Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16445 Brassica carinata HOM05D003591 ORTHO05D096213 1.6e-74 282.7 144 100.0
BcaB07g33402 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-55 219.9 120 90.8
BcaB02g11544 Brassica carinata HOM05D003591 ORTHO05D005681 2.3e-54 215.7 120 88.3
BcaB01g01281 Brassica carinata HOM05D003591 ORTHO05D093295 3.4e-53 211.8 120 88.3
BcaB01g01113 Brassica carinata HOM05D003348 ORTHO05D010016 2.2e-52 209.1 120 86.7
BcaB05g24452 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-51 206.5 120 85.0
BcaB03g16334 Brassica carinata HOM05D003348 ORTHO05D010016 1.0e-49 200.3 120 81.7
BcaB08g35182 Brassica carinata HOM05D003591 ORTHO05D005681 2.3e-49 199.1 120 81.7
BcaB07g33061 Brassica carinata HOM05D003591 ORTHO05D005681 3.0e-49 198.7 120 85.8
BcaB07g33018 Brassica carinata HOM05D003591 ORTHO05D092282 5.2e-46 188.0 120 76.7
BcaB04g19404 Brassica carinata HOM05D003591 ORTHO05D009907 1.5e-45 186.4 119 78.2
BcaB07g33117 Brassica carinata HOM05D003591 ORTHO05D009907 1.4e-43 179.9 109 80.7
BcaB07g32279 Brassica carinata HOM05D003348 ORTHO05D010016 1.5e-40 169.9 120 74.2
BcaB04g18233 Brassica carinata HOM05D003591 ORTHO05D005681 1.9e-40 169.5 92 91.3
A09p31710 Brassica napus HOM05D003591 ORTHO05D005681 3.3e-40 168.7 121 73.6
BraA09t38302Z Brassica rapa HOM05D003591 ORTHO05D005681 9.5e-40 167.2 121 72.7
BcaB08g35627 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-39 166.8 120 69.2
C04p36620 Brassica napus HOM05D003591 ORTHO05D005681 1.6e-39 166.4 120 70.0
BolC4t25135H Brassica oleracea HOM05D003591 ORTHO05D005681 1.6e-39 166.4 120 70.0
BcaB08g35320 Brassica carinata HOM05D003591 ORTHO05D005681 2.1e-39 166.0 114 71.9
BcaB03g16209 Brassica carinata HOM05D003591 ORTHO05D005681 4.7e-39 164.9 120 65.8
A01p14520 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-39 164.5 125 69.6
A05p27760 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-39 164.5 125 69.6
A06p32970 Brassica napus HOM05D003591 ORTHO05D005681 6.2e-39 164.5 121 71.9
BraA02t07580Z Brassica rapa HOM05D003591 ORTHO05D005681 6.2e-39 164.5 121 71.9
BraA03t14847Z Brassica rapa HOM05D003591 ORTHO05D005681 6.2e-39 164.5 121 71.9
BraA06t26229Z Brassica rapa HOM05D003591 ORTHO05D005681 6.2e-39 164.5 121 71.9
BcaB05g24453 Brassica carinata HOM05D003591 ORTHO05D093807 8.1e-39 164.1 99 80.8
BraA05t21769Z Brassica rapa HOM05D003591 ORTHO05D005681 8.1e-39 164.1 121 71.9
BcaC06g34843 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-38 163.3 120 70.0
A06p23350 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-38 163.3 121 71.1
A07p03450 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-38 163.3 121 70.2
A08p10960 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-38 163.3 118 72.9
C02p32250 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-38 163.3 120 69.2
C05p33180 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-38 163.3 120 69.2
C05p35170 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-38 163.3 120 69.2
C07p31990 Brassica napus HOM05D003591 ORTHO05D005681 1.4e-38 163.3 120 69.2
BolC4t25466H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-38 163.3 120 69.2
BolC7t41596H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-38 163.3 120 70.0
