Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 3.8e-108 394.8 193 100.0
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 6.2e-95 350.9 199 89.4
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 6.2e-95 350.9 199 89.4
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 1.1e-94 350.1 199 88.9
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 2.4e-94 349.0 199 88.4
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 2.4e-94 349.0 199 88.4
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 1.0e-89 333.6 198 85.4
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 3.9e-89 331.6 193 86.0
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 3.9e-89 331.6 193 86.0
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.5e-85 319.7 188 83.5
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 7.1e-83 310.8 198 79.3
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 1.6e-82 309.7 193 81.3
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 7.9e-82 307.4 181 83.4
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 1.0e-81 307.0 181 83.4
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 1.3e-81 306.6 196 77.0
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 6.7e-81 304.3 181 81.8
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 1.1e-80 303.5 196 80.1
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 5.7e-80 301.2 181 81.8
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 2.8e-79 298.9 181 80.7
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 5.9e-77 291.2 185 73.5
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 7.2e-67 257.7 192 63.5
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 1.6e-66 256.5 192 63.0
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.0e-65 253.8 190 64.7
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.4e-65 253.4 190 63.7
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 1.8e-65 253.1 194 63.9
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 5.1e-65 251.5 194 62.9
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 3.3e-64 248.8 194 62.9
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 2.2e-63 246.1 184 63.6
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 2.2e-63 246.1 194 61.9
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 6.3e-63 244.6 187 62.6
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 6.3e-63 244.6 192 62.5
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 1.1e-62 243.8 189 61.9
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 1.4e-62 243.4 191 63.4
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 1.8e-62 243.0 183 60.7
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.8e-62 243.0 196 61.2
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 3.1e-62 242.3 185 62.2
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 9.1e-62 240.7 192 61.5
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 9.1e-62 240.7 185 60.5
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.2e-61 240.4 194 60.3
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 1.2e-61 240.4 194 60.3
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.5e-61 240.0 188 61.2
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 2.6e-61 239.2 176 64.8
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 4.5e-61 238.4 183 62.8
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 5.9e-61 238.0 180 65.0
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 5.9e-61 238.0 193 59.1
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 5.9e-61 238.0 184 61.4
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 2.2e-60 236.1 194 58.8
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 3.8e-60 235.3 177 65.0
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 5.0e-60 235.0 169 64.5
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 5.0e-60 235.0 180 63.3
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 5.0e-60 235.0 184 61.4
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 6.5e-60 234.6 183 61.2
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 6.5e-60 234.6 191 60.2
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 1.1e-59 233.8 191 59.2
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.1e-59 233.8 187 61.0
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 1.1e-59 233.8 179 63.1
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 3.2e-59 232.3 177 60.5
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 7.2e-59 231.1 190 58.4
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 9.4e-59 230.7 165 62.4
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.2e-58 230.3 183 61.7
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 1.2e-58 230.3 180 61.7
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 1.6e-58 229.9 196 60.2
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 2.1e-58 229.6 196 60.7
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.7e-58 229.2 175 60.0
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 3.6e-58 228.8 189 59.8
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 3.6e-58 228.8 191 57.6
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 4.7e-58 228.4 189 60.8
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.0e-57 227.3 178 62.4
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 2.3e-57 226.1 184 59.2
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 8.8e-57 224.2 180 59.4
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 8.8e-57 224.2 185 60.5
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 1.5e-56 223.4 186 58.6
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.5e-56 223.4 181 59.1
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 1.5e-56 223.4 176 61.4
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 1.5e-56 223.4 177 58.8
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 3.3e-56 222.2 150 65.3
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 4.4e-56 221.9 187 57.2
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 4.4e-56 221.9 194 62.9
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 4.4e-56 221.9 185 57.8
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 4.4e-56 221.9 186 58.6
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 5.7e-56 221.5 177 58.2
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 5.7e-56 221.5 177 57.6
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 9.7e-56 220.7 177 57.6
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.7e-55 219.9 180 57.8
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.7e-55 219.9 150 64.7
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 8.2e-55 217.6 204 52.5
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 8.2e-55 217.6 186 54.3
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.4e-54 216.9 186 54.3
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 1.8e-54 216.5 187 55.1
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 4.1e-54 215.3 183 57.9
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 5.3e-54 214.9 156 60.9
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 7.0e-54 214.5 150 64.0
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 9.1e-54 214.2 180 57.8
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.2e-53 213.8 175 58.3
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 5.9e-53 211.5 183 54.6
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 2.2e-52 209.5 163 58.9
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 3.8e-52 208.8 201 50.7
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 3.8e-52 208.8 206 51.5
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 5.5e-51 204.9 149 61.7
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 7.2e-51 204.5 174 60.9
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 7.2e-51 204.5 156 61.5
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.6e-50 203.4 195 52.3
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 6.1e-50 201.4 220 51.4
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 2.3e-49 199.5 171 55.6
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 6.8e-49 198.0 180 55.6
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.5e-48 196.8 179 52.5
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 5.3e-46 188.3 177 52.0
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 5.0e-44 181.8 197 49.2
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 1.1e-43 180.6 176 51.1
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 2.5e-43 179.5 183 48.6
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 8.8e-41 171.0 188 46.8
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 2.8e-39 166.0 140 57.9
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 1.3e-36 157.1 147 55.8
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 5.5e-35 151.8 117 61.5
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.2e-34 150.6 121 62.8
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 8.0e-34 147.9 111 61.3
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.3e-33 146.4 157 44.6
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.3e-33 146.4 157 44.6
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 6.8e-33 144.8 129 56.6
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.5e-32 143.7 102 66.7
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.4e-32 142.1 150 44.0
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 1.3e-28 130.6 124 54.8
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 3.3e-27 125.9 157 39.5
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 3.6e-18 95.9 70 58.6
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 4.7e-18 95.5 154 31.2
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 1.1e-17 94.4 73 57.5
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 2.3e-17 93.2 71 59.2
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 2.0e-16 90.1 82 48.8
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.9e-15 85.5 112 42.0
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 6.4e-15 85.1 67 55.2
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 1.1e-14 84.3 67 56.7
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 1.2e-13 80.9 73 57.5
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 7.8e-13 78.2 60 68.3
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.3e-12 77.4 136 27.9
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 3.0e-12 76.3 63 55.6
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.1e-09 67.8 143 21.7


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