Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g16062 Brassica carinata HOM05D008073 ORTHO05D000309 7.6e-68 260.4 132 100.0
BcaB06g28129 Brassica carinata HOM05D008073 ORTHO05D000309 2.7e-57 225.3 122 91.8
BcaB02g11157 Brassica carinata HOM05D008073 ORTHO05D000309 4.9e-51 204.5 116 86.2
BcaC06g35486 Brassica carinata HOM05D008073 ORTHO05D000309 1.2e-44 183.3 116 73.3
A01p24520 Brassica napus HOM05D008073 ORTHO05D000309 2.0e-44 182.6 116 74.1
C07p15530 Brassica napus HOM05D008073 ORTHO05D000309 4.5e-44 181.4 116 73.3
BcaB02g10845 Brassica carinata HOM05D008073 ORTHO05D000309 7.6e-44 180.6 117 74.4
BcaC04g20561 Brassica carinata HOM05D008073 ORTHO05D000309 8.4e-43 177.2 116 73.3
A04p08080 Brassica napus HOM05D008073 ORTHO05D000309 3.2e-42 175.3 104 77.9
BraA04t16496Z Brassica rapa HOM05D008073 ORTHO05D000309 3.2e-42 175.3 104 77.9
C09p42090 Brassica napus HOM05D008073 ORTHO05D000309 4.2e-42 174.9 116 72.4
BcaC03g17928 Brassica carinata HOM05D008073 ORTHO05D000309 4.6e-41 171.4 116 68.1
BcaC06g36281 Brassica carinata HOM05D008073 ORTHO05D000309 7.9e-41 170.6 104 74.0
BcaB06g28160 Brassica carinata HOM05D008073 ORTHO05D000309 5.1e-40 167.9 116 68.1
C07p05860 Brassica napus HOM05D001957 ORTHO05D002015 8.7e-32 140.6 85 76.5
BcaB01g01302 Brassica carinata HOM05D008073 ORTHO05D000309 3.3e-31 138.7 74 89.2
BcaB05g24067 Brassica carinata HOM05D008073 ORTHO05D031741 3.1e-29 132.1 117 59.0
BcaNung00231 Brassica carinata HOM05D008073 ORTHO05D000309 5.3e-29 131.3 118 53.4
BcaB01g01612 Brassica carinata HOM05D008073 ORTHO05D000309 2.2e-27 125.9 111 55.9
BcaB08g36370 Brassica carinata HOM05D008073 ORTHO05D000309 2.9e-27 125.6 111 55.0
A02p37000 Brassica napus HOM05D008073 ORTHO05D000309 1.9e-26 122.9 111 55.0
BraA02t08687Z Brassica rapa HOM05D008073 ORTHO05D000309 1.9e-26 122.9 111 55.0
BcaC01g02160 Brassica carinata HOM05D008073 ORTHO05D000309 3.9e-24 115.2 117 51.3
C03p68050 Brassica napus HOM05D008073 ORTHO05D000309 3.9e-24 115.2 117 51.3
BcaC07g37763 Brassica carinata HOM05D008073 ORTHO05D000309 1.1e-23 113.6 117 50.4
BolC7t43639H Brassica oleracea HOM05D008073 ORTHO05D000309 7.4e-23 110.9 100 51.0
BolC8t48149H Brassica oleracea HOM05D008073 ORTHO05D000309 4.8e-22 108.2 90 58.9
C01p21890 Brassica napus HOM05D008073 ORTHO05D000309 1.5e-20 103.2 61 65.6
BolC1t02116H Brassica oleracea HOM05D008073 ORTHO05D000309 1.5e-20 103.2 61 65.6
A05p13640 Brassica napus HOM05D008073 ORTHO05D000309 7.2e-18 94.4 72 54.2
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 2.7e-17 92.4 97 49.5
C09p42360 Brassica napus HOM05D008073 ORTHO05D000309 1.8e-16 89.7 73 53.4
BolC9t57115H Brassica oleracea HOM05D008073 ORTHO05D000309 1.8e-16 89.7 73 53.4
BcaB04g19293 Brassica carinata HOM05D008073 ORTHO05D000309 5.2e-16 88.2 97 48.5
BcaC05g25280 Brassica carinata HOM05D008073 ORTHO05D000309 8.8e-16 87.4 76 52.6
BcaB06g26984 Brassica carinata HOM05D008073 ORTHO05D000309 2.0e-15 86.3 75 54.7
BcaB03g15638 Brassica carinata HOM05D008073 ORTHO05D000309 5.7e-15 84.7 74 54.1
BcaB05g25086 Brassica carinata HOM05D008073 ORTHO05D000309 7.4e-15 84.3 75 54.7
A07p31530 Brassica napus HOM05D008073 ORTHO05D000309 7.4e-15 84.3 128 35.2
BcaB04g18140 Brassica carinata HOM05D008073 ORTHO05D000309 1.4e-13 80.1 61 55.7
AT5G33393 Arabidopsis thaliana HOM05D008073 ORTHO05D081038 3.1e-13 79.0 68 47.1
BcaC09g50115 Brassica carinata HOM05D008073 ORTHO05D000309 3.1e-13 79.0 106 41.5
BolC3t19468H Brassica oleracea HOM05D008073 ORTHO05D000309 3.1e-13 79.0 85 50.6
BcaC03g14649 Brassica carinata HOM05D008073 ORTHO05D000309 5.3e-13 78.2 73 47.9
BcaC06g36745 Brassica carinata HOM05D008073 ORTHO05D031794 7.0e-13 77.8 122 37.7
BcaNung00469 Brassica carinata HOM05D008073 ORTHO05D000309 9.1e-13 77.4 77 46.8
BolC7t41880H Brassica oleracea HOM05D008073 ORTHO05D000309 2.0e-12 76.3 83 45.8
BolC1t03302H Brassica oleracea HOM05D008073 ORTHO05D000309 3.5e-12 75.5 73 50.7
BcaC03g14058 Brassica carinata HOM05D008073 ORTHO05D000309 5.9e-12 74.7 55 58.2
A08p09520 Brassica napus HOM05D008073 ORTHO05D031741 1.3e-11 73.6 70 55.7
BraA09t38926Z Brassica rapa HOM05D009173 ORTHO05D000309 6.5e-11 71.2 84 45.2
AT1G67235 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 1.9e-10 69.7 62 50.0
BcaC04g20065 Brassica carinata HOM05D008073 ORTHO05D000309 1.9e-10 69.7 126 37.3
Sp5g10600 Schrenkiella parvula HOM05D009173 ORTHO05D000309 3.2e-10 68.9 97 39.2
