Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15579 Brassica carinata HOM05D008340 ORTHO05D018575 7.9e-206 720.3 391 100.0
BcaNung06884 Brassica carinata HOM05D000496 ORTHO05D000411 4.2e-106 389.0 395 58.7
BcaNung03207 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-102 375.9 391 57.3
BcaC02g10483 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-99 366.7 395 54.4
BcaC03g17002 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-97 360.1 367 58.0
BcaC01g02555 Brassica carinata HOM05D008340 ORTHO05D000411 3.7e-94 349.4 395 54.4
BcaB03g15572 Brassica carinata HOM05D008340 ORTHO05D018575 2.2e-78 297.0 153 100.0
BcaC09g49093 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-70 270.4 371 50.7
BcaB01g01758 Brassica carinata HOM05D000496 ORTHO05D000411 9.1e-69 265.0 395 46.3
A03p33500 Brassica napus HOM05D008340 ORTHO05D018575 3.8e-51 206.5 355 41.7
BcaC03g15600 Brassica carinata HOM05D008340 ORTHO05D014940 5.6e-34 149.4 154 56.5
BcaB07g32720 Brassica carinata HOM05D000496 ORTHO05D000411 2.8e-33 147.1 343 34.4
BcaB08g36780 Brassica carinata HOM05D000496 ORTHO05D000411 2.3e-32 144.1 381 32.5
BcaB03g16440 Brassica carinata HOM05D000010 ORTHO05D003912 4.0e-32 143.3 143 62.2
BcaC09g51821 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-26 125.2 265 38.5
BcaC03g14874 Brassica carinata HOM05D000496 ORTHO05D018575 2.1e-25 120.9 250 37.2
BcaB08g35496 Brassica carinata HOM05D000496 ORTHO05D000411 8.1e-25 119.0 271 37.3
BraA01t02423Z Brassica rapa HOM05D008340 ORTHO05D014933 1.4e-24 118.2 415 32.3
BolC7t43002H Brassica oleracea HOM05D008340 ORTHO05D018575 3.1e-24 117.1 109 63.3
BcaB02g11247 Brassica carinata HOM05D006180 ORTHO05D018575 3.4e-23 113.6 158 48.7
BcaC02g08738 Brassica carinata HOM05D008340 ORTHO05D000411 4.4e-23 113.2 249 35.3
BolC5t33350H Brassica oleracea HOM05D008340 ORTHO05D014933 1.6e-20 104.8 349 32.4
C08p01840 Brassica napus HOM05D000496 ORTHO05D000411 7.8e-20 102.4 219 36.1
BraA01t02205Z Brassica rapa HOM05D008340 ORTHO05D018575 2.3e-19 100.9 104 53.8
BcaC02g09839 Brassica carinata HOM05D008340 ORTHO05D027352 5.1e-19 99.8 378 31.7
BcaC03g14866 Brassica carinata HOM05D008340 ORTHO05D027352 6.6e-19 99.4 173 40.5
BcaC01g03406 Brassica carinata HOM05D008340 ORTHO05D014933 4.3e-18 96.7 350 29.7
C02p23460 Brassica napus HOM05D008340 ORTHO05D018575 9.6e-18 95.5 120 45.0
BcaC07g38360 Brassica carinata HOM05D000496 ORTHO05D000411 9.9e-15 85.5 348 29.6
BcaB07g33775 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-12 76.6 345 29.3
BcaB07g33233 Brassica carinata HOM05D000496 ORTHO05D000411 1.0e-11 75.5 344 28.5
A01p25120 Brassica napus HOM05D008340 ORTHO05D014933 1.0e-11 75.5 109 42.2
BcaC09g49534 Brassica carinata HOM05D008340 ORTHO05D014933 1.7e-11 74.7 421 29.0
A09p42890 Brassica napus HOM05D008340 ORTHO05D000411 3.9e-11 73.6 350 28.3
A01p26760 Brassica napus HOM05D000496 ORTHO05D000411 1.5e-10 71.6 352 29.8
C01p35490 Brassica napus HOM05D008340 ORTHO05D014933 4.3e-10 70.1 279 30.5
BcaC06g34939 Brassica carinata HOM05D032206 ORTHO05D014933 1.3e-09 68.6 223 27.4
BcaB01g01234 Brassica carinata HOM05D008340 ORTHO05D014933 1.6e-09 68.2 64 56.2
C01p42910 Brassica napus HOM05D008340 ORTHO05D014933 3.6e-09 67.0 326 28.2
A09p42770 Brassica napus HOM05D008340 ORTHO05D027787 1.4e-08 65.1 377 28.4
C03p69720 Brassica napus HOM05D008340 ORTHO05D027787 9.0e-08 62.4 152 37.5
BolC1t03052H Brassica oleracea HOM05D008340 ORTHO05D000411 9.0e-08 62.4 352 27.6
BcaC08g44588 Brassica carinata HOM05D008792 ORTHO05D018580 1.5e-07 61.6 73 43.8
C01p31180 Brassica napus HOM05D008340 ORTHO05D000411 1.5e-07 61.6 352 27.6
C05p40610 Brassica napus HOM05D008340 ORTHO05D040015 1.5e-07 61.6 358 29.1
BolC4t23565H Brassica oleracea HOM05D032206 ORTHO05D018580 4.5e-07 60.1 132 31.1
BcaC01g03819 Brassica carinata HOM05D000496 ORTHO05D039116 2.2e-06 57.8 323 26.3
BcaC06g35912 Brassica carinata HOM05D032206 ORTHO05D091147 3.8e-06 57.0 315 23.5
A09p28520 Brassica napus HOM05D008340 ORTHO05D032063 8.4e-06 55.8 84 47.6


User provided reference genes

Program Settings