Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14992 Brassica carinata HOM05D010654 ORTHO05D013789 0.0e+00 1751.9 902 100.0
BraA02t06396Z Brassica rapa HOM05D010654 ORTHO05D013789 3.3e-122 443.7 886 39.4
BcaC08g45906 Brassica carinata HOM05D010654 ORTHO05D013789 3.1e-80 304.3 905 32.6
BcaC03g16427 Brassica carinata HOM05D010654 ORTHO05D013789 4.8e-73 280.4 872 31.8
BcaC07g37413 Brassica carinata HOM05D010654 ORTHO05D013789 9.1e-64 249.6 184 67.9
BolC1t03045H Brassica oleracea HOM05D010654 ORTHO05D013789 9.5e-29 133.3 146 52.1
BolC1t03046H Brassica oleracea HOM05D010654 ORTHO05D013789 8.9e-27 126.7 147 50.3
BolC3t15279H Brassica oleracea HOM05D010654 ORTHO05D013789 7.3e-21 107.1 256 36.7
A08p23680 Brassica napus HOM05D010654 ORTHO05D013789 2.6e-18 98.6 76 71.1
BcaB05g22272 Brassica carinata HOM05D010654 ORTHO05D013789 2.9e-17 95.1 299 32.8
BcaB05g22274 Brassica carinata HOM05D010654 ORTHO05D013789 1.4e-16 92.8 140 42.9
AL7G48730 Arabidopsis lyrata HOM05D010730 ORTHO05D013750 1.4e-11 76.3 143 37.1
Thhalv10029176m.g Eutrema salsugineum HOM05D010730 ORTHO05D013750 1.2e-10 73.2 171 32.2
Thhalv10000423m.g Eutrema salsugineum HOM05D010730 ORTHO05D013750 7.6e-10 70.5 128 35.2
A09p06440 Brassica napus HOM05D010654 ORTHO05D013789 6.4e-09 67.4 272 26.5
BolC7t43485H Brassica oleracea HOM05D010654 ORTHO05D013750 1.4e-08 66.2 83 34.9
AL5G12330 Arabidopsis lyrata HOM05D022930 ORTHO05D018462 1.9e-08 65.9 179 26.8
BraA07t30903Z Brassica rapa HOM05D010730 ORTHO05D013750 2.4e-08 65.5 85 40.0
BraA07t30433Z Brassica rapa HOM05D004566 ORTHO05D006041 3.2e-08 65.1 88 43.2
Aa31LG1G11980 Aethionema arabicum HOM05D005278 ORTHO05D006500 4.6e-07 61.2 258 25.6
BcaB02g11454 Brassica carinata HOM05D010730 ORTHO05D013750 7.9e-07 60.5 229 26.6
AL4G21670 Arabidopsis lyrata HOM05D022930 ORTHO05D013750 1.8e-06 59.3 57 43.9


User provided reference genes

Program Settings