carinata HOM05D001224 ORTHO05D016074 2.2e-18 97.8 233 35.6
C09p42330 Brassica napus HOM05D001224 ORTHO05D012331 2.2e-18 97.8 157 41.4
BolC3t19387H Brassica oleracea HOM05D001224 ORTHO05D016111 6.5e-18 96.3 113 49.6
C05p45380 Brassica napus HOM05D001224 ORTHO05D003044 1.1e-17 95.5 158 38.0
A07p05880 Brassica napus HOM05D001224 ORTHO05D003044 1.9e-17 94.7 158 38.0
C07p13910 Brassica napus HOM05D001224 ORTHO05D012331 2.5e-17 94.4 384 28.4
C03p71030 Brassica napus HOM05D001224 ORTHO05D016111 3.2e-17 94.0 124 46.0
A10p08860 Brassica napus HOM05D001224 ORTHO05D003044 7.2e-17 92.8 141 37.6
C07p05350 Brassica napus HOM05D001224 ORTHO05D012331 7.2e-17 92.8 100 53.0
BcaC05g27783 Brassica carinata HOM05D001224 ORTHO05D000395 3.6e-16 90.5 362 29.3
BcaB06g27849 Brassica carinata HOM05D001224 ORTHO05D091028 7.9e-16 89.4 224 37.5
BolC4t23615H Brassica oleracea HOM05D001224 ORTHO05D003044 6.7e-15 86.3 127 40.9
A08p08820 Brassica napus HOM05D001224 ORTHO05D003044 8.8e-15 85.9 156 35.9
BcaB04g18021 Brassica carinata HOM05D001224 ORTHO05D092713 1.1e-14 85.5 204 32.8
BcaB06g26684 Brassica carinata HOM05D001224 ORTHO05D010571 5.7e-14 83.2 278 32.7
BolC5t31444H Brassica oleracea HOM05D001224 ORTHO05D003044 7.4e-14 82.8 330 31.2
C06p04820 Brassica napus HOM05D001224 ORTHO05D003044 3.7e-13 80.5 150 35.3
C05p36130 Brassica napus HOM05D001224 ORTHO05D010571 4.8e-13 80.1 144 44.4
C05p37780 Brassica napus HOM05D001224 ORTHO05D010571 8.2e-13 79.3 160 41.9
BolC1t03176H Brassica oleracea HOM05D001224 ORTHO05D010571 2.4e-12 77.8 172 39.0
BolC8t47204H Brassica oleracea HOM05D001224 ORTHO05D010571 2.4e-12 77.8 305 33.4
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 4.1e-12 77.0 77 49.4
BcaC03g17086 Brassica carinata HOM05D001224 ORTHO05D010571 4.1e-12 77.0 260 35.4
C01p48020 Brassica napus HOM05D001224 ORTHO05D010571 4.1e-12 77.0 142 43.0
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 7.0e-12 76.3 80 50.0
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 7.0e-12 76.3 101 43.6
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 7.0e-12 76.3 80 50.0
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 7.0e-12 76.3 80 50.0
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 7.0e-12 76.3 115 41.7
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 7.0e-12 76.3 101 43.6
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 7.0e-12 76.3 80 50.0
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 1.2e-11 75.5 72 50.0
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 2.0e-11 74.7 86 45.3
BolC9t59175H Brassica oleracea HOM05D001224 ORTHO05D042117 2.0e-11 74.7 144 43.1
C01p45400 Brassica napus HOM05D001224 ORTHO05D010571 2.6e-11 74.3 283 33.6
C06p04030 Brassica napus HOM05D012943 ORTHO05D039056 3.5e-11 73.9 259 29.3
BcaC09g48604 Brassica carinata HOM05D001224 ORTHO05D018692 4.5e-11 73.6 306 29.4
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 4.5e-11 73.6 95 44.2
C04p05530 Brassica napus HOM05D001224 ORTHO05D010571 4.5e-11 73.6 155 41.9
BolC8t49590H Brassica oleracea HOM05D001224 ORTHO05D003044 5.9e-11 73.2 55 67.3
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 1.0e-10 72.4 72 48.6
Thhalv10000427m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.0e-10 72.4 80 45.0
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-10 72.0 115 40.0
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 2.2e-10 71.2 130 39.2
BcaB07g33938 Brassica carinata HOM05D001224 ORTHO05D019989 2.2e-10 71.2 229 31.0
BcaB05g24682 Brassica carinata HOM05D001224 ORTHO05D016074 5.0e-10 70.1 49 69.4
Thhalv10028107m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 6.5e-10 69.7 80 43.8
BcaB03g16206 Brassica carinata HOM05D001224 ORTHO05D010571 8.5e-10 69.3 367 28.6
BcaB04g17428 Brassica carinata HOM05D002776 ORTHO05D091936 8.5e-10 69.3 146 34.2
A10p08880 Brassica napus HOM05D001224 ORTHO05D010571 8.5e-10 69.3 155 40.0
BolC9t55017H Brassica oleracea HOM05D002776 ORTHO05D003044 8.5e-10 69.3 91 44.0
