Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14975 Brassica carinata HOM05D007344 ORTHO05D009010 8.4e-120 433.7 222 100.0
BcaC08g46679 Brassica carinata HOM05D007344 ORTHO05D009010 7.2e-103 377.5 223 88.8
C06p46550 Brassica napus HOM05D007344 ORTHO05D009010 7.2e-103 377.5 223 88.8
BolC6t39700H Brassica oleracea HOM05D007344 ORTHO05D009010 2.1e-102 375.9 221 88.7
BraA07t31405Z Brassica rapa HOM05D007344 ORTHO05D009010 2.3e-101 372.5 220 86.8
A07p38440 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-100 369.8 220 86.4
BcaC08g46678 Brassica carinata HOM05D007344 ORTHO05D009010 5.2e-69 265.0 215 67.0
C06p46540 Brassica napus HOM05D007344 ORTHO05D009010 5.2e-69 265.0 215 67.0
BolC6t39699H Brassica oleracea HOM05D007344 ORTHO05D009010 5.2e-69 265.0 215 67.0
A07p38420 Brassica napus HOM05D007344 ORTHO05D009010 8.3e-67 257.7 215 65.6
BraA07t31403Z Brassica rapa HOM05D007344 ORTHO05D009010 8.3e-67 257.7 215 65.6
C06p46590 Brassica napus HOM05D007344 ORTHO05D009010 2.5e-55 219.5 218 59.2
BolC6t39705H Brassica oleracea HOM05D007344 ORTHO05D009010 2.5e-55 219.5 218 59.2
BcaC08g46681 Brassica carinata HOM05D007344 ORTHO05D032082 2.0e-49 199.9 149 69.8
C06p46580 Brassica napus HOM05D007344 ORTHO05D032082 2.0e-49 199.9 149 69.8
Sp5g27360 Schrenkiella parvula HOM05D007344 ORTHO05D009010 2.0e-49 199.9 222 55.0
BolC6t39703H Brassica oleracea HOM05D007344 ORTHO05D032082 4.6e-49 198.7 144 72.2
Carub.0002s1910 Capsella rubella HOM05D007344 ORTHO05D009010 7.3e-47 191.4 223 53.8
BcaC03g15361 Brassica carinata HOM05D007344 ORTHO05D009010 6.2e-46 188.3 225 49.8
A02p17860 Brassica napus HOM05D007344 ORTHO05D009010 5.2e-45 185.3 225 50.2
BraA02t06836Z Brassica rapa HOM05D007344 ORTHO05D009010 5.2e-45 185.3 225 50.2
Thhalv10019095m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 8.9e-45 184.5 222 52.3
Carub.0002s1914 Capsella rubella HOM05D007344 ORTHO05D009010 4.4e-44 182.2 224 52.7
BolC2t09025H Brassica oleracea HOM05D007344 ORTHO05D009010 7.5e-44 181.4 220 51.4
AT1G72290 Arabidopsis thaliana HOM05D007344 ORTHO05D009010 3.7e-43 179.1 206 51.0
A02p17920 Brassica napus HOM05D007344 ORTHO05D009010 3.7e-43 179.1 220 50.9
BraA02t06839Z Brassica rapa HOM05D007344 ORTHO05D009010 3.7e-43 179.1 220 50.9
C02p29770 Brassica napus HOM05D007344 ORTHO05D009010 4.9e-43 178.7 220 50.9
BcaB05g24739 Brassica carinata HOM05D007344 ORTHO05D009010 1.1e-42 177.6 227 48.9
BcaC03g15366 Brassica carinata HOM05D007344 ORTHO05D009010 1.4e-42 177.2 225 48.9
C02p29750 Brassica napus HOM05D007344 ORTHO05D009010 1.4e-42 177.2 225 48.9
AL2G31960 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 4.6e-41 172.2 221 48.4
BcaB03g14972 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-41 171.8 221 49.8
BcaB03g14974 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-41 171.8 221 49.8
BcaB05g24743 Brassica carinata HOM05D007344 ORTHO05D009010 6.0e-41 171.8 221 48.9