BolC7t42807H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-38 163.3 120 70.0
BraA09t39581Z Brassica rapa HOM05D003591 ORTHO05D005681 1.8e-38 162.9 121 71.1
BraSC36t46030Z Brassica rapa HOM05D003591 ORTHO05D005681 1.8e-38 162.9 121 71.1
A06p27640 Brassica napus HOM05D003591 ORTHO05D005681 2.3e-38 162.5 118 72.0
C09p33370 Brassica napus HOM05D003591 ORTHO05D005681 2.3e-38 162.5 120 68.3
A01p28000 Brassica napus HOM05D003591 ORTHO05D005681 3.1e-38 162.2 121 71.1
C06p29690 Brassica napus HOM05D003591 ORTHO05D005681 3.1e-38 162.2 120 69.2
BolC5t32233H Brassica oleracea HOM05D003591 ORTHO05D005681 3.1e-38 162.2 120 69.2
C02p22600 Brassica napus HOM05D003591 ORTHO05D005681 4.0e-38 161.8 120 69.2
C02p28120 Brassica napus HOM05D003591 ORTHO05D005681 4.0e-38 161.8 120 69.2
BolC2t08856H Brassica oleracea HOM05D003591 ORTHO05D005681 4.0e-38 161.8 120 69.2
BolC2t09405H Brassica oleracea HOM05D003591 ORTHO05D005681 4.0e-38 161.8 120 68.3
C09p28690 Brassica napus HOM05D003591 ORTHO05D005681 5.2e-38 161.4 120 68.3
BolC5t32448H Brassica oleracea HOM05D003591 ORTHO05D005681 5.2e-38 161.4 120 68.3
C01p40950 Brassica napus HOM05D003591 ORTHO05D005681 6.8e-38 161.0 120 68.3
C04p36250 Brassica napus HOM05D003591 ORTHO05D005681 6.8e-38 161.0 120 68.3
BolC4t25162H Brassica oleracea HOM05D003591 ORTHO05D005681 6.8e-38 161.0 120 68.3
C04p15980 Brassica napus HOM05D003591 ORTHO05D005681 8.9e-38 160.6 120 67.5
A02p27490 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-37 160.2 121 70.2
C01p09530 Brassica napus HOM05D003591 ORTHO05D005681 1.2e-37 160.2 120 67.5
BolC1t02629H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-37 160.2 120 68.3
BolC2t09403H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-37 160.2 120 68.3
BolC3t15622H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-37 160.2 120 67.5
BolC4t23171H Brassica oleracea HOM05D003591 ORTHO05D005681 1.2e-37 160.2 120 67.5
BraA02t07777Z Brassica rapa HOM05D003591 ORTHO05D005681 1.2e-37 160.2 121 70.2
C02p09960 Brassica napus HOM05D003591 ORTHO05D005681 2.0e-37 159.5 120 68.3
C03p87750 Brassica napus HOM05D003591 ORTHO05D005681 2.0e-37 159.5 120 69.2
C04p20950 Brassica napus HOM05D003591 ORTHO05D005681 2.0e-37 159.5 120 67.5
C08p14230 Brassica napus HOM05D003591 ORTHO05D005681 2.0e-37 159.5 120 66.7
BolC9t57338H Brassica oleracea HOM05D003591 ORTHO05D005681 2.0e-37 159.5 120 67.5
BcaB06g27013 Brassica carinata HOM05D003591 ORTHO05D005681 2.6e-37 159.1 114 70.2
BolC2t08413H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-37 159.1 120 67.5
BolC3t20044H Brassica oleracea HOM05D003591 ORTHO05D005681 2.6e-37 159.1 120 68.3
BraA06t25603Z Brassica rapa HOM05D003591 ORTHO05D005681 2.6e-37 159.1 121 70.2
BcaB04g17486 Brassica carinata HOM05D003591 ORTHO05D005681 4.4e-37 158.3 114 69.3
C02p34170 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-37 158.3 120 67.5
BcaB06g27093 Brassica carinata HOM05D003591 ORTHO05D005681 5.8e-37 157.9 120 64.2
BcaC01g03288 Brassica carinata HOM05D003591 ORTHO05D005681 7.5e-37 157.5 120 68.3
C04p28010 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-36 156.4 120 67.5
BolC4t24345H Brassica oleracea HOM05D003591 ORTHO05D005681 1.7e-36 156.4 120 67.5
BolC4t27380H Brassica oleracea HOM05D003591 ORTHO05D005681 1.7e-36 156.4 120 67.5
