Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 5.4e-66 254.2 132 100.0
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 1.1e-39 166.8 119 80.7
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.7e-25 119.0 103 71.8
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 2.7e-25 119.0 119 65.5
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 3.0e-24 115.5 91 76.9
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 3.0e-24 115.5 92 77.2
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 6.7e-24 114.4 96 72.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 6.7e-24 114.4 119 63.9
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 6.7e-24 114.4 119 64.7
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 1.5e-23 113.2 76 82.9
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 1.5e-23 113.2 91 73.6
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 2.0e-23 112.8 118 65.3
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 2.0e-23 112.8 118 65.3
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 2.0e-23 112.8 118 65.3
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 2.6e-23 112.5 91 74.7
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 4.4e-23 111.7 118 64.4
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 4.4e-23 111.7 118 64.4
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 5.7e-23 111.3 118 64.4
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 5.7e-23 111.3 118 64.4
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 7.4e-23 110.9 99 69.7
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 1.7e-22 109.8 118 62.7
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 2.2e-22 109.4 118 63.6
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 2.8e-22 109.0 118 61.9
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 4.8e-22 108.2 111 66.7
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 4.8e-22 108.2 118 62.7
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 6.3e-22 107.8 118 62.7
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 1.1e-21 107.1 111 65.8
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-21 106.3 118 61.0
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 1.8e-21 106.3 118 61.0
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 2.4e-21 105.9 118 62.7
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 3.1e-21 105.5 118 62.7
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 3.1e-21 105.5 118 62.7
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 4.1e-21 105.1 119 59.7
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 5.3e-21 104.8 99 67.7
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 6.9e-21 104.4 118 61.0
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 6.9e-21 104.4 118 61.9
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 9.1e-21 104.0 118 61.9
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 1.2e-20 103.6 119 61.3
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 2.0e-20 102.8 94 71.3
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 2.6e-20 102.4 118 61.0
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 3.4e-20 102.1 118 61.0
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-20 101.7 75 78.7
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 4.5e-20 101.7 77 77.9
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 5.9e-20 101.3 118 61.0
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 5.9e-20 101.3 112 60.7
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 5.9e-20 101.3 75 78.7
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 1.0e-19 100.5 93 66.7
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 1.3e-19 100.1 77 76.6
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-19 100.1 118 61.0
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 3.8e-19 98.6 139 55.4
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 4.2e-18 95.1 91 65.9
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 5.5e-18 94.7 91 65.9
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 1.6e-17 93.2 91 64.8
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 1.6e-17 93.2 116 56.9
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-17 93.2 75 73.3
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 2.1e-17 92.8 91 65.9
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 3.6e-17 92.0 109 61.5
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 6.1e-17 91.3 116 54.3
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 6.1e-17 91.3 68 75.0
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 6.1e-17 91.3 104 61.5
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 6.1e-17 91.3 66 75.8
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 8.0e-17 90.9 75 70.7
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 8.0e-17 90.9 76 73.7
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 8.8e-16 87.4 91 63.7
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 8.8e-16 87.4 96 62.5
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 1.5e-15 86.7 47 95.7
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 1.5e-15 86.7 59 81.4
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 2.0e-15 86.3 85 67.1
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 2.0e-15 86.3 55 83.6
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 5.7e-15 84.7 47 93.6
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 9.7e-15 84.0 105 56.2
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 1.3e-14 83.6 118 55.1
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 1.7e-14 83.2 93 61.3
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 2.2e-14 82.8 94 64.9
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 3.7e-14 82.0 59 79.7
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 6.3e-14 81.3 101 58.4
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 1.1e-13 80.5 115 52.2
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 4.1e-13 78.6 61 77.0
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.7e-11 73.2 118 50.8
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 1.7e-11 73.2 45 84.4
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 2.5e-10 69.3 129 48.8
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 9.4e-10 67.4 59 67.8
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 1.2e-09 67.0 102 47.1
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 1.6e-09 66.6 99 48.5
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 3.6e-09 65.5 43 79.1
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 8.0e-09 64.3 51 74.5
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 1.4e-08 63.5 79 51.9
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 1.8e-08 63.2 64 62.5
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.8e-08 63.2 79 51.9
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 1.8e-08 63.2 79 51.9
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 3.0e-08 62.4 120 44.2
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 3.0e-08 62.4 54 64.8
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 5.2e-08 61.6 33 93.9
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 6.7e-08 61.2 129 45.0
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 1.2e-07 60.5 121 43.8
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 2.0e-07 59.7 48 72.9
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 5.7e-07 58.2 119 43.7
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 5.7e-07 58.2 92 46.7
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 4.8e-06 55.1 37 75.7
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 4.8e-06 55.1 51 64.7


User provided reference genes

Program Settings