Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 8.8e-274 946.4 504 100.0
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 3.7e-240 834.7 501 90.4
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 1.0e-237 826.6 511 88.6
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 1.0e-237 826.6 511 88.6
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 1.1e-236 823.2 518 88.2
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 1.2e-235 819.7 508 87.6
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 4.6e-222 774.6 512 84.6
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 4.6e-222 774.6 512 84.6
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 3.6e-219 765.0 511 82.4
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 3.6e-219 765.0 514 82.5
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 1.8e-218 762.7 532 81.4
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 6.8e-218 760.8 538 80.3
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 8.9e-218 760.4 506 83.0
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 1.1e-212 743.4 511 80.2
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 1.5e-209 733.0 513 80.5
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 1.4e-207 726.5 509 78.4
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 9.2e-207 723.8 522 79.3
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 3.5e-206 721.8 526 78.5
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 1.8e-194 682.9 377 93.9
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 1.1e-170 604.0 509 68.8
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 3.1e-170 602.4 465 71.6
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 7.7e-153 544.7 528 61.4
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 7.9e-150 534.6 520 60.6
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 1.0e-149 534.3 516 60.5
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 4.4e-148 528.9 492 62.2
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 5.7e-148 528.5 472 65.0
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 9.7e-148 527.7 525 60.0
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 9.7e-148 527.7 481 62.2
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.3e-147 527.3 532 59.8
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 3.7e-147 525.8 481 62.0
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 2.4e-146 523.1 494 62.8
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 4.1e-146 522.3 500 61.6
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 4.5e-145 518.8 470 64.0
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 1.3e-144 517.3 497 61.8
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 2.9e-144 516.2 522 58.8
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 8.5e-144 514.6 486 60.3
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 1.2e-142 510.8 523 59.1
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 1.6e-142 510.4 525 56.8
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 3.6e-142 509.2 524 57.3
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.4e-141 507.3 517 58.2
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.8e-141 506.9 517 58.2
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 2.3e-141 506.5 521 57.6
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 4.4e-140 502.3 525 58.5
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 4.4e-140 502.3 498 59.2
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 7.5e-140 501.5 515 58.6
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 2.2e-139 500.0 525 58.3
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 4.8e-139 498.8 511 59.3
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 4.8e-139 498.8 517 58.6
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 2.4e-138 496.5 526 55.9
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 4.1e-138 495.7 503 58.4
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 1.6e-137 493.8 461 61.0
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 5.9e-137 491.9 514 57.2
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 1.0e-136 491.1 502 56.8
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 2.9e-136 489.6 498 56.4
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 8.5e-136 488.0 453 61.4
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 1.9e-135 486.9 460 59.8
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 1.9e-135 486.9 520 57.3
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 7.2e-135 485.0 519 54.5
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 1.4e-133 480.7 612 51.6
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 5.2e-133 478.8 503 56.3
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 6.8e-133 478.4 512 55.1
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.5e-132 477.2 478 59.0
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 4.4e-132 475.7 513 54.8
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 5.7e-132 475.3 413 63.7
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 1.3e-131 474.2 505 56.4
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 2.8e-131 473.0 510 54.5
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 3.7e-131 472.6 507 56.8
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 6.3e-131 471.9 524 55.3
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 2.4e-130 469.9 531 53.1
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 7.0e-130 468.4 405 61.2
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 7.0e-130 468.4 473 57.3
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.2e-129 467.6 537 52.7
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 2.0e-129 466.8 533 53.8
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 1.0e-128 464.5 507 56.6
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 3.8e-128 462.6 522 53.6
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.9e-127 460.3 487 54.4
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 3.2e-127 459.5 432 61.1
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 1.2e-126 457.6 510 54.5
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 6.1e-126 455.3 414 59.7
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 1.0e-125 454.5 516 52.9
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 9.8e-124 448.0 473 54.5
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 1.3e-123 447.6 502 52.8
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 1.7e-123 447.2 521 51.8
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 6.3e-123 445.3 413 59.8
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.1e-122 444.5 474 54.9
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.4e-122 444.1 448 58.5
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 1.8e-122 443.7 522 52.3
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 2.4e-122 443.4 513 51.5
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 5.4e-122 442.2 392 60.2
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.2e-121 441.0 410 60.2
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 7.8e-121 438.3 410 60.0
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 2.9e-120 436.4 469 55.9
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 3.8e-120 436.0 515 51.8
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 2.5e-119 433.3 386 59.6
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 1.6e-118 430.6 478 51.9
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 8.0e-118 428.3 400 58.0
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 4.0e-117 426.0 359 64.9
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 1.5e-116 424.1 473 53.9
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 2.6e-116 423.3 513 52.4
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 7.5e-116 421.8 507 48.7
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 1.7e-115 420.6 476 51.7
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 6.4e-115 418.7 409 56.7
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 9.2e-114 414.8 410 54.1
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 6.6e-112 408.7 418 56.5
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 3.3e-111 406.4 515 50.3
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.6e-110 402.9 397 59.2
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 6.0e-105 385.6 371 61.2
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 1.3e-104 384.4 477 53.2
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 5.0e-104 382.5 382 58.9
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 5.1e-96 355.9 381 52.5
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 1.2e-94 351.3 403 54.3
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 2.0e-92 344.0 517 42.7
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 6.6e-88 328.9 538 42.0
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 4.0e-85 319.7 525 39.0
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 2.6e-84 317.0 479 40.7
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.1e-82 311.6 313 53.7
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 1.9e-79 300.8 276 60.5
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 1.9e-79 300.8 276 60.5
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 2.1e-73 280.8 499 39.1
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 2.7e-73 280.4 279 54.1
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 6.2e-70 269.2 268 60.1
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 9.9e-68 261.9 235 59.6
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.3e-67 261.5 364 48.6
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 7.4e-63 245.7 306 46.7
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.6e-62 244.6 355 46.2
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 5.8e-60 236.1 602 33.1
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 1.1e-53 215.3 179 64.8
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.2e-50 203.4 309 47.6
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 6.5e-43 179.5 463 33.9
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 1.8e-40 171.4 236 51.3
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 2.3e-40 171.0 141 63.1
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 4.1e-37 160.2 161 55.3
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 2.0e-36 157.9 159 55.3
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 8.8e-24 115.9 108 53.7
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 7.5e-23 112.8 158 47.5
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 2.4e-21 107.8 128 47.7
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 2.0e-20 104.8 109 55.0
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 2.0e-20 104.8 109 55.0
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.5e-18 98.6 142 47.9
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 9.4e-18 95.9 193 44.0
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 2.6e-15 87.8 57 73.7
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 5.4e-13 80.1 83 59.0
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 5.4e-13 80.1 76 56.6
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 2.7e-12 77.8 210 33.8
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 3.5e-12 77.4 108 44.4
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.1e-10 72.4 145 37.9
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 2.5e-10 71.2 134 46.3
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 2.5e-10 71.2 72 58.3
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.8e-08 65.1 77 48.1
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 3.7e-06 57.4 99 50.5
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 8.3e-06 56.2 144 33.3


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