Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16477 Brassica carinata HOM05D004231 ORTHO05D004814 1.4e-157 559.7 300 100.0
BcaB03g16478 Brassica carinata HOM05D004231 ORTHO05D004814 4.9e-155 551.2 296 100.0
BolC7t41016H Brassica oleracea HOM05D004231 ORTHO05D004814 4.9e-155 551.2 296 100.0
C07p06030 Brassica napus HOM05D004231 ORTHO05D004814 1.2e-153 546.6 296 99.0
A07p03760 Brassica napus HOM05D004231 ORTHO05D004814 3.0e-152 542.0 296 98.0
BraA07t28164Z Brassica rapa HOM05D004231 ORTHO05D004814 3.0e-152 542.0 296 98.0
Sp3g30610 Schrenkiella parvula HOM05D004231 ORTHO05D004814 1.3e-147 526.6 296 94.9
C09p13290 Brassica napus HOM05D004231 ORTHO05D004814 2.2e-147 525.8 296 94.9
Thhalv10022738m.g Eutrema salsugineum HOM05D004231 ORTHO05D004814 2.9e-147 525.4 296 94.6
BolC9t54222H Brassica oleracea HOM05D004231 ORTHO05D004814 4.9e-147 524.6 296 94.6
A09p11260 Brassica napus HOM05D004231 ORTHO05D004814 6.4e-147 524.2 296 94.6
BraA09t36767Z Brassica rapa HOM05D004231 ORTHO05D004814 1.4e-146 523.1 296 94.3
BcaC04g22982 Brassica carinata HOM05D004231 ORTHO05D004814 4.1e-146 521.5 296 94.3
BcaB03g16474 Brassica carinata HOM05D004231 ORTHO05D004814 5.4e-146 521.2 295 94.9
BcaB07g31737 Brassica carinata HOM05D004231 ORTHO05D004814 4.6e-145 518.1 298 94.3
Carub.0003s3121 Capsella rubella HOM05D004231 ORTHO05D004814 6.0e-145 517.7 296 93.6
AL3G50130 Arabidopsis lyrata HOM05D004231 ORTHO05D004814 1.0e-144 516.9 296 92.9
AT2G17265 Arabidopsis thaliana HOM05D004231 ORTHO05D004814 2.3e-144 515.8 296 92.9
CARHR293610 Cardamine hirsuta HOM05D004231 ORTHO05D004814 4.7e-142 508.1 296 91.9
A06p34120 Brassica napus HOM05D004231 ORTHO05D004814 2.9e-139 498.8 296 90.9
C03p58080 Brassica napus HOM05D004231 ORTHO05D004814 6.4e-139 497.7 297 91.2
BolC3t18081H Brassica oleracea HOM05D004231 ORTHO05D004814 6.4e-139 497.7 297 91.2
BcaC01g02941 Brassica carinata HOM05D004231 ORTHO05D004814 8.4e-139 497.3 294 91.5
BraA06t26345Z Brassica rapa HOM05D004231 ORTHO05D004814 2.4e-138 495.7 296 90.5
Aa31LG2G14870 Aethionema arabicum HOM05D004231 ORTHO05D004814 1.5e-132 476.5 296 86.5
CARHR243620 Cardamine hirsuta HOM05D004231 ORTHO05D004814 2.4e-122 442.6 292 82.9
Carub.0007s0500 Capsella rubella HOM05D004231 ORTHO05D004814 2.7e-121 439.1 299 79.9
BcaC06g36249 Brassica carinata HOM05D004231 ORTHO05D004814 5.5e-114 414.8 229 99.1
Cpa.g.sc60.14 Carica papaya HOM05D004231 ORTHO05D004814 1.3e-107 393.7 284 77.1
Duzib052G0175 Durio zibethinus HOM05D004231 ORTHO05D004814 9.3e-106 387.5 296 74.3
Ciclev10028700m.g Citrus clementina HOM05D004231 ORTHO05D004814 2.7e-105 386.0 293 73.4
Potri.009G168400 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.8e-104 383.3 296 73.0
Sabra04G0139300 Salix brachista HOM05D004231 ORTHO05D004814 2.3e-104 382.9 294 73.8
Manes.01G017200 Manihot esculenta HOM05D004231 ORTHO05D004814 6.7e-104 381.3 295 73.9
