Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15788 Brassica carinata HOM05D004052 ORTHO05D004694 1.8e-48 195.7 103 100.0
BcaB03g15049 Brassica carinata HOM05D004052 ORTHO05D004694 2.5e-42 175.3 93 97.8
BcaB03g16595 Brassica carinata HOM05D004052 ORTHO05D004694 4.7e-41 171.0 97 91.8
BcaB03g15566 Brassica carinata HOM05D004052 ORTHO05D004694 1.1e-40 169.9 97 91.8
BcaB03g15574 Brassica carinata HOM05D004052 ORTHO05D004694 1.8e-40 169.1 97 91.8
BcaB03g15581 Brassica carinata HOM05D004052 ORTHO05D004694 1.8e-40 169.1 97 91.8
Thhalv10008080m.g Eutrema salsugineum HOM05D004052 ORTHO05D004694 9.9e-31 136.7 101 74.3
AT1G17140 Arabidopsis thaliana HOM05D004052 ORTHO05D004694 6.4e-30 134.0 99 75.8
AL1G29350 Arabidopsis lyrata HOM05D004052 ORTHO05D004694 1.9e-29 132.5 99 74.7
CARHR017680 Cardamine hirsuta HOM05D004052 ORTHO05D004694 7.8e-28 127.1 100 73.0
Sp1g15260 Schrenkiella parvula HOM05D004052 ORTHO05D004694 7.8e-28 127.1 100 69.0
BcaC07g41402 Brassica carinata HOM05D004052 ORTHO05D004694 1.9e-26 122.5 97 68.0
Carub.0001s1687 Capsella rubella HOM05D004052 ORTHO05D004694 9.5e-26 120.2 100 71.0
BcaB03g13016 Brassica carinata HOM05D004052 ORTHO05D004694 1.2e-25 119.8 94 72.3
BraA06t24462Z Brassica rapa HOM05D004052 ORTHO05D004694 1.2e-25 119.8 100 69.0
A06p13030 Brassica napus HOM05D004052 ORTHO05D004694 8.1e-25 117.1 96 70.8
C05p15490 Brassica napus HOM05D004052 ORTHO05D004694 6.8e-24 114.0 101 68.3
C08p44040 Brassica napus HOM05D004052 ORTHO05D004694 6.8e-24 114.0 97 68.0
BcaB07g34049 Brassica carinata HOM05D004052 ORTHO05D004694 1.5e-23 112.8 97 68.0
BcaC07g41439 Brassica carinata HOM05D004052 ORTHO05D004694 2.0e-23 112.5 97 67.0
BolC8t51952H Brassica oleracea HOM05D004052 ORTHO05D004694 2.0e-23 112.5 97 67.0
A09p60580 Brassica napus HOM05D004052 ORTHO05D004694 2.6e-23 112.1 97 68.0
BraA09t41428Z Brassica rapa HOM05D004052 ORTHO05D004694 1.3e-22 109.8 97 67.0
Aa31LG7G1980 Aethionema arabicum HOM05D004052 ORTHO05D004694 5.4e-21 104.4 101 62.4
BcaC07g38832 Brassica carinata HOM05D004052 ORTHO05D004694 1.9e-18 95.9 83 67.5
C08p17720 Brassica napus HOM05D004052 ORTHO05D004694 1.9e-18 95.9 83 67.5
BolC8t49398H Brassica oleracea HOM05D004052 ORTHO05D004694 1.9e-18 95.9 83 67.5
A08p31110 Brassica napus HOM05D004052 ORTHO05D004694 3.3e-18 95.1 83 68.7
BraA08t35037Z Brassica rapa HOM05D004052 ORTHO05D004694 3.3e-18 95.1 83 68.7
BcaC05g25666 Brassica carinata HOM05D004052 ORTHO05D004694 1.1e-16 90.1 100 60.0
BolC5t30258H Brassica oleracea HOM05D004052 ORTHO05D004694 5.3e-16 87.8 100 60.0
THA.LOC104812292 Tarenaya hassleriana HOM05D004052 ORTHO05D004694 1.1e-13 80.1 105 47.6
THA.LOC104808079 Tarenaya hassleriana HOM05D004052 ORTHO05D004694 4.2e-13 78.2 96 51.0
Carub.0002s2533 Capsella rubella HOM05D004052 ORTHO05D004694 1.6e-09 66.2 96 46.9
AL2G38800 Arabidopsis lyrata HOM05D004052 ORTHO05D004694 1.2e-07 60.1 72 51.4
Thhalv10019440m.g Eutrema salsugineum HOM05D004052 ORTHO05D004694 1.2e-07 60.1 92 40.2
AT1G78430 Arabidopsis thaliana HOM05D004052 ORTHO05D004694 1.5e-07 59.7 100 40.0
BcaB02g07171 Brassica carinata HOM05D004052 ORTHO05D004694 2.2e-06 55.8 90 46.7
BolC6t38209H Brassica oleracea HOM05D004052 ORTHO05D004694 2.2e-06 55.8 103 42.7
A07p27520 Brassica napus HOM05D004052 ORTHO05D004694 4.9e-06 54.7 103 41.7
BraA07t30394Z Brassica rapa HOM05D004052 ORTHO05D004694 4.9e-06 54.7 103 41.7
CARHR071950 Cardamine hirsuta HOM05D004052 ORTHO05D004694 4.9e-06 54.7 95 42.1


User provided reference genes

Program Settings