Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16438 Brassica carinata HOM05D000353 ORTHO05D013242 3.6e-52 208.0 107 100.0
BcaB01g01136 Brassica carinata HOM05D000353 ORTHO05D013242 1.7e-38 162.5 96 88.5
BcaB01g01538 Brassica carinata HOM05D011453 ORTHO05D014511 1.6e-36 156.0 93 87.1
BcaB05g23079 Brassica carinata HOM05D000353 ORTHO05D013242 2.7e-31 138.7 81 90.1
BcaNung05687 Brassica carinata HOM05D000353 ORTHO05D013242 2.5e-29 132.1 79 86.1
BcaB04g18091 Brassica carinata HOM05D000353 ORTHO05D013242 4.0e-27 124.8 78 82.1
BcaB06g26938 Brassica carinata HOM05D000353 ORTHO05D013242 4.0e-27 124.8 78 87.2
BcaB05g23573 Brassica carinata HOM05D000589 ORTHO05D013242 7.6e-26 120.6 69 88.4
BcaB02g11474 Brassica carinata HOM05D000589 ORTHO05D013242 2.4e-24 115.5 69 87.0
C09p21140 Brassica napus HOM05D000353 ORTHO05D013242 5.4e-24 114.4 101 60.4
BcaB06g26120 Brassica carinata HOM05D000353 ORTHO05D013242 1.6e-23 112.8 74 77.0
BolC9t55015H Brassica oleracea HOM05D000353 ORTHO05D013242 2.1e-23 112.5 101 59.4
BcaB08g35927 Brassica carinata HOM05D025466 ORTHO05D013242 6.2e-20 100.9 59 88.1
BolC8t48493H Brassica oleracea HOM05D000353 ORTHO05D011975 7.1e-16 87.4 94 46.8
C05p35890 Brassica napus HOM05D000353 ORTHO05D011975 1.2e-15 86.7 94 46.8
C09p23340 Brassica napus HOM05D000353 ORTHO05D011975 1.2e-15 86.7 94 46.8
BolC5t34016H Brassica oleracea HOM05D000353 ORTHO05D011975 1.2e-15 86.7 94 46.8
C05p53380 Brassica napus HOM05D000353 ORTHO05D011975 1.6e-15 86.3 94 46.8
A02p28650 Brassica napus HOM05D000353 ORTHO05D011975 2.1e-15 85.9 94 46.8
BolC5t34008H Brassica oleracea HOM05D000353 ORTHO05D011975 2.1e-15 85.9 94 45.7
BraA02t07900Z Brassica rapa HOM05D000353 ORTHO05D011975 2.1e-15 85.9 94 46.8
A01p27050 Brassica napus HOM05D000353 ORTHO05D011975 3.5e-15 85.1 94 46.8
C09p64190 Brassica napus HOM05D000353 ORTHO05D011975 3.5e-15 85.1 91 48.4
BolC9t59256H Brassica oleracea HOM05D000353 ORTHO05D011975 3.5e-15 85.1 91 48.4
BraA01t02839Z Brassica rapa HOM05D000353 ORTHO05D011975 3.5e-15 85.1 94 46.8
C07p19100 Brassica napus HOM05D000353 ORTHO05D012074 4.6e-15 84.7 94 44.7
BcaC06g36012 Brassica carinata HOM05D000353 ORTHO05D012074 6.0e-15 84.3 94 43.6
BolC5t32307H Brassica oleracea HOM05D000353 ORTHO05D012074 6.0e-15 84.3 91 45.1
BolC5t34001H Brassica oleracea HOM05D000353 ORTHO05D012074 6.0e-15 84.3 91 45.1
BcaC06g33696 Brassica carinata HOM05D000353 ORTHO05D012074 7.9e-15 84.0 94 44.7
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 1.0e-14 83.6 94 43.6
C02p27620 Brassica napus HOM05D000353 ORTHO05D005681 1.0e-14 83.6 93 46.2
BcaB01g02433 Brassica carinata HOM05D005426 ORTHO05D012988 1.3e-14 83.2 57 75.4
BolC2t09049H Brassica oleracea HOM05D000353 ORTHO05D012074 1.3e-14 83.2 91 44.0
BolC5t31839H Brassica oleracea HOM05D000353 ORTHO05D011975 1.3e-14 83.2 94 45.7