PGR042G2635 Punica granatum HOM05D004231 ORTHO05D004814 6.7e-104 381.3 299 71.2
Potri.004G207000 Populus trichocarpa HOM05D004231 ORTHO05D004814 1.1e-103 380.6 293 73.7
Thecc.02G146400 Theobroma cacao HOM05D004231 ORTHO05D004814 1.5e-103 380.2 291 73.2
MD10G1142000 Malus domestica HOM05D004231 ORTHO05D004814 2.2e-102 376.3 298 72.8
FAN24G0296 Fragaria x ananassa HOM05D004231 ORTHO05D004814 6.3e-102 374.8 298 72.1
FAN27G2171 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.1e-101 374.0 298 71.8
FvH4_2g16830 Fragaria vesca HOM05D004231 ORTHO05D004814 1.8e-101 373.2 298 71.8
Prupe.8G180500 Prunus persica HOM05D004231 ORTHO05D004814 2.4e-101 372.9 298 71.8
TWI75G1214 Tripterygium wilfordii HOM05D004231 ORTHO05D004814 2.4e-101 372.9 297 70.0
Cfa005374 Carpinus fangiana HOM05D004231 ORTHO05D004814 6.9e-101 371.3 296 72.6
QL05p043527 Quercus lobata HOM05D004231 ORTHO05D004814 9.0e-101 370.9 299 72.2
CSS0007201 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 2.0e-100 369.8 306 70.9
FAN15G0610 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.0e-100 369.8 298 71.5
CANSAT25G0301 Cannabis sativa HOM05D004231 ORTHO05D004814 3.4e-100 369.0 292 72.6
ClCG02G003360 Citrullus lanatus HOM05D004231 ORTHO05D004814 4.5e-100 368.6 300 70.7
Lsat_1_v5_gn_8_121420 Lactuca sativa HOM05D004231 ORTHO05D004814 4.5e-100 368.6 305 70.8
Lalb_Chr12g0208621 Lupinus albus HOM05D004231 ORTHO05D004814 7.7e-100 367.9 296 70.3
MELO3C015708.2 Cucumis melo HOM05D004231 ORTHO05D004814 1.3e-99 367.1 300 71.0
CsaV3_7G001970 Cucumis sativus L. HOM05D004231 ORTHO05D004814 2.2e-99 366.3 300 71.0
Actinidia17992 Actinidia chinensis HOM05D004231 ORTHO05D004814 3.8e-99 365.5 303 71.6
Dinv14175 Davidia involucrata HOM05D004231 ORTHO05D004814 3.8e-99 365.5 299 70.9
RcHm_v2.0_Chr6g0280961 Rosa chinensis HOM05D004231 ORTHO05D004814 5.0e-99 365.2 298 71.1
HanXRQChr16g0515121 Helianthus annuus HOM05D004231 ORTHO05D004814 8.5e-99 364.4 269 75.5
Sopen04g003940 Solanum pennellii HOM05D004231 ORTHO05D004814 1.1e-98 364.0 302 67.9
Ca_10777_v3 Cicer arietinum L. HOM05D004231 ORTHO05D004814 1.4e-98 363.6 293 70.6
PGSC0003DMG400025309 Solanum tuberosum HOM05D004231 ORTHO05D004814 1.9e-98 363.2 261 75.1
Sed0021373 Sechium edule HOM05D004231 ORTHO05D004814 2.5e-98 362.8 298 70.1
Solyc04g008760.3 Solanum lycopersicum HOM05D004231 ORTHO05D004814 2.5e-98 362.8 302 67.5
SGA_v2.0_scaffold36G14389 Striga asiatica HOM05D004231 ORTHO05D004814 5.5e-98 361.7 283 70.0
CiPaw.06G115200 Carya illinoinensis HOM05D004231 ORTHO05D004814 9.4e-98 360.9 295 70.2
DCAR_006270 Daucus carota HOM05D004231 ORTHO05D004814 1.6e-97 360.1 259 77.2
Migut.N00847 Erythranthe guttata HOM05D004231 ORTHO05D004814 2.1e-97 359.8 287 69.3
LjContig00081g0001175 Lotus japonicus HOM05D004231 ORTHO05D004814 2.1e-97 359.8 262 76.0
Oeu005953.1 Olea europaea HOM05D004231 ORTHO05D004814 2.7e-97 359.4 285 71.2
