Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16297 Brassica carinata HOM05D002776 ORTHO05D003044 1.2e-40 169.5 87 100.0
BcaB03g15954 Brassica carinata HOM05D002776 ORTHO05D095932 3.2e-30 134.8 80 88.8
BcaB01g01631 Brassica carinata HOM05D002776 ORTHO05D003044 1.2e-21 106.3 56 94.6
BcaB08g35015 Brassica carinata HOM05D002776 ORTHO05D011320 4.3e-19 97.8 51 94.1
BcaB06g26729 Brassica carinata HOM05D002776 ORTHO05D000395 5.6e-19 97.4 56 83.9
BcaB05g23078 Brassica carinata HOM05D002776 ORTHO05D011320 7.3e-19 97.1 53 90.6
BcaB06g27028 Brassica carinata HOM05D002776 ORTHO05D003044 2.1e-18 95.5 51 92.2
BcaB01g03188 Brassica carinata HOM05D002776 ORTHO05D003044 1.4e-17 92.8 53 90.6
BcaB01g01307 Brassica carinata HOM05D002776 ORTHO05D003044 4.0e-17 91.3 47 95.7
BcaB04g18312 Brassica carinata HOM05D002776 ORTHO05D003044 4.0e-17 91.3 47 95.7
BcaB05g22944 Brassica carinata HOM05D002776 ORTHO05D000395 4.0e-17 91.3 47 93.6
BcaB04g17677 Brassica carinata HOM05D002776 ORTHO05D003044 6.8e-17 90.5 49 89.8
BcaB07g33314 Brassica carinata HOM05D002776 ORTHO05D003044 7.6e-16 87.0 47 89.4
BcaB05g23247 Brassica carinata HOM05D002776 ORTHO05D011320 1.1e-14 83.2 58 79.3
BolC6t36736H Brassica oleracea HOM05D002776 ORTHO05D011320 3.2e-14 81.6 47 85.1
BcaB06g26760 Brassica carinata HOM05D002776 ORTHO05D008559 4.2e-14 81.3 46 89.1
BolC5t32217H Brassica oleracea HOM05D002776 ORTHO05D011320 5.4e-14 80.9 47 85.1
BraA03t15647Z Brassica rapa HOM05D002776 ORTHO05D003044 5.4e-14 80.9 48 83.3
A01p26310 Brassica napus HOM05D002776 ORTHO05D011320 7.1e-14 80.5 47 85.1
A01p28530 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
A03p65940 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
A05p28380 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
A08p07560 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
A08p08130 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
A08p09940 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
A10p06820 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
C02p53520 Brassica napus HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
BolC3t17909H Brassica oleracea HOM05D002776 ORTHO05D003044 7.1e-14 80.5 47 85.1
BraA09t40150Z Brassica rapa HOM05D002776 ORTHO05D011320 7.1e-14 80.5 47 85.1
C07p38490 Brassica napus HOM05D002776 ORTHO05D011320 1.2e-13 79.7 55 70.9
C03p56210 Brassica napus HOM05D002776 ORTHO05D003044 2.1e-13 79.0 47 83.0
C09p16540 Brassica napus HOM05D002776 ORTHO05D011320 2.1e-13 79.0 46 84.8
BraA01t01978Z Brassica rapa HOM05D002776 ORTHO05D003044 2.1e-13 79.0 46 84.8
BcaC04g22429 Brassica carinata HOM05D002776 ORTHO05D011320 2.7e-13 78.6 47 83.0
BcaC06g36448 Brassica carinata HOM05D002776 ORTHO05D003044 2.7e-13 78.6 47 83.0