Carub.0002s1909 Capsella rubella HOM05D007344 ORTHO05D009010 1.0e-40 171.0 223 49.8
BolC6t39693H Brassica oleracea HOM05D007344 ORTHO05D009010 1.3e-40 170.6 217 49.8
BcaC08g46676 Brassica carinata HOM05D007344 ORTHO05D009010 3.0e-40 169.5 217 49.3
C06p46460 Brassica napus HOM05D007344 ORTHO05D009010 3.0e-40 169.5 217 48.4
C06p46520 Brassica napus HOM05D007344 ORTHO05D009010 3.0e-40 169.5 217 49.3
BolC6t39697H Brassica oleracea HOM05D007344 ORTHO05D009010 3.9e-40 169.1 217 49.3
BcaB05g24740 Brassica carinata HOM05D007344 ORTHO05D009010 8.6e-40 167.9 221 48.9
A07p38410 Brassica napus HOM05D007344 ORTHO05D009010 1.1e-39 167.5 218 49.1
BraA07t31402Z Brassica rapa HOM05D007344 ORTHO05D009010 1.1e-39 167.5 218 49.1
BolC6t39698H Brassica oleracea HOM05D007344 ORTHO05D009010 1.9e-39 166.8 220 50.5
BcaB02g07012 Brassica carinata HOM05D007344 ORTHO05D009010 2.1e-38 163.3 219 47.5
BolC2t09022H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-37 161.0 212 46.7
BcaC03g15365 Brassica carinata HOM05D007344 ORTHO05D009010 5.2e-37 158.7 212 46.2
C02p29730 Brassica napus HOM05D007344 ORTHO05D009010 5.2e-37 158.7 212 46.2
BcaB03g14973 Brassica carinata HOM05D007344 ORTHO05D009010 6.8e-37 158.3 219 45.7
A02p17890 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-36 157.1 212 45.3
BraA02t06838Z Brassica rapa HOM05D007344 ORTHO05D009010 1.5e-36 157.1 212 45.3
CARHR065170 Cardamine hirsuta HOM05D007344 ORTHO05D009010 1.3e-35 154.1 221 43.9
BcaB05g24737 Brassica carinata HOM05D007344 ORTHO05D009010 1.7e-35 153.7 223 43.5
CARHR065180 Cardamine hirsuta HOM05D007344 ORTHO05D009010 3.7e-35 152.5 221 45.7
BolC6t39696H Brassica oleracea HOM05D007344 ORTHO05D009010 1.9e-34 150.2 202 46.0
BcaB05g24736 Brassica carinata HOM05D007344 ORTHO05D009010 2.4e-34 149.8 223 43.5
BcaB03g14976 Brassica carinata HOM05D007344 ORTHO05D009010 5.6e-31 138.7 223 43.9
BcaB03g14970 Brassica carinata HOM05D007344 ORTHO05D009010 1.2e-30 137.5 214 44.4
BolC2t09020H Brassica oleracea HOM05D007344 ORTHO05D009010 8.1e-30 134.8 187 44.9
Carub.0002s1912 Capsella rubella HOM05D007344 ORTHO05D009010 1.4e-29 134.0 223 45.3
BcaC08g46673 Brassica carinata HOM05D007344 ORTHO05D009010 5.2e-29 132.1 220 43.6
C06p46430 Brassica napus HOM05D007344 ORTHO05D009010 5.2e-29 132.1 220 43.6
BraA07t31400Z Brassica rapa HOM05D007344 ORTHO05D009010 2.0e-28 130.2 222 42.3
BcaC08g46677 Brassica carinata HOM05D007344 ORTHO05D009010 5.8e-28 128.6 210 44.3
CARHR065160 Cardamine hirsuta HOM05D007344 ORTHO05D009010 4.9e-27 125.6 224 41.1
AL2G31970 Arabidopsis lyrata HOM05D007344 ORTHO05D009010 2.3e-24 116.7 164 46.3
BolC6t39707H Brassica oleracea HOM05D007344 ORTHO05D009010 1.8e-21 107.1 214 38.3
C02p29790 Brassica napus HOM05D007344 ORTHO05D009010 2.6e-20 103.2 124 50.8
BcaC03g15367 Brassica carinata HOM05D007344 ORTHO05D009010 5.8e-20 102.1 124 50.8
