Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15572 Brassica carinata HOM05D008340 ORTHO05D018575 1.6e-80 302.8 156 100.0
BcaB03g15579 Brassica carinata HOM05D008340 ORTHO05D018575 3.0e-79 298.5 153 100.0
BcaC02g10483 Brassica carinata HOM05D000496 ORTHO05D000411 1.7e-42 176.4 145 63.4
BcaNung06884 Brassica carinata HOM05D000496 ORTHO05D000411 8.4e-42 174.1 137 67.9
BcaC03g17002 Brassica carinata HOM05D000496 ORTHO05D000411 4.6e-40 168.3 146 63.0
BcaC09g49093 Brassica carinata HOM05D000496 ORTHO05D000411 6.3e-37 157.9 133 68.4
BcaNung03207 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-34 150.2 125 67.2
BcaC03g15600 Brassica carinata HOM05D008340 ORTHO05D014940 2.7e-32 142.5 138 59.4
BcaC01g02555 Brassica carinata HOM05D008340 ORTHO05D000411 2.5e-30 136.0 119 60.5
BcaB03g16440 Brassica carinata HOM05D000010 ORTHO05D003912 1.3e-29 133.7 126 63.5
BcaB07g32720 Brassica carinata HOM05D000496 ORTHO05D000411 4.5e-27 125.2 106 61.3
BcaB08g36780 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-26 121.7 134 50.7
A03p33500 Brassica napus HOM05D008340 ORTHO05D018575 5.5e-25 118.2 145 47.6
BcaB01g01758 Brassica carinata HOM05D000496 ORTHO05D000411 4.7e-24 115.2 157 47.1
BcaB02g11247 Brassica carinata HOM05D006180 ORTHO05D018575 4.7e-24 115.2 123 55.3
BolC7t43002H Brassica oleracea HOM05D008340 ORTHO05D018575 2.2e-21 106.3 94 66.0
BraA01t02205Z Brassica rapa HOM05D008340 ORTHO05D018575 2.5e-17 92.8 87 55.2
C01p42910 Brassica napus HOM05D008340 ORTHO05D014933 3.7e-13 79.0 77 54.5
BolC5t33350H Brassica oleracea HOM05D008340 ORTHO05D014933 3.7e-13 79.0 111 43.2
A01p25120 Brassica napus HOM05D008340 ORTHO05D014933 8.2e-13 77.8 64 59.4
BraA01t02423Z Brassica rapa HOM05D008340 ORTHO05D014933 8.2e-13 77.8 64 59.4
C02p23460 Brassica napus HOM05D008340 ORTHO05D018575 3.5e-11 72.4 94 42.6
BcaC03g14866 Brassica carinata HOM05D008340 ORTHO05D027352 1.3e-10 70.5 67 58.2
BcaB01g01234 Brassica carinata HOM05D008340 ORTHO05D014933 6.5e-10 68.2 64 56.2
BcaC07g38360 Brassica carinata HOM05D000496 ORTHO05D000411 8.5e-10 67.8 129 34.9
BcaC01g03406 Brassica carinata HOM05D008340 ORTHO05D014933 4.2e-09 65.5 83 47.0
BcaC02g09839 Brassica carinata HOM05D008340 ORTHO05D027352 1.2e-08 63.9 64 54.7
BcaC08g44588 Brassica carinata HOM05D008792 ORTHO05D018580 6.1e-08 61.6 73 43.8
BolC4t23565H Brassica oleracea HOM05D032206 ORTHO05D018580 3.0e-07 59.3 111 34.2
BcaB07g33775 Brassica carinata HOM05D000496 ORTHO05D000411 4.0e-07 58.9 112 37.5
A09p42890 Brassica napus HOM05D008340 ORTHO05D000411 4.0e-07 58.9 121 38.8
BcaB07g33233 Brassica carinata HOM05D000496 ORTHO05D000411 6.7e-07 58.2 99 39.4
BcaC06g35912 Brassica carinata HOM05D032206 ORTHO05D091147 1.2e-06 57.4 89 37.1
A09p28520 Brassica napus HOM05D008340 ORTHO05D032063 1.5e-06 57.0 84 47.6
BcaC06g34939 Brassica carinata HOM05D032206 ORTHO05D014933 9.7e-06 54.3 83 37.3


User provided reference genes

Program Settings