Peaxi162Scf00362g00110 Petunia axillaris HOM05D004231 ORTHO05D004814 3.6e-97 359.0 251 76.9
Hma1.2p1_0652F.1_g195880 Hydrangea macrophylla HOM05D004231 ORTHO05D004814 4.6e-97 358.6 272 73.5
Peaxi162Scf00329g00312 Petunia axillaris HOM05D004231 ORTHO05D004814 4.6e-97 358.6 296 67.6
Ah.01g009950 Amaranthus hybridus HOM05D004231 ORTHO05D004814 6.1e-97 358.2 303 69.3
Nitab4.5_0000783g0100 Nicotiana tabacum HOM05D004231 ORTHO05D004814 6.1e-97 358.2 264 75.4
arahy.Tifrunner.gnm1.ann1.3XUX0K Arachis hypogaea HOM05D004231 ORTHO05D004814 7.9e-97 357.8 279 73.1
arahy.Tifrunner.gnm1.ann1.9M6UE0 Arachis hypogaea HOM05D004231 ORTHO05D004814 7.9e-97 357.8 279 73.1
CAN.G5871.1 Capsicum annuum HOM05D004231 ORTHO05D004814 1.0e-96 357.5 301 66.1
CDE05G1267 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 1.4e-96 357.1 290 69.7
CDE05G2018 Ceratophyllum demersum HOM05D004231 ORTHO05D004814 1.4e-96 357.1 277 72.2
Lalb_Chr07g0189301 Lupinus albus HOM05D004231 ORTHO05D004814 2.3e-96 356.3 294 68.0
Nitab4.5_0008730g0040 Nicotiana tabacum HOM05D004231 ORTHO05D004814 2.3e-96 356.3 310 65.5
Sed0027682 Sechium edule HOM05D004231 ORTHO05D004814 2.3e-96 356.3 300 70.7
MSTRG.25000 Avicennia marina HOM05D004231 ORTHO05D004814 3.0e-96 355.9 253 76.3
CSS0030147 Camellia sinensis var. sinensis HOM05D004231 ORTHO05D004814 6.7e-96 354.8 305 67.9
CiPaw.05G093400 Carya illinoinensis HOM05D004231 ORTHO05D004814 6.7e-96 354.8 295 68.5
Nitab4.5_0000129g0030 Nicotiana tabacum HOM05D004231 ORTHO05D004814 8.8e-96 354.4 310 65.2
Sc08g0002160 Simmondsia chinensis HOM05D004231 ORTHO05D004814 1.1e-95 354.0 295 69.5
SGA_v2.0_scaffold172G39001 Striga asiatica HOM05D004231 ORTHO05D004814 1.5e-95 353.6 295 67.1
SalBow7G0905 Salvia bowleyana HOM05D004231 ORTHO05D004814 2.5e-95 352.8 253 75.5
EL10Ac9g21537 Beta vulgaris HOM05D004231 ORTHO05D004814 3.3e-95 352.4 295 69.5
Sopen01g054320 Solanum pennellii HOM05D004231 ORTHO05D004814 3.3e-95 352.4 251 76.1
Medtr5g099180 Medicago truncatula HOM05D004231 ORTHO05D004814 7.4e-95 351.3 303 67.3
PSO782G1111 Papaver somniferum HOM05D004231 ORTHO05D004814 9.7e-95 350.9 287 69.0
Glyma.14G001000 Glycine max HOM05D004231 ORTHO05D004814 1.3e-94 350.5 252 77.0
ECA233G1094 Erigeron canadensis HOM05D004231 ORTHO05D004814 1.7e-94 350.1 281 70.5
Nn7g36283 Nelumbo nucifera HOM05D004231 ORTHO05D004814 2.2e-94 349.7 272 73.2
Phvul.008G292300 Phaseolus vulgaris HOM05D004231 ORTHO05D004814 2.2e-94 349.7 268 74.3
TPR.G5084 Trifolium pratense HOM05D004231 ORTHO05D004814 2.2e-94 349.7 285 68.8
Lsat_1_v5_gn_4_71321 Lactuca sativa HOM05D004231 ORTHO05D004814 2.8e-94 349.4 276 65.9
Nn2g15251 Nelumbo nucifera HOM05D004231 ORTHO05D004814 2.8e-94 349.4 298 69.8
PSO675G1855 Papaver somniferum HOM05D004231 ORTHO05D004814 2.8e-94 349.4 276 70.7
Aqoxy1G01703 Aquilegia oxysepala HOM05D004231 ORTHO05D004814 3.7e-94 349.0 301 65.8