BcaC08g44371 Brassica carinata HOM05D002776 ORTHO05D003044 2.7e-13 78.6 47 83.0
A01p20500 Brassica napus HOM05D002776 ORTHO05D003044 2.7e-13 78.6 47 83.0
C03p65980 Brassica napus HOM05D002776 ORTHO05D003044 2.7e-13 78.6 51 78.4
C03p66380 Brassica napus HOM05D002776 ORTHO05D003044 2.7e-13 78.6 47 83.0
C09p19460 Brassica napus HOM05D002776 ORTHO05D003044 2.7e-13 78.6 47 83.0
BolC2t11289H Brassica oleracea HOM05D002776 ORTHO05D003044 2.7e-13 78.6 47 83.0
BolC3t18911H Brassica oleracea HOM05D002776 ORTHO05D003044 2.7e-13 78.6 47 83.0
BolC8t49070H Brassica oleracea HOM05D002776 ORTHO05D011320 2.7e-13 78.6 47 83.0
A10p06580 Brassica napus HOM05D002776 ORTHO05D000395 3.5e-13 78.2 47 83.0
BcaB07g33086 Brassica carinata HOM05D002776 ORTHO05D003044 6.0e-13 77.4 41 90.2
A03p54420 Brassica napus HOM05D002776 ORTHO05D003044 6.0e-13 77.4 47 83.0
C01p30580 Brassica napus HOM05D002776 ORTHO05D003044 6.0e-13 77.4 47 83.0
C04p36700 Brassica napus HOM05D002776 ORTHO05D011320 6.0e-13 77.4 47 83.0
BraA03t15291Z Brassica rapa HOM05D002776 ORTHO05D000395 6.0e-13 77.4 47 85.1
BcaC01g02374 Brassica carinata HOM05D002776 ORTHO05D003044 7.8e-13 77.0 48 79.2
C04p56090 Brassica napus HOM05D002776 ORTHO05D003044 7.8e-13 77.0 47 80.9
A09p33400 Brassica napus HOM05D002776 ORTHO05D003044 1.0e-12 76.6 47 80.9
BraA09t38883Z Brassica rapa HOM05D002776 ORTHO05D003044 1.0e-12 76.6 47 80.9
C03p75860 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-12 76.3 47 80.9
C07p49090 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-12 76.3 47 80.9
C08p06670 Brassica napus HOM05D002776 ORTHO05D003044 1.3e-12 76.3 47 80.9
C09p27490 Brassica napus HOM05D002776 ORTHO05D003044 3.9e-12 74.7 47 80.9
BcaB03g16806 Brassica carinata HOM05D002776 ORTHO05D003044 6.6e-12 73.9 48 79.2
BcaC09g48965 Brassica carinata HOM05D002776 ORTHO05D003044 6.6e-12 73.9 47 78.7
BcaC03g14316 Brassica carinata HOM05D002776 ORTHO05D011320 4.8e-10 67.8 40 80.0
BcaB05g23549 Brassica carinata HOM05D002776 ORTHO05D091522 1.1e-09 66.6 57 59.6
A07p02050 Brassica napus HOM05D002776 ORTHO05D003044 1.1e-09 66.6 46 69.6
C05p34920 Brassica napus HOM05D002776 ORTHO05D011320 1.4e-09 66.2 38 84.2
BcaB02g11226 Brassica carinata HOM05D002776 ORTHO05D003044 3.1e-09 65.1 44 70.5
BcaC08g43735 Brassica carinata HOM05D002776 ORTHO05D003044 5.3e-09 64.3 33 90.9
BcaC05g25874 Brassica carinata HOM05D002776 ORTHO05D003044 1.2e-08 63.2 38 78.9
BcaB07g32988 Brassica carinata HOM05D002776 ORTHO05D003044 7.6e-08 60.5 57 52.6
BcaB06g27856 Brassica carinata HOM05D002776 ORTHO05D003044 1.7e-07 59.3 32 87.5
C03p80440 Brassica napus HOM05D002776 ORTHO05D011320 2.9e-07 58.5 32 87.5
BcaB04g17778 Brassica carinata HOM05D002776 ORTHO05D003044 3.8e-07 58.2 44 63.6


User provided reference genes

Program Settings