BcaC06g35171 Brassica carinata HOM05D000353 ORTHO05D012074 1.8e-14 82.8 94 43.6
A01p27040 Brassica napus HOM05D000353 ORTHO05D012074 1.8e-14 82.8 94 44.7
A05p21300 Brassica napus HOM05D000353 ORTHO05D012074 1.8e-14 82.8 94 43.6
BolC7t42421H Brassica oleracea HOM05D000353 ORTHO05D012074 1.8e-14 82.8 94 43.6
BraA01t02838Z Brassica rapa HOM05D000353 ORTHO05D012074 1.8e-14 82.8 94 44.7
BraA05t21038Z Brassica rapa HOM05D000353 ORTHO05D012074 1.8e-14 82.8 94 43.6
C02p47690 Brassica napus HOM05D000353 ORTHO05D011975 2.3e-14 82.4 94 44.7
BolC2t10806H Brassica oleracea HOM05D000353 ORTHO05D011975 2.3e-14 82.4 94 44.7
BolC4t26685H Brassica oleracea HOM05D000353 ORTHO05D012074 2.3e-14 82.4 91 44.0
BolC8t48492H Brassica oleracea HOM05D000353 ORTHO05D012074 2.3e-14 82.4 90 44.4
BolC9t57769H Brassica oleracea HOM05D000353 ORTHO05D011975 2.3e-14 82.4 94 45.7
A02p28660 Brassica napus HOM05D000353 ORTHO05D012074 3.9e-14 81.6 91 44.0
BolC5t34015H Brassica oleracea HOM05D000353 ORTHO05D012074 3.9e-14 81.6 91 44.0
BraA02t07901Z Brassica rapa HOM05D000353 ORTHO05D012074 3.9e-14 81.6 91 44.0
C02p47700 Brassica napus HOM05D000353 ORTHO05D012074 6.7e-14 80.9 91 44.0
BcaB06g26826 Brassica carinata HOM05D000589 ORTHO05D013242 8.7e-14 80.5 46 89.1
BcaC03g15183 Brassica carinata HOM05D000353 ORTHO05D000174 8.7e-14 80.5 94 41.5
BcaC04g22103 Brassica carinata HOM05D000353 ORTHO05D012074 8.7e-14 80.5 94 41.5
C02p27630 Brassica napus HOM05D000353 ORTHO05D012074 8.7e-14 80.5 91 42.9
BolC8t47318H Brassica oleracea HOM05D000353 ORTHO05D011975 1.5e-13 79.7 94 45.7
C02p27140 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-13 79.0 86 47.7
C09p23330 Brassica napus HOM05D000353 ORTHO05D012074 2.5e-13 79.0 91 41.8
BolC9t55251H Brassica oleracea HOM05D000353 ORTHO05D012074 2.5e-13 79.0 91 41.8
BcaC07g37502 Brassica carinata HOM05D000353 ORTHO05D039805 9.6e-13 77.0 97 44.3
BolC8t47825H Brassica oleracea HOM05D000353 ORTHO05D039805 9.6e-13 77.0 97 44.3
BolC9t57768H Brassica oleracea HOM05D000353 ORTHO05D012074 9.6e-13 77.0 88 43.2
BcaC05g27602 Brassica carinata HOM05D000353 ORTHO05D012074 1.3e-12 76.6 87 42.5
C05p35880 Brassica napus HOM05D000353 ORTHO05D005681 1.3e-12 76.6 87 42.5
BolC5t32503H Brassica oleracea HOM05D000353 ORTHO05D042563 3.7e-12 75.1 73 52.1
BcaB04g17266 Brassica carinata HOM05D000353 ORTHO05D005681 4.8e-12 74.7 91 40.7
BcaB04g18044 Brassica carinata HOM05D000353 ORTHO05D005681 4.8e-12 74.7 91 40.7
BcaB06g26774 Brassica carinata HOM05D000353 ORTHO05D092330 4.8e-12 74.7 46 84.8
BcaB03g15977 Brassica carinata HOM05D000353 ORTHO05D005681 6.2e-12 74.3 91 40.7
BcaB03g16214 Brassica carinata HOM05D000353 ORTHO05D005681 6.2e-12 74.3 96 43.8
A07p09370 Brassica napus HOM05D025466 ORTHO05D013242 6.2e-12 74.3 72 58.3
BraA07t28733Z Brassica rapa HOM05D025466 ORTHO05D013242 6.2e-12 74.3 72 58.3