BcaC08g46682 Brassica carinata HOM05D007344 ORTHO05D009010 5.4e-18 95.5 170 38.8
BcaC08g46684 Brassica carinata HOM05D007344 ORTHO05D032659 9.3e-18 94.7 207 37.2
C06p46640 Brassica napus HOM05D007344 ORTHO05D032659 9.3e-18 94.7 207 37.2
BolC6t39709H Brassica oleracea HOM05D007344 ORTHO05D032659 9.3e-18 94.7 207 37.2
C06p46530 Brassica napus HOM05D007344 ORTHO05D009010 6.6e-16 88.6 121 45.5
BolC6t39694H Brassica oleracea HOM05D007344 ORTHO05D009010 1.1e-15 87.8 225 33.3
A09p37590 Brassica napus HOM05D007344 ORTHO05D009010 3.3e-15 86.3 217 35.5
CARHR027960 Cardamine hirsuta HOM05D007344 ORTHO05D009010 9.6e-15 84.7 230 34.3
BraA09t39269Z Brassica rapa HOM05D007344 ORTHO05D009010 1.3e-14 84.3 217 35.0
BcaB07g32467 Brassica carinata HOM05D007344 ORTHO05D009010 1.6e-14 84.0 207 35.7
BolC6t39691H Brassica oleracea HOM05D007344 ORTHO05D009010 2.8e-14 83.2 217 34.6
BolC5t31464H Brassica oleracea HOM05D007344 ORTHO05D009010 6.2e-14 82.0 215 34.4
THA.LOC104813298 Tarenaya hassleriana HOM05D007344 ORTHO05D009010 6.2e-14 82.0 226 34.5
BcaC05g26866 Brassica carinata HOM05D007344 ORTHO05D009010 1.8e-13 80.5 215 34.4
C05p27460 Brassica napus HOM05D007344 ORTHO05D009010 9.0e-13 78.2 223 31.8
BcaC06g35373 Brassica carinata HOM05D007344 ORTHO05D009010 1.5e-12 77.4 165 33.3
C07p16850 Brassica napus HOM05D007344 ORTHO05D009010 1.5e-12 77.4 165 33.3
BolC7t42191H Brassica oleracea HOM05D007344 ORTHO05D009010 4.5e-12 75.9 165 32.7
A07p11180 Brassica napus HOM05D007344 ORTHO05D009010 7.6e-12 75.1 235 30.2
BraA07t28908Z Brassica rapa HOM05D007344 ORTHO05D009010 7.6e-12 75.1 235 30.2
Thhalv10009709m.g Eutrema salsugineum HOM05D007344 ORTHO05D009010 1.7e-11 73.9 175 36.6
THA.LOC104812190 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 2.1e-09 67.0 161 32.9
BcaC08g46675 Brassica carinata HOM05D007344 ORTHO05D009010 2.7e-09 66.6 86 47.7
C06p46510 Brassica napus HOM05D007344 ORTHO05D009010 2.7e-09 66.6 86 47.7
Aa31LG4G3590 Aethionema arabicum HOM05D000535 ORTHO05D009010 2.3e-08 63.5 202 32.2
C06p46470 Brassica napus HOM05D007344 ORTHO05D009010 3.9e-08 62.8 216 30.6
C06p46560 Brassica napus HOM05D007344 ORTHO05D041415 2.5e-07 60.1 75 52.0
BolC6t39701H Brassica oleracea HOM05D007344 ORTHO05D041415 2.5e-07 60.1 75 52.0
Aa31LG6G10970 Aethionema arabicum HOM05D007344 ORTHO05D009010 4.3e-07 59.3 225 28.9
BcaC08g46680 Brassica carinata HOM05D007344 ORTHO05D009010 4.3e-07 59.3 66 56.1
Thhalv10019129m.g Eutrema salsugineum HOM05D000535 ORTHO05D000427 4.3e-07 59.3 211 30.8
THA.LOC104814041 Tarenaya hassleriana HOM05D000535 ORTHO05D009010 1.3e-06 57.8 214 27.6
Aa31sc276G90 Aethionema arabicum HOM05D007344 ORTHO05D009010 2.1e-06 57.0 219 28.3
HanXRQChr16g0506311 Helianthus annuus HOM05D000535 ORTHO05D000427 4.8e-06 55.8 201 28.9
HanXRQChr16g0506331 Helianthus annuus HOM05D000535 ORTHO05D000427 4.8e-06 55.8 201 28.9


User provided reference genes

Program Settings