Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15526 Brassica carinata HOM05D007954 ORTHO05D010124 2.0e-28 128.3 60 100.0
BcaB05g22706 Brassica carinata HOM05D001308 ORTHO05D010124 3.2e-21 104.4 59 81.4
AT5G39330 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 2.1e-17 91.7 59 67.8
Thhalv10019156m.g Eutrema salsugineum HOM05D007954 ORTHO05D010124 3.1e-16 87.8 56 69.6
AL2G29250 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.2e-16 87.0 59 62.7
AT1G70020 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 5.2e-16 87.0 59 62.7
Carub.0007s3660 Capsella rubella HOM05D007954 ORTHO05D010124 1.5e-15 85.5 60 66.7
AL7G51140 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 9.8e-15 82.8 55 67.3
BcaC08g46453 Brassica carinata HOM05D007954 ORTHO05D010124 1.1e-13 79.3 58 53.4
BolC6t39464H Brassica oleracea HOM05D007954 ORTHO05D010124 1.1e-13 79.3 58 53.4
AL5G35460 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 2.4e-13 78.2 57 57.9
C06p44270 Brassica napus HOM05D007954 ORTHO05D010124 4.1e-13 77.4 58 55.2
C06p43900 Brassica napus HOM05D007954 ORTHO05D010124 5.4e-13 77.0 57 56.1
Carub.0002s1672 Capsella rubella HOM05D007954 ORTHO05D010124 5.4e-13 77.0 57 56.1
C06p43910 Brassica napus HOM05D007954 ORTHO05D010124 7.1e-13 76.6 57 56.1
BcaC08g46451 Brassica carinata HOM05D007954 ORTHO05D010124 1.6e-12 75.5 58 53.4
BolC6t39462H Brassica oleracea HOM05D007954 ORTHO05D010124 1.6e-12 75.5 58 53.4
A07p36460 Brassica napus HOM05D007954 ORTHO05D010124 2.7e-12 74.7 57 52.6
BraA07t31216Z Brassica rapa HOM05D007954 ORTHO05D010124 2.7e-12 74.7 57 54.4
BraA07t31217Z Brassica rapa HOM05D007954 ORTHO05D010124 2.7e-12 74.7 57 52.6
CARHR263080 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.7e-12 74.7 60 61.7
BcaC08g46452 Brassica carinata HOM05D007954 ORTHO05D010124 3.5e-12 74.3 57 54.4
CARHR063130 Cardamine hirsuta HOM05D007954 ORTHO05D010124 3.5e-12 74.3 58 51.7
AT1G70040 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 6.0e-12 73.6 57 54.4
BcaC08g46450 Brassica carinata HOM05D007954 ORTHO05D010124 6.0e-12 73.6 55 69.1
BolC6t39460H Brassica oleracea HOM05D007954 ORTHO05D010124 6.0e-12 73.6 55 69.1
BcaB05g24522 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-11 72.8 58 51.7
BcaB05g24523 Brassica carinata HOM05D007954 ORTHO05D010124 1.0e-11 72.8 58 51.7
AL2G29310 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.3e-11 72.4 57 54.4
AL2G29370 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 1.7e-11 72.0 57 50.9
BcaB03g15527 Brassica carinata HOM05D007954 ORTHO05D010124 2.3e-11 71.6 39 79.5
AT1G70120 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 3.0e-11 71.2 57 50.9
BcaB03g14782 Brassica carinata HOM05D007954 ORTHO05D010124 1.1e-10 69.3 57 49.1
BcaB05g24528 Brassica carinata HOM05D007954 ORTHO05D010124 1.1e-10 69.3 58 50.0
BcaB06g26987 Brassica carinata HOM05D007954 ORTHO05D010124 1.1e-10 69.3 58 50.0
BcaC03g15156 Brassica carinata HOM05D007954 ORTHO05D010124 1.1e-10 69.3 58 50.0
BolC2t08789H Brassica oleracea HOM05D007954 ORTHO05D010124 1.1e-10 69.3 58 50.0
A02p16350 Brassica napus HOM05D007954 ORTHO05D010124 1.5e-10 68.9 58 48.3
BraA02t06693Z Brassica rapa HOM05D007954 ORTHO05D010124 1.5e-10 68.9 58 48.3
AT3G60700 Arabidopsis thaliana HOM05D007954 ORTHO05D010124 4.3e-10 67.4 57 50.9
Carub.0002s1680 Capsella rubella HOM05D007954 ORTHO05D010124 5.6e-10 67.0 57 49.1
Carub.0007s0174 Capsella rubella HOM05D007954 ORTHO05D010124 3.1e-08 61.2 58 46.6
AL2G29280 Arabidopsis lyrata HOM05D007954 ORTHO05D010124 5.2e-08 60.5 47 51.1
CARHR063140 Cardamine hirsuta HOM05D007954 ORTHO05D010124 8.9e-08 59.7 57 42.1
THA.LOC104822072 Tarenaya hassleriana HOM05D007954 ORTHO05D010124 8.9e-08 59.7 60 43.3
CARHR063150 Cardamine hirsuta HOM05D007954 ORTHO05D010124 2.0e-07 58.5 57 45.6
BcaB03g14778 Brassica carinata HOM05D007954 ORTHO05D010124 4.4e-07 57.4 40 60.0
AL7G12050 Arabidopsis lyrata HOM05D007954 ORTHO05D080602 7.6e-07 56.6 53 47.2
BcaC09g51050 Brassica carinata HOM05D007954 ORTHO05D010124 3.7e-06 54.3 45 46.7
A01p14220 Brassica napus HOM05D007954 ORTHO05D010124 3.7e-06 54.3 45 46.7
C01p17490 Brassica napus HOM05D007954 ORTHO05D010124 3.7e-06 54.3 45 46.7
BolC1t01689H Brassica oleracea HOM05D007954 ORTHO05D010124 3.7e-06 54.3 45 46.7
BraA01t01369Z Brassica rapa HOM05D007954 ORTHO05D010124 3.7e-06 54.3 45 46.7
BcaNung01946 Brassica carinata HOM05D007954 ORTHO05D010124 6.4e-06 53.5 45 48.9


User provided reference genes

Program Settings