C07p08920 Brassica napus HOM05D001224 ORTHO05D010571 1.1e-09 68.9 161 39.8
BolC2t09961H Brassica oleracea HOM05D001224 ORTHO05D012331 1.1e-09 68.9 117 32.5
BolC7t41307H Brassica oleracea HOM05D001224 ORTHO05D010571 1.1e-09 68.9 155 40.6
BcaB04g17609 Brassica carinata HOM05D001224 ORTHO05D019989 1.5e-09 68.6 325 28.9
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 1.5e-09 68.6 159 33.3
BcaC09g49626 Brassica carinata HOM05D002776 ORTHO05D023838 1.9e-09 68.2 69 44.9
A08p08810 Brassica napus HOM05D001224 ORTHO05D010571 2.5e-09 67.8 144 41.7
C05p27310 Brassica napus HOM05D001224 ORTHO05D010571 2.5e-09 67.8 155 40.6
C05p18370 Brassica napus HOM05D001224 ORTHO05D042117 3.2e-09 67.4 485 26.4
C07p12920 Brassica napus HOM05D001224 ORTHO05D016739 3.2e-09 67.4 316 28.5
Thhalv10000600m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.2e-09 67.0 79 43.0
C08p06670 Brassica napus HOM05D002776 ORTHO05D003044 5.5e-09 66.6 160 31.2
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 7.2e-09 66.2 137 32.1
BolC4t25341H Brassica oleracea HOM05D001224 ORTHO05D010571 9.4e-09 65.9 211 37.0
BolC5t30546H Brassica oleracea HOM05D001224 ORTHO05D010571 9.4e-09 65.9 155 40.0
BcaB05g23549 Brassica carinata HOM05D002776 ORTHO05D091522 1.2e-08 65.5 249 28.9
BcaC06g36115 Brassica carinata HOM05D012943 ORTHO05D032960 1.6e-08 65.1 123 36.6
Thhalv10010916m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 1.6e-08 65.1 80 42.5
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 2.1e-08 64.7 137 31.4
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 2.1e-08 64.7 137 31.4
C07p01220 Brassica napus HOM05D001224 ORTHO05D010571 2.1e-08 64.7 144 39.6
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 2.7e-08 64.3 247 28.3
BcaC01g02927 Brassica carinata HOM05D001224 ORTHO05D014478 2.7e-08 64.3 155 39.4
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 2.7e-08 64.3 247 29.6
C01p41550 Brassica napus HOM05D001224 ORTHO05D010571 2.7e-08 64.3 144 41.0
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 2.7e-08 64.3 189 27.5
BolC8t49589H Brassica oleracea HOM05D001224 ORTHO05D010571 2.7e-08 64.3 155 40.0
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 3.6e-08 63.9 247 29.1
BcaB05g22438 Brassica carinata HOM05D001224 ORTHO05D095127 4.7e-08 63.5 119 36.1
BcaB02g10182 Brassica carinata HOM05D000012 ORTHO05D009649 6.1e-08 63.2 93 44.1
BcaC06g35617 Brassica carinata HOM05D001224 ORTHO05D016739 8.0e-08 62.8 295 27.8
A01p25420 Brassica napus HOM05D001224 ORTHO05D014478 3.0e-07 60.8 331 29.0
BraA01t01573Z Brassica rapa HOM05D001224 ORTHO05D018692 3.9e-07 60.5 74 47.3
C07p01180 Brassica napus HOM05D001224 ORTHO05D010571 5.2e-07 60.1 138 37.0
BcaB04g18434 Brassica carinata HOM05D001224 ORTHO05D090692 6.7e-07 59.7 196 33.7
BolC1t03830H Brassica oleracea HOM05D001224 ORTHO05D012331 6.7e-07 59.7 115 37.4
BcaB06g25737 Brassica carinata HOM05D001224 ORTHO05D016074 8.8e-07 59.3 181 34.3
BcaB06g26475 Brassica carinata HOM05D001224 ORTHO05D093826 8.8e-07 59.3 54 63.0
BcaB06g27850 Brassica carinata HOM05D001224 ORTHO05D016074 8.8e-07 59.3 55 60.0
BcaC06g36017 Brassica carinata HOM05D001224 ORTHO05D016739 1.1e-06 58.9 159 30.8
BolC7t41183H Brassica oleracea HOM05D012943 ORTHO05D032960 1.1e-06 58.9 283 25.1
C01p38730 Brassica napus HOM05D001224 ORTHO05D012331 1.5e-06 58.5 354 25.7
C07p07620 Brassica napus HOM05D012943 ORTHO05D032960 1.5e-06 58.5 283 25.1
BcaC07g37040 Brassica carinata HOM05D001224 ORTHO05D010571 2.6e-06 57.8 321 29.9
BolC6t36715H Brassica oleracea HOM05D001224 ORTHO05D024547 3.3e-06 57.4 48 60.4
C03p58300 Brassica napus HOM05D001224 ORTHO05D010571 4.4e-06 57.0 305 30.5
Thhalv10000523m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.4e-06 57.0 105 36.2
BcaB06g27137 Brassica carinata HOM05D001224 ORTHO05D094047 5.7e-06 56.6 143 35.7


User provided reference genes

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