Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15581 Brassica carinata HOM05D004052 ORTHO05D004694 4.0e-108 394.8 204 100.0
BcaB03g15574 Brassica carinata HOM05D004052 ORTHO05D004694 8.1e-77 290.8 219 79.0
BcaB03g15566 Brassica carinata HOM05D004052 ORTHO05D004694 3.9e-71 271.9 186 84.9
BcaB03g16595 Brassica carinata HOM05D004052 ORTHO05D004694 6.0e-56 221.5 129 93.0
BcaB03g15049 Brassica carinata HOM05D004052 ORTHO05D004694 8.4e-50 201.1 123 89.4
AL1G29350 Arabidopsis lyrata HOM05D004052 ORTHO05D004694 1.4e-41 173.7 129 76.7
BcaB03g15788 Brassica carinata HOM05D004052 ORTHO05D004694 4.6e-40 168.7 97 91.8
A06p13030 Brassica napus HOM05D004052 ORTHO05D004694 1.8e-39 166.8 132 73.5
Sp1g15260 Schrenkiella parvula HOM05D004052 ORTHO05D004694 3.9e-39 165.6 130 72.3
BcaC07g41402 Brassica carinata HOM05D004052 ORTHO05D004694 1.1e-38 164.1 128 71.1
CARHR017680 Cardamine hirsuta HOM05D004052 ORTHO05D004694 4.3e-38 162.2 126 74.6
AT1G17140 Arabidopsis thaliana HOM05D004052 ORTHO05D004694 2.2e-37 159.8 118 77.1
C08p44040 Brassica napus HOM05D004052 ORTHO05D004694 1.5e-35 153.7 128 70.3
A09p60580 Brassica napus HOM05D004052 ORTHO05D004694 2.6e-35 152.9 127 71.7
Aa31LG7G1980 Aethionema arabicum HOM05D004052 ORTHO05D004694 3.4e-35 152.5 133 68.4
BcaC07g41439 Brassica carinata HOM05D004052 ORTHO05D004694 4.5e-35 152.1 128 69.5
BolC8t51952H Brassica oleracea HOM05D004052 ORTHO05D004694 4.5e-35 152.1 128 69.5
BraA09t41428Z Brassica rapa HOM05D004052 ORTHO05D004694 1.3e-34 150.6 127 70.9
BraA06t24462Z Brassica rapa HOM05D004052 ORTHO05D004694 5.0e-34 148.7 122 69.7
Thhalv10008080m.g Eutrema salsugineum HOM05D004052 ORTHO05D004694 1.1e-33 147.5 112 74.1
C05p15490 Brassica napus HOM05D004052 ORTHO05D004694 6.1e-32 141.7 118 72.0
BcaB03g13016 Brassica carinata HOM05D004052 ORTHO05D004694 3.9e-31 139.0 115 70.4
Carub.0001s1687 Capsella rubella HOM05D004052 ORTHO05D004694 7.4e-30 134.8 114 71.1
BcaC05g25666 Brassica carinata HOM05D004052 ORTHO05D004694 8.2e-29 131.3 127 66.1
BcaB07g34049 Brassica carinata HOM05D004052 ORTHO05D004694 1.2e-27 127.5 107 70.1
BolC5t30258H Brassica oleracea HOM05D004052 ORTHO05D004694 2.3e-23 113.2 117 64.1
A08p31110 Brassica napus HOM05D004052 ORTHO05D004694 2.2e-21 106.7 91 70.3
BraA08t35037Z Brassica rapa HOM05D004052 ORTHO05D004694 2.2e-21 106.7 91 70.3
THA.LOC104808079 Tarenaya hassleriana HOM05D004052 ORTHO05D004694 1.4e-20 104.0 117 53.8
BcaC07g38832 Brassica carinata HOM05D004052 ORTHO05D004694 3.1e-20 102.8 124 55.6
C08p17720 Brassica napus HOM05D004052 ORTHO05D004694 3.1e-20 102.8 124 55.6
BolC8t49398H Brassica oleracea HOM05D004052 ORTHO05D004694 3.1e-20 102.8 124 55.6
AL2G38800 Arabidopsis lyrata HOM05D004052 ORTHO05D004694 2.1e-16 90.1 131 47.3
AT1G78430 Arabidopsis thaliana HOM05D004052 ORTHO05D004694 2.7e-16 89.7 129 45.0
THA.LOC104812292 Tarenaya hassleriana HOM05D004052 ORTHO05D004694 2.7e-16 89.7 115 49.6
BolC6t38209H Brassica oleracea HOM05D004052 ORTHO05D004694 1.8e-15 87.0 132 47.7
A07p27520 Brassica napus HOM05D004052 ORTHO05D004694 4.0e-15 85.9 132 47.0
BraA07t30394Z Brassica rapa HOM05D004052 ORTHO05D004694 4.0e-15 85.9 132 47.0
C06p30460 Brassica napus HOM05D004052 ORTHO05D004694 1.5e-14 84.0 131 46.6
BcaB02g07171 Brassica carinata HOM05D004052 ORTHO05D004694 5.7e-14 82.0 109 53.2
Aa31LG4G2530 Aethionema arabicum HOM05D004052 ORTHO05D004694 9.7e-14 81.3 129 47.3
Carub.0002s2533 Capsella rubella HOM05D004052 ORTHO05D004694 1.8e-12 77.0 108 48.1
CARHR071950 Cardamine hirsuta HOM05D004052 ORTHO05D004694 4.5e-11 72.4 111 45.9
Thhalv10019440m.g Eutrema salsugineum HOM05D004052 ORTHO05D004694 3.8e-10 69.3 102 42.2
MD05G1208600 Malus domestica HOM05D004052 ORTHO05D004694 8.0e-08 61.6 173 30.1
ECA234G3832 Erigeron canadensis HOM05D004052 ORTHO05D004694 1.8e-07 60.5 163 35.6
Lsat_1_v5_gn_5_125041 Lactuca sativa HOM05D004052 ORTHO05D004694 6.8e-07 58.5 123 32.5
Manes.15G101600 Manihot esculenta HOM05D004052 ORTHO05D004694 1.5e-06 57.4 165 32.1
GSVIVG01038086001 Vitis vinifera HOM05D004052 ORTHO05D004694 1.5e-06 57.4 144 34.7
Prupe.4G148800 Prunus persica HOM05D004052 ORTHO05D004694 2.0e-06 57.0 170 31.2
RcHm_v2.0_Chr5g0027741 Rosa chinensis HOM05D004052 ORTHO05D004694 3.4e-06 56.2 167 31.7
Cpa.g.sc77.96 Carica papaya HOM05D004052 ORTHO05D004694 4.4e-06 55.8 92 38.0
Glyma.15G248900 Glycine max HOM05D004052 ORTHO05D004694 9.8e-06 54.7 173 30.6


User provided reference genes

Program Settings