PSO541G6356 Papaver somniferum HOM05D004231 ORTHO05D004814 4.8e-94 348.6 276 70.3
PSO063G5124 Papaver somniferum HOM05D004231 ORTHO05D004814 6.3e-94 348.2 287 68.6
TPR.G18636 Trifolium pratense HOM05D004231 ORTHO05D004814 6.3e-94 348.2 259 73.7
RhsimUnG0022900 Rhododendron simsii HOM05D004231 ORTHO05D004814 1.1e-93 347.4 299 66.6
ECA236G1252 Erigeron canadensis HOM05D000103 ORTHO05D000049 1.4e-93 347.1 269 71.0
PGSC0003DMG400014663 Solanum tuberosum HOM05D000109 ORTHO05D004814 1.8e-93 346.7 251 74.5
Psat2g000800 Pisum sativum HOM05D004231 ORTHO05D004814 3.4e-92 342.4 299 66.2
Cc11_g00240 Coffea canephora HOM05D004231 ORTHO05D004814 4.5e-92 342.0 302 66.6
MBI18_g17319_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 5.9e-92 341.7 300 66.0
AUR62013177 Chenopodium quinoa HOM05D004231 ORTHO05D004814 8.5e-91 337.8 302 66.2
unitig_0.g2083 Utricularia gibba HOM05D004231 ORTHO05D004814 8.5e-91 337.8 296 65.5
Gohir.A03G170800 Gossypium hirsutum HOM05D004231 ORTHO05D004814 1.4e-90 337.0 291 67.4
Gorai.005G216700 Gossypium raimondii HOM05D004231 ORTHO05D004814 7.2e-90 334.7 291 67.0
Gohir.D02G193900 Gossypium hirsutum HOM05D004231 ORTHO05D004814 1.2e-89 334.0 291 67.0
Psat2g000680 Pisum sativum HOM05D004231 ORTHO05D004814 1.8e-88 330.1 291 67.0
SHI25239 Sapria himalayana HOM05D004231 ORTHO05D004814 1.4e-85 320.5 295 62.7
ATR0177G062 Amborella trichopoda HOM05D004231 ORTHO05D004814 4.1e-85 318.9 262 68.7
HPP92_007738 Vanilla planifolia HOM05D004231 ORTHO05D004814 4.5e-84 315.5 289 64.0
Pp3c5_14900 Physcomitrium patens HOM05D004231 ORTHO05D004814 1.6e-81 307.0 270 63.7
Mapoly0173s0009 Marchantia polymorpha HOM05D004231 ORTHO05D004814 2.3e-80 303.1 277 61.4
AUR62010176 Chenopodium quinoa HOM05D004231 ORTHO05D004814 9.1e-77 291.2 302 56.3
SMO351G0181 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 5.0e-75 285.4 274 59.9
Os02g0831800 Oryza sativa ssp. japonica HOM05D004231 ORTHO05D004814 6.5e-75 285.0 282 59.6
GSVIVG01023624001 Vitis vinifera HOM05D004231 ORTHO05D004814 4.2e-74 282.3 293 60.1
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 3.6e-73 279.3 321 53.3
THA.LOC104807405 Tarenaya hassleriana HOM05D004231 ORTHO05D004814 3.0e-72 276.2 172 89.5
SEGI_38009 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 2.0e-71 273.5 242 59.5
MBI10_g41732_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 4.5e-68 262.3 238 58.4
Lj9P408T30 Lonicera japonica HOM05D004231 ORTHO05D004814 6.1e-65 251.9 172 82.0
Cre02.g082250 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 5.7e-63 245.4 268 53.4
MBI15_g18193_MAGBIO Magnolia biondii HOM05D004231 ORTHO05D004814 1.2e-57 227.6 263 52.9
ATR0810G109 Amborella trichopoda HOM05D004231 ORTHO05D004814 4.4e-55 219.2 185 68.1
COL.COLO4_34312 Corchorus olitorius HOM05D000109 ORTHO05D000520 1.4e-53 214.2 260 51.9
