Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16102 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-37 159.5 85 100.0
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-34 149.4 86 95.3
BcaB06g26429 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-34 149.4 86 95.3
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.6e-31 139.0 86 90.7
BcaB03g14937 Brassica carinata HOM05D007203 ORTHO05D011558 2.7e-26 121.7 71 94.4
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 8.2e-23 110.2 86 76.7
BcaC09g49573 Brassica carinata HOM05D007203 ORTHO05D011558 8.2e-23 110.2 86 75.6
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 8.2e-23 110.2 86 75.6
BcaB03g16432 Brassica carinata HOM05D007203 ORTHO05D011558 6.9e-22 107.1 86 74.4
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 1.5e-21 105.9 86 74.4
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 2.0e-21 105.5 86 70.9
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 2.0e-21 105.5 86 70.9
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 2.2e-20 102.1 93 69.9
BcaB02g11368 Brassica carinata HOM05D007203 ORTHO05D011558 6.5e-20 100.5 86 73.3
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 6.5e-20 100.5 93 68.8
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 4.2e-19 97.8 93 65.6
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 5.5e-19 97.4 93 65.6
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 9.3e-19 96.7 93 65.6
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 9.3e-19 96.7 93 65.6
C03p33440 Brassica napus HOM05D007203 ORTHO05D027708 9.3e-19 96.7 93 65.6
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 9.3e-19 96.7 93 65.6
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 9.3e-19 96.7 93 65.6
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 9.3e-19 96.7 93 65.6
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 9.3e-19 96.7 93 65.6
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 9.3e-19 96.7 93 65.6
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 2.7e-18 95.1 93 64.5
C01p16070 Brassica napus HOM05D007203 ORTHO05D011558 2.7e-18 95.1 93 64.5
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 2.7e-18 95.1 93 64.5
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 3.5e-18 94.7 93 64.5
BolC2t09431H Brassica oleracea HOM05D007203 ORTHO05D027708 4.6e-18 94.4 93 64.5
BraA05t21718Z Brassica rapa HOM05D007203 ORTHO05D011558 1.0e-17 93.2 58 87.9
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 3.0e-17 91.7 55 89.1
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 3.9e-17 91.3 58 86.2
BcaC04g20467 Brassica carinata HOM05D007203 ORTHO05D027708 6.7e-17 90.5 92 62.0
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 1.6e-15 85.9 93 61.3
BcaC05g27919 Brassica carinata HOM05D007203 ORTHO05D039141 1.6e-15 85.9 103 56.3
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 1.6e-15 85.9 93 61.3
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 1.6e-15 85.9 103 56.3
BolC5t32660H Brassica oleracea HOM05D007203 ORTHO05D011558 1.6e-15 85.9 103 56.3
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 1.1e-14 83.2 72 72.2
C08p21920 Brassica napus HOM05D007203 ORTHO05D011558 1.1e-14 83.2 73 67.1
C03p35500 Brassica napus HOM05D007203 ORTHO05D011558 9.0e-14 80.1 73 65.8
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-13 79.7 77 58.4
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 2.2e-12 75.5 56 71.4
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-11 73.2 65 64.6
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 2.5e-11 72.0 95 50.5
C01p48560 Brassica napus HOM05D007203 ORTHO05D011558 3.2e-11 71.6 86 58.1
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 7.2e-11 70.5 49 77.6
A01p36010 Brassica napus HOM05D007203 ORTHO05D011558 3.6e-10 68.2 41 87.8
BolC9t57648H Brassica oleracea HOM05D007203 ORTHO05D011558 3.6e-10 68.2 41 87.8
C06p20830 Brassica napus HOM05D007203 ORTHO05D041891 7.9e-10 67.0 50 74.0
BolC6t36235H Brassica oleracea HOM05D007203 ORTHO05D011558 7.9e-10 67.0 41 85.4
BolC6t37269H Brassica oleracea HOM05D007203 ORTHO05D041891 7.9e-10 67.0 50 74.0
BolC5t32923H Brassica oleracea HOM05D007203 ORTHO05D011558 3.9e-09 64.7 41 85.4
BraA07t28681Z Brassica rapa HOM05D007203 ORTHO05D014981 3.3e-08 61.6 136 41.2
BcaB01g03085 Brassica carinata HOM05D007203 ORTHO05D011558 7.4e-08 60.5 51 66.7
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 1.7e-07 59.3 110 43.6
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.4e-06 56.2 54 63.0
C04p18990 Brassica napus HOM05D002042 ORTHO05D003928 1.4e-06 56.2 88 47.7
C01p15990 Brassica napus HOM05D007203 ORTHO05D011558 2.4e-06 55.5 42 71.4
C08p06790 Brassica napus HOM05D008062 ORTHO05D042315 2.4e-06 55.5 54 59.3
BolC8t47741H Brassica oleracea HOM05D039310 ORTHO05D032948 3.1e-06 55.1 57 54.4
BcaB01g01207 Brassica carinata HOM05D004128 ORTHO05D017536 9.1e-06 53.5 65 49.2


User provided reference genes

Program Settings