BcaB02g10642 Brassica carinata HOM05D003591 ORTHO05D005681 2.9e-36 155.6 120 65.0
BcaB04g17828 Brassica carinata HOM05D003591 ORTHO05D005681 2.9e-36 155.6 117 66.7
BcaB01g01038 Brassica carinata HOM05D003591 ORTHO05D005681 6.4e-36 154.5 113 69.9
BcaB04g17785 Brassica carinata HOM05D003591 ORTHO05D094524 6.4e-36 154.5 117 69.2
C09p13180 Brassica napus HOM05D003591 ORTHO05D005681 6.4e-36 154.5 120 67.5
BolC9t54212H Brassica oleracea HOM05D003591 ORTHO05D005681 6.4e-36 154.5 120 67.5
BcaB04g17038 Brassica carinata HOM05D003591 ORTHO05D005681 8.3e-36 154.1 114 67.5
BcaB07g33918 Brassica carinata HOM05D003591 ORTHO05D005681 1.4e-35 153.3 114 66.7
BolC9t56172H Brassica oleracea HOM05D003591 ORTHO05D005681 1.4e-35 153.3 114 68.4
A01p27630 Brassica napus HOM05D003591 ORTHO05D015527 1.9e-35 152.9 113 69.0
BraA09t37347Z Brassica rapa HOM05D003591 ORTHO05D005681 3.2e-35 152.1 121 69.4
A01p26630 Brassica napus HOM05D003591 ORTHO05D015527 5.4e-35 151.4 113 68.1
BolC6t37339H Brassica oleracea HOM05D003591 ORTHO05D005681 5.4e-35 151.4 114 67.5
C07p25810 Brassica napus HOM05D003591 ORTHO05D005681 7.1e-35 151.0 120 65.8
A03p68610 Brassica napus HOM05D003591 ORTHO05D015527 1.2e-34 150.2 113 67.3
A09p31670 Brassica napus HOM05D003591 ORTHO05D015527 1.2e-34 150.2 113 67.3
A10p07270 Brassica napus HOM05D003591 ORTHO05D015527 1.2e-34 150.2 113 67.3
A05p29690 Brassica napus HOM05D003591 ORTHO05D015527 1.6e-34 149.8 113 67.3
A05p29440 Brassica napus HOM05D003591 ORTHO05D015527 2.7e-34 149.1 113 66.4
A03p66450 Brassica napus HOM05D003591 ORTHO05D015527 3.5e-34 148.7 113 66.4
A05p29680 Brassica napus HOM05D003591 ORTHO05D015527 3.5e-34 148.7 113 66.4
BcaB01g01500 Brassica carinata HOM05D003591 ORTHO05D005681 4.6e-34 148.3 108 69.4
BcaC05g27725 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-33 146.7 129 60.5
C05p37070 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-33 146.4 114 65.8
BcaB07g33054 Brassica carinata HOM05D003591 ORTHO05D005681 5.1e-33 144.8 114 61.4
BcaC06g34164 Brassica carinata HOM05D003591 ORTHO05D005681 2.5e-32 142.5 108 66.7
BcaC06g35756 Brassica carinata HOM05D003591 ORTHO05D090311 2.5e-32 142.5 108 67.6
C02p51040 Brassica napus HOM05D003591 ORTHO05D005681 2.5e-32 142.5 107 67.3
BcaC02g09819 Brassica carinata HOM05D003591 ORTHO05D005681 4.3e-32 141.7 108 66.7
BcaC02g09149 Brassica carinata HOM05D003591 ORTHO05D005681 5.6e-32 141.4 108 66.7
BcaC03g15229 Brassica carinata HOM05D003591 ORTHO05D003049 5.6e-32 141.4 108 66.7
BcaC02g10879 Brassica carinata HOM05D003591 ORTHO05D092259 9.5e-32 140.6 107 66.4
BcaB03g16169 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-31 140.2 114 60.5
BcaB04g17866 Brassica carinata HOM05D003591 ORTHO05D094092 1.2e-31 140.2 108 64.8
BcaC02g11382 Brassica carinata HOM05D003591 ORTHO05D005681 1.2e-31 140.2 108 65.7
BcaB04g17010 Brassica carinata HOM05D003591 ORTHO05D005681 1.6e-31 139.8 120 58.3
BcaC04g20349 Brassica carinata HOM05D003591 ORTHO05D005681 3.6e-31 138.7 107 65.4
BcaB05g23044 Brassica carinata HOM05D003591 ORTHO05D005681 8.1e-31 137.5 95 71.6
BcaB06g26643 Brassica carinata HOM05D003348 ORTHO05D010016 1.4e-30 136.7 104 74.0
BolC5t33482H Brassica oleracea HOM05D003591 ORTHO05D005681 4.0e-30 135.2 104 67.3