Atru.chr5.3561 Acer truncatum HOM05D004231 ORTHO05D004814 5.4e-53 212.2 131 81.7
Atru.chr5.3560 Acer truncatum HOM05D004231 ORTHO05D004814 2.7e-44 183.3 143 64.3
TAR625G1260 Trochodendron aralioides HOM05D004231 ORTHO05D004814 3.0e-43 179.9 129 70.5
Sabra09G0130700 Salix brachista HOM05D004231 ORTHO05D004814 1.2e-36 157.9 164 59.1
Cre02.g082200 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 1.3e-35 154.5 191 47.1
VMungo0331G0717 Vigna mungo HOM05D004231 ORTHO05D004814 3.4e-31 139.8 158 53.2
TAR625G0010 Trochodendron aralioides HOM05D004231 ORTHO05D004814 1.2e-28 131.3 89 71.9
VMungo0647G1050 Vigna mungo HOM05D004231 ORTHO05D004814 2.5e-26 123.6 95 68.4
BcaB08g34717 Brassica carinata HOM05D004231 ORTHO05D004814 5.6e-26 122.5 68 88.2
SMO231G0001 Selaginella moellendorffii HOM05D004231 ORTHO05D004814 2.4e-24 117.1 93 62.4
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 4.0e-24 116.3 116 50.0
arahy.Tifrunner.gnm1.ann1.H05BEB Arachis hypogaea HOM05D004231 ORTHO05D004814 2.2e-22 110.5 95 61.1
BcaB08g34718 Brassica carinata HOM05D004231 ORTHO05D004814 3.5e-20 103.2 56 91.1
Actinidia26328 Actinidia chinensis HOM05D004231 ORTHO05D004814 7.8e-20 102.1 116 49.1
QL06p003747 Quercus lobata HOM05D003236 ORTHO05D003620 1.0e-19 101.7 129 45.7
QL03p013131 Quercus lobata HOM05D004231 ORTHO05D004814 5.1e-19 99.4 79 62.0
QL08p042586 Quercus lobata HOM05D004231 ORTHO05D004814 2.8e-17 93.6 87 56.3
Dinv20762 Davidia involucrata HOM05D004231 ORTHO05D004814 1.6e-12 77.8 56 71.4
FAN07G1153 Fragaria x ananassa HOM05D004231 ORTHO05D004814 8.7e-11 72.0 49 69.4
FAN15G0284 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.5e-10 71.2 49 69.4
TAR625G0853 Trochodendron aralioides HOM05D000369 ORTHO05D000253 1.9e-10 70.9 177 35.6
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.9e-10 70.9 232 28.9
MCO14G367 Micromonas commoda HOM05D004231 ORTHO05D004814 3.3e-10 70.1 240 31.2
FAN05G5401 Fragaria x ananassa HOM05D004231 ORTHO05D004814 9.6e-10 68.6 50 66.0
SEGI_37911 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 1.6e-09 67.8 52 59.6
Cre02.g082150 Chlamydomonas reinhardtii HOM05D004231 ORTHO05D004814 4.8e-09 66.2 67 50.7
FAN05G3570 Fragaria x ananassa HOM05D004231 ORTHO05D004814 6.2e-09 65.9 49 65.3
PRCOL_00006973 Prasinoderma coloniale HOM05D004231 ORTHO05D004814 6.2e-09 65.9 242 29.3
FvH4_3g29830 Fragaria vesca HOM05D004126 ORTHO05D004818 1.8e-08 64.3 44 70.5
FAN25G3338 Fragaria x ananassa HOM05D004231 ORTHO05D004814 1.8e-08 64.3 50 62.0
FAN04G2646 Fragaria x ananassa HOM05D004231 ORTHO05D004814 2.6e-07 60.5 49 59.2
Ah.03g140200 Amaranthus hybridus HOM05D004231 ORTHO05D004814 2.9e-06 57.0 67 70.1
FAN23G0549 Fragaria x ananassa HOM05D004231 ORTHO05D004814 4.9e-06 56.2 80 50.0
FAN23G1162 Fragaria x ananassa HOM05D004231 ORTHO05D004814 4.9e-06 56.2 80 50.0


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