Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 9.0e-122 440.3 222 100.0
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-52 210.3 170 64.7
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-52 208.8 170 65.3
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-50 203.0 170 62.9
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-48 196.4 170 62.9
BraA05t21178Z Brassica rapa HOM05D003835 ORTHO05D004930 2.3e-45 186.4 170 63.5
BcaC01g02049 Brassica carinata HOM05D003835 ORTHO05D004930 6.8e-45 184.9 169 62.1
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-44 184.1 118 76.3
BraA08t32788Z Brassica rapa HOM05D003835 ORTHO05D004930 5.8e-36 155.2 116 71.6
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 7.5e-36 154.8 212 45.8
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 4.9e-35 152.1 170 52.9
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 7.8e-33 144.8 121 60.3
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-32 142.5 106 66.0
BcaC09g49877 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-30 137.5 156 51.3
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 2.8e-30 136.3 139 55.4
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-29 133.7 139 53.2
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 4.0e-29 132.5 165 48.5
BolC8t47803H Brassica oleracea HOM05D003835 ORTHO05D004930 6.4e-27 125.2 143 51.7
BolC9t56675H Brassica oleracea HOM05D003835 ORTHO05D004930 1.6e-25 120.6 127 55.9
BcaC09g50045 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-23 114.0 171 46.2
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-23 113.6 171 45.6
BcaC03g17352 Brassica carinata HOM05D003835 ORTHO05D004930 4.3e-23 112.5 130 50.8
BcaC09g49628 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-22 108.6 125 49.6
BcaC08g42800 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-20 102.1 82 64.6
BcaC06g35835 Brassica carinata HOM05D003835 ORTHO05D004930 7.6e-20 101.7 117 49.6
BcaB04g18230 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-16 89.7 144 41.7
BcaC06g35919 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-16 89.7 171 41.5
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 6.6e-16 88.6 152 36.2
BcaB08g35438 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-15 87.4 144 42.4
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 4.3e-15 85.9 94 45.7
BolC6t37001H Brassica oleracea HOM05D003835 ORTHO05D004930 3.6e-14 82.8 85 50.6
BolC5t32563H Brassica oleracea HOM05D003835 ORTHO05D004930 4.8e-14 82.4 107 48.6
BcaC04g20885 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-13 80.5 147 38.8
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-13 80.5 160 36.2
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-12 77.0 108 39.8
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 2.0e-12 77.0 93 44.1
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-12 75.9 160 34.4
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-12 75.9 93 44.1
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-12 75.9 100 42.0
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-12 75.5 102 43.1
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-12 75.5 100 43.0
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 7.6e-12 75.1 102 42.2
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-11 73.2 88 44.3
BcaC01g02254 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-11 72.8 107 45.8
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-11 72.4 102 40.2
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-11 72.4 160 34.4
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 4.9e-11 72.4 102 39.2
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 8.4e-11 71.6 88 44.3
BcaB03g16212 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-10 71.2 144 37.5
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 1.1e-10 71.2 84 42.9
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 1.1e-10 71.2 101 35.6
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-10 69.7 83 45.8
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-10 69.3 101 36.6
BcaC03g16200 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-09 67.8 57 63.2
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-09 67.4 160 34.4
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 1.6e-09 67.4 68 51.5
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-09 67.0 102 37.3
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-09 66.2 99 37.4
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-09 65.9 79 44.3
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-09 65.5 160 33.8
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 6.0e-09 65.5 159 32.7
BraA04t16848Z Brassica rapa HOM05D003835 ORTHO05D004930 6.0e-09 65.5 73 47.9
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 7.9e-09 65.1 162 31.5
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 7.9e-09 65.1 77 46.8
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-08 64.3 157 29.9
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 3.0e-08 63.2 160 33.8
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 3.9e-08 62.8 82 41.5
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-08 62.8 116 35.3
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 6.7e-08 62.0 160 32.5
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 6.7e-08 62.0 86 37.2
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 8.7e-08 61.6 75 44.0
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-07 61.2 87 40.2
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-07 61.2 160 30.6
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 5.6e-07 58.9 153 31.4
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 7.4e-07 58.5 76 40.8
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-07 58.2 72 41.7
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-07 58.2 59 49.2
BcaB07g33499 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-06 57.0 99 39.4


User provided reference genes

Program Settings