BraA09t40594Z Brassica rapa HOM05D003591 ORTHO05D005681 5.2e-30 134.8 100 70.0
BraA09t37386Z Brassica rapa HOM05D003591 ORTHO05D005681 8.9e-30 134.0 99 69.7
BcaB03g16256 Brassica carinata HOM05D003591 ORTHO05D005681 2.6e-29 132.5 120 57.5
C07p21330 Brassica napus HOM05D003591 ORTHO05D005681 4.4e-29 131.7 105 65.7
C07p11480 Brassica napus HOM05D003591 ORTHO05D005681 9.9e-29 130.6 99 68.7
A01p33180 Brassica napus HOM05D003591 ORTHO05D005681 2.9e-28 129.0 121 61.2
A03p57820 Brassica napus HOM05D003591 ORTHO05D005681 4.9e-28 128.3 121 61.2
BcaB06g26933 Brassica carinata HOM05D003591 ORTHO05D005681 1.1e-27 127.1 97 64.9
BcaC09g49519 Brassica carinata HOM05D003591 ORTHO05D005681 2.4e-27 125.9 104 64.4
BolC6t38533H Brassica oleracea HOM05D003591 ORTHO05D005681 2.4e-27 125.9 88 71.6
C04p40830 Brassica napus HOM05D003591 ORTHO05D005681 4.1e-27 125.2 99 65.7
BraA06t23871Z Brassica rapa HOM05D003591 ORTHO05D005681 9.2e-27 124.0 93 72.0
BolC8t47808H Brassica oleracea HOM05D003591 ORTHO05D005681 2.1e-26 122.9 88 71.6
BolC4t25666H Brassica oleracea HOM05D003591 ORTHO05D005681 2.7e-26 122.5 88 70.5
BcaC07g37492 Brassica carinata HOM05D003591 ORTHO05D005681 4.6e-26 121.7 88 71.6
BcaB04g18052 Brassica carinata HOM05D003591 ORTHO05D023905 7.8e-26 120.9 91 67.0
A06p20300 Brassica napus HOM05D003591 ORTHO05D005681 1.0e-25 120.6 94 72.3
A08p14820 Brassica napus HOM05D003591 ORTHO05D005681 1.7e-25 119.8 121 56.2
BcaC02g09280 Brassica carinata HOM05D003591 ORTHO05D093581 2.3e-25 119.4 105 59.0
C09p39080 Brassica napus HOM05D003591 ORTHO05D005681 3.0e-25 119.0 120 56.7
C09p26480 Brassica napus HOM05D003591 ORTHO05D005681 6.6e-25 117.9 120 55.8
A07p05580 Brassica napus HOM05D003591 ORTHO05D005681 3.3e-24 115.5 121 57.0
BcaC02g10516 Brassica carinata HOM05D006890 ORTHO05D009907 2.1e-23 112.8 94 63.8
BcaB04g17398 Brassica carinata HOM05D003591 ORTHO05D091303 2.8e-23 112.5 82 68.3
C09p43990 Brassica napus HOM05D003591 ORTHO05D005681 3.6e-23 112.1 120 51.7
BcaB05g24917 Brassica carinata HOM05D003591 ORTHO05D005681 1.8e-22 109.8 82 68.3
A03p63750 Brassica napus HOM05D003591 ORTHO05D103373 1.8e-22 109.8 81 70.4
A09p29800 Brassica napus HOM05D003591 ORTHO05D099288 1.8e-22 109.8 81 70.4
A07p22590 Brassica napus HOM05D003591 ORTHO05D099096 6.9e-22 107.8 95 61.1
BcaB04g18191 Brassica carinata HOM05D003591 ORTHO05D023905 7.6e-21 104.4 80 63.8
BcaB06g26777 Brassica carinata HOM05D003591 ORTHO05D023905 9.9e-21 104.0 88 59.1
BcaC03g14809 Brassica carinata HOM05D003591 ORTHO05D005681 1.3e-20 103.6 86 61.6
C02p44880 Brassica napus HOM05D003591 ORTHO05D005681 3.8e-20 102.1 67 74.6
BcaB05g23446 Brassica carinata HOM05D003591 ORTHO05D023905 3.2e-19 99.0 81 60.5
C01p26850 Brassica napus HOM05D003591 ORTHO05D014029 3.2e-19 99.0 120 49.2
BcaB04g18787 Brassica carinata HOM05D003591 ORTHO05D095528 7.8e-18 94.4 69 68.1
A05p23340 Brassica napus HOM05D003591 ORTHO05D015527 1.7e-17 93.2 92 56.5
BolC8t50331H Brassica oleracea HOM05D003591 ORTHO05D005681 3.9e-17 92.0 59 72.9
A05p23640 Brassica napus HOM05D003591 ORTHO05D005681 5.1e-17 91.7 62 72.6
BraA05t21231Z Brassica rapa HOM05D003591 ORTHO05D005681 5.1e-17 91.7 62 72.6
A05p31230 Brassica napus HOM05D003591 ORTHO05D100173 6.6e-17 91.3 93 59.1