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 4.2e-10 68.6 95 38.9
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 9.4e-10 67.4 97 39.2
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 6.1e-09 64.7 89 37.1
AL1G56990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 8.0e-09 64.3 112 33.9
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 8.0e-09 64.3 80 40.0
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-08 63.9 97 38.1
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 1.0e-08 63.9 96 38.5
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-08 63.5 85 42.4
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 1.4e-08 63.5 89 42.7
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 1.4e-08 63.5 89 42.7
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 1.4e-08 63.5 88 37.5
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 1.4e-08 63.5 89 42.7
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 85 41.2
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 85 42.4
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-08 63.2 85 42.4
AL4G18060 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.3e-08 62.8 112 33.9
BcaC01g02366 Brassica carinata HOM05D009173 ORTHO05D000309 2.3e-08 62.8 123 33.3
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 2.3e-08 62.8 97 36.1
BolC3t18879H Brassica oleracea HOM05D009173 ORTHO05D000309 2.3e-08 62.8 123 33.3
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 4.0e-08 62.0 72 43.1
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-08 61.6 84 41.7
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-08 61.6 77 42.9
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 5.2e-08 61.6 82 36.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 5.2e-08 61.6 71 40.8
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 8.8e-08 60.8 92 37.0
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 1.2e-07 60.5 94 36.2
AT1G52603 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 1.5e-07 60.1 66 34.8
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 1.5e-07 60.1 109 30.3
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-07 59.7 92 35.9
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 2.6e-07 59.3 95 37.9
AL2G19320 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 5.7e-07 58.2 68 41.2
AL5G24470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 5.7e-07 58.2 88 38.6
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 5.7e-07 58.2 69 39.1
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 5.7e-07 58.2 88 35.2
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 7.5e-07 57.8 98 32.7
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 7.5e-07 57.8 86 40.7
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 7.5e-07 57.8 74 37.8
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 9.7e-07 57.4 74 36.5
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-06 57.0 91 31.9
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-06 56.6 70 41.4
BcaC08g43001 Brassica carinata HOM05D009173 ORTHO05D000309 1.7e-06 56.6 91 35.2
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-06 56.2 70 41.4
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-06 56.2 70 41.4
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 2.2e-06 56.2 88 36.4
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-06 56.2 70 41.4
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-06 56.2 70 41.4
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-06 56.2 70 41.4
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-06 56.2 76 36.8
AL3G40990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.8e-06 55.8 85 37.6
BcaB04g16980 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-06 55.8 70 41.4
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-06 55.8 74 35.1
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 2.8e-06 55.8 129 27.9
AL6G49470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.7e-06 55.5 85 37.6
BcaB05g23793 Brassica carinata HOM05D007774 ORTHO05D000309 3.7e-06 55.5 85 35.3
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 4.8e-06 55.1 70 41.4
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 6.3e-06 54.7 84 27.4
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 6.3e-06 54.7 85 32.9


User provided reference genes

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