Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 2.7e-89 332.0 177 100.0
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 3.1e-85 318.5 177 95.5
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 1.6e-84 316.2 177 95.5
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 3.5e-84 315.1 177 94.9
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 2.9e-83 312.0 177 94.4
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 8.6e-83 310.5 177 93.8
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 2.4e-77 292.4 174 89.1
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 4.1e-77 291.6 174 89.1
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 9.2e-77 290.4 174 88.5
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 9.2e-77 290.4 174 89.1
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 4.5e-76 288.1 173 89.6
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 1.7e-75 286.2 174 87.4
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 5.0e-75 284.6 176 87.5
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 6.6e-75 284.3 174 88.5
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 8.6e-75 283.9 174 87.9
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 3.2e-69 265.4 176 80.7
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 9.2e-69 263.8 160 83.1
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 7.8e-68 260.8 158 83.5
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 3.6e-65 251.9 165 77.6
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 6.2e-65 251.1 178 75.3
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.4e-64 250.0 158 79.1
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 3.1e-64 248.8 157 78.3
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 5.2e-64 248.1 162 75.9
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 6.8e-64 247.7 161 78.9
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.2e-63 246.9 161 77.0
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 1.2e-63 246.9 169 75.1
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 1.2e-63 246.9 163 74.8
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 2.0e-63 246.1 164 73.8
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 3.4e-63 245.4 164 76.8
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 3.4e-63 245.4 156 80.8
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 4.4e-63 245.0 159 77.4
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 5.8e-63 244.6 169 75.7
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.7e-62 243.0 172 75.0
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 1.7e-62 243.0 170 74.1
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.7e-62 243.0 169 72.2
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 1.7e-62 243.0 163 74.2
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 2.2e-62 242.7 169 74.6
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 2.2e-62 242.7 171 71.9
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 2.2e-62 242.7 172 72.1
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 2.9e-62 242.3 161 76.4
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 2.9e-62 242.3 161 74.5
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 2.9e-62 242.3 176 71.6
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 2.9e-62 242.3 168 70.8
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 2.9e-62 242.3 160 75.0
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 3.7e-62 241.9 197 67.5
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 6.4e-62 241.1 161 75.2
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 8.3e-62 240.7 161 75.2
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 8.3e-62 240.7 169 71.0
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 1.4e-61 240.0 169 74.0
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 1.4e-61 240.0 169 75.1
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 1.9e-61 239.6 160 74.4
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 4.1e-61 238.4 161 72.0
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 4.1e-61 238.4 170 71.8
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 4.1e-61 238.4 161 73.9
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 9.2e-61 237.3 164 73.2
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 1.2e-60 236.9 175 73.1
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 2.7e-60 235.7 161 75.2
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 2.7e-60 235.7 164 73.2
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 4.6e-60 235.0 158 74.7
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 4.6e-60 235.0 157 74.5
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 6.0e-60 234.6 202 67.8
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 7.8e-60 234.2 177 70.6
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 1.3e-59 233.4 175 69.7
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 1.3e-59 233.4 162 71.6
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.7e-59 233.0 156 75.6
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 3.9e-59 231.9 167 69.5
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 5.1e-59 231.5 176 75.6
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 6.6e-59 231.1 167 71.9
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 6.6e-59 231.1 177 67.8
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 8.6e-59 230.7 166 71.1
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 8.6e-59 230.7 173 68.2
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.1e-58 230.3 168 71.4
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 2.5e-58 229.2 157 73.9
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 5.6e-58 228.0 175 68.6
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 9.5e-58 227.3 169 69.8
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 1.6e-57 226.5 158 70.3
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 2.8e-57 225.7 170 71.2
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 2.8e-57 225.7 157 73.2
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 4.7e-57 224.9 157 72.0
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 6.2e-57 224.6 170 70.0
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 8.1e-57 224.2 170 70.6
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 8.1e-57 224.2 155 73.5
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 1.1e-56 223.8 160 71.9
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 1.1e-56 223.8 166 68.1
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.4e-56 223.4 166 66.9
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 1.8e-56 223.0 167 70.1
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 3.1e-56 222.2 155 73.5
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 6.8e-56 221.1 159 71.1
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 8.9e-56 220.7 165 66.7
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 1.2e-55 220.3 171 69.0
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 2.6e-55 219.2 155 71.6
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 3.4e-55 218.8 155 71.6
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 3.4e-55 218.8 158 71.5
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 3.4e-55 218.8 171 69.0
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 5.8e-55 218.0 170 67.6
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 7.6e-55 217.6 169 65.1
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 1.3e-54 216.9 158 68.4
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 1.7e-54 216.5 155 70.3
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.2e-54 216.1 203 61.1
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 2.2e-54 216.1 155 70.3
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 3.7e-54 215.3 155 67.7
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 3.7e-54 215.3 170 67.1
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 4.9e-54 214.9 153 70.6
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 8.3e-54 214.2 158 67.1
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 2.4e-53 212.6 163 65.6
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 3.2e-53 212.2 134 83.6
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 5.4e-53 211.5 170 69.4
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.2e-52 210.3 158 65.8
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 4.6e-52 208.4 167 62.9
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 4.6e-52 208.4 158 69.6
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 6.0e-52 208.0 214 57.5
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 6.0e-52 208.0 167 64.1
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 1.3e-51 206.8 159 64.2
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 1.9e-50 203.0 119 87.4
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.9e-50 203.0 135 77.0
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 9.6e-50 200.7 158 63.9
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 2.8e-49 199.1 151 65.6
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.8e-48 196.4 156 61.5
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 5.2e-48 194.9 154 66.2
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 4.4e-47 191.8 130 70.8
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 7.6e-47 191.0 170 60.0
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 1.3e-46 190.3 153 62.1
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 6.4e-46 188.0 165 61.8
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 1.4e-45 186.8 164 61.0
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 1.3e-43 180.3 128 65.6
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 2.4e-40 169.5 157 58.0
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 9.0e-40 167.5 111 86.5
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.2e-39 167.2 104 77.9
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 3.8e-38 162.2 163 52.1
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 1.9e-37 159.8 137 60.6
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 3.2e-37 159.1 113 72.6
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 6.0e-36 154.8 112 71.4
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 1.7e-35 153.3 161 50.3
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 6.6e-35 151.4 117 67.5
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 1.1e-34 150.6 154 54.5
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 4.3e-34 148.7 112 67.9
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 3.6e-33 145.6 159 47.2
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 4.8e-33 145.2 157 52.2
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 6.2e-33 144.8 108 66.7
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.9e-27 125.6 87 78.2
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 3.9e-27 125.6 87 75.9
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 7.4e-26 121.3 84 71.4
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 1.3e-25 120.6 109 61.5
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 4.5e-23 112.1 66 92.4
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 1.3e-22 110.5 153 43.8
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 1.9e-21 106.7 88 68.2
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 6.0e-20 101.7 170 35.9
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 3.9e-19 99.0 59 86.4
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 3.9e-19 99.0 59 86.4
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 2.5e-18 96.3 69 69.6
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 2.1e-17 93.2 54 79.6
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 1.5e-15 87.0 123 46.3
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 7.6e-15 84.7 54 74.1
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.4e-13 80.5 56 75.0
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 4.2e-13 79.0 160 32.5
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 6.1e-12 75.1 151 35.1
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 7.9e-12 74.7 209 28.2
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 4.8e-09 65.5 45 71.1
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 5.9e-07 58.5 48 58.3


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