C04p57200 Brassica napus HOM05D003591 ORTHO05D005681 1.9e-16 89.7 103 51.5
C07p26060 Brassica napus HOM05D003591 ORTHO05D014535 2.5e-16 89.4 75 61.3
BcaB03g16456 Brassica carinata HOM05D003591 ORTHO05D005681 3.3e-16 89.0 75 57.3
BcaB07g33924 Brassica carinata HOM05D006890 ORTHO05D009907 3.3e-16 89.0 86 58.1
BcaB07g32445 Brassica carinata HOM05D003591 ORTHO05D023905 8.1e-15 84.3 57 70.2
BcaC03g14967 Brassica carinata HOM05D003591 ORTHO05D005681 6.9e-14 81.3 114 45.6
BolC7t43136H Brassica oleracea HOM05D003591 ORTHO05D042843 9.0e-14 80.9 46 82.6
BcaC03g15680 Brassica carinata HOM05D003591 ORTHO05D031965 2.9e-12 75.9 67 59.7
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 1.1e-11 73.9 118 39.8
BcaB07g33141 Brassica carinata HOM05D013390 ORTHO05D092746 4.2e-11 72.0 45 75.6
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 4.2e-11 72.0 118 39.0
A09p40910 Brassica napus HOM05D003591 ORTHO05D099409 9.3e-11 70.9 62 62.9
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 1.2e-10 70.5 118 38.1
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 3.5e-10 68.9 118 38.1
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 3.5e-10 68.9 118 38.1
C04p51490 Brassica napus HOM05D003591 ORTHO05D042843 4.6e-10 68.6 40 82.5
BcaB04g17638 Brassica carinata HOM05D003591 ORTHO05D005681 7.9e-10 67.8 120 36.7
BraA02t07832Z Brassica rapa HOM05D000353 ORTHO05D027349 7.9e-10 67.8 111 35.1
BcaC02g09786 Brassica carinata HOM05D003591 ORTHO05D094424 2.3e-09 66.2 54 61.1
BcaB01g01390 Brassica carinata HOM05D001499 ORTHO05D001560 3.9e-09 65.5 44 68.2
BNapus_Darmor_BZH_scaffold_103p00030 Brassica napus HOM05D003591 ORTHO05D015462 3.9e-09 65.5 47 68.1
BNapus_Darmor_BZH_scaffold_104p00030 Brassica napus HOM05D003591 ORTHO05D015462 3.9e-09 65.5 47 68.1
BraSC36t46101Z Brassica rapa HOM05D003591 ORTHO05D015462 3.9e-09 65.5 47 68.1
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 5.1e-09 65.1 118 37.3
C04p13460 Brassica napus HOM05D003591 ORTHO05D015462 5.1e-09 65.1 47 68.1
BcaC09g50299 Brassica carinata HOM05D003591 ORTHO05D005681 8.7e-09 64.3 49 65.3
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 1.1e-08 63.9 109 38.5
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 1.1e-08 63.9 109 38.5
BraA03t15698Z Brassica rapa HOM05D003591 ORTHO05D015462 2.5e-08 62.8 47 66.0
BraA09t38695Z Brassica rapa HOM05D003591 ORTHO05D015462 2.5e-08 62.8 47 66.0
BcaC08g43066 Brassica carinata HOM05D000353 ORTHO05D027041 7.4e-08 61.2 117 37.6
A03p67750 Brassica napus HOM05D003591 ORTHO05D015462 7.4e-08 61.2 47 63.8
BraA07t28411Z Brassica rapa HOM05D003591 ORTHO05D015462 7.4e-08 61.2 47 63.8
BraSC36t46093Z Brassica rapa HOM05D003591 ORTHO05D015527 7.4e-08 61.2 46 65.2
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 2.1e-07 59.7 107 36.4
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 2.1e-07 59.7 109 36.7
BcaNung06545 Brassica carinata HOM05D003591 ORTHO05D005681 4.8e-07 58.5 84 41.7
BcaC09g48473 Brassica carinata HOM05D003591 ORTHO05D092369 8.1e-07 57.8 75 44.0
BraA05t21653Z Brassica rapa HOM05D003591 ORTHO05D107715 1.4e-06 57.0 45 60.0
BraA05t21545Z Brassica rapa HOM05D003591 ORTHO05D107559 5.3e-06 55.1 37 73.0


User provided reference genes

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