BcaB07g32709 Brassica carinata HOM05D000353 ORTHO05D005681 8.2e-12 73.9 84 41.7
BcaB08g34856 Brassica carinata HOM05D000353 ORTHO05D005681 8.2e-12 73.9 91 40.7
C05p37620 Brassica napus HOM05D000353 ORTHO05D042563 1.1e-11 73.6 73 50.7
BcaB01g01095 Brassica carinata HOM05D000353 ORTHO05D005681 1.8e-11 72.8 84 42.9
C05p37600 Brassica napus HOM05D000353 ORTHO05D040703 1.8e-11 72.8 60 60.0
BcaB02g10509 Brassica carinata HOM05D000353 ORTHO05D005681 2.4e-11 72.4 91 41.8
BcaB08g34640 Brassica carinata HOM05D000353 ORTHO05D005681 2.4e-11 72.4 91 39.6
C02p27150 Brassica napus HOM05D000353 ORTHO05D012074 3.1e-11 72.0 84 42.9
C09p49190 Brassica napus HOM05D000353 ORTHO05D005681 9.0e-11 70.5 92 39.1
BolC5t32499H Brassica oleracea HOM05D000353 ORTHO05D040703 2.0e-10 69.3 52 65.4
BcaB01g00780 Brassica carinata HOM05D000353 ORTHO05D011975 2.6e-10 68.9 98 40.8
C09p64180 Brassica napus HOM05D000353 ORTHO05D039625 2.6e-10 68.9 74 45.9
C02p55690 Brassica napus HOM05D000353 ORTHO05D005681 3.4e-10 68.6 102 38.2
BcaB02g11477 Brassica carinata HOM05D000353 ORTHO05D005681 4.5e-10 68.2 94 37.2
BcaB06g27200 Brassica carinata HOM05D000353 ORTHO05D005681 1.0e-09 67.0 94 37.2
BcaB04g18092 Brassica carinata HOM05D000353 ORTHO05D013242 1.3e-09 66.6 70 55.7
BcaB08g35178 Brassica carinata HOM05D000353 ORTHO05D032815 1.7e-09 66.2 77 45.5
C03p63080 Brassica napus HOM05D000353 ORTHO05D005681 1.7e-09 66.2 85 40.0
BolC5t32308H Brassica oleracea HOM05D000353 ORTHO05D011975 2.9e-09 65.5 60 48.3
BcaB01g00737 Brassica carinata HOM05D009963 ORTHO05D013780 8.4e-09 63.9 34 91.2
BcaC05g29110 Brassica carinata HOM05D000353 ORTHO05D039625 8.4e-09 63.9 77 44.2
C05p53350 Brassica napus HOM05D000353 ORTHO05D005681 3.2e-08 62.0 77 42.9
BcaC01g04869 Brassica carinata HOM05D000353 ORTHO05D027041 4.2e-08 61.6 93 38.7
BolC5t32374H Brassica oleracea HOM05D000353 ORTHO05D000174 1.2e-07 60.1 63 49.2
BcaB08g35405 Brassica carinata HOM05D000353 ORTHO05D023971 1.6e-07 59.7 96 33.3
BcaB05g24102 Brassica carinata HOM05D000353 ORTHO05D005681 2.1e-07 59.3 97 35.1
C03p63090 Brassica napus HOM05D000353 ORTHO05D011975 2.1e-07 59.3 69 46.4
BolC7t41941H Brassica oleracea HOM05D025466 ORTHO05D013242 2.1e-07 59.3 62 54.8
C07p14430 Brassica napus HOM05D025466 ORTHO05D013242 3.5e-07 58.5 62 54.8
C03p32830 Brassica napus HOM05D000353 ORTHO05D027041 6.0e-07 57.8 93 38.7
BolC3t15617H Brassica oleracea HOM05D000353 ORTHO05D027041 6.0e-07 57.8 93 38.7
BolC6t35166H Brassica oleracea HOM05D000353 ORTHO05D032815 6.0e-07 57.8 53 49.1
BcaB05g22042 Brassica carinata HOM05D000353 ORTHO05D000199 1.0e-06 57.0 91 41.8
C06p00360 Brassica napus HOM05D000353 ORTHO05D032815 1.0e-06 57.0 53 49.1
C09p17510 Brassica napus HOM05D000353 ORTHO05D011975 1.8e-06 56.2 69 44.9
BcaB03g16076 Brassica carinata HOM05D000353 ORTHO05D005681 8.7e-06 53.9 85 34.1


User provided reference genes

Program Settings