Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14951 Brassica carinata HOM05D009521 ORTHO05D013247 2.9e-76 288.5 147 100.0
BcaC08g43243 Brassica carinata HOM05D000003 ORTHO05D013247 6.3e-39 164.5 125 70.4
BcaB03g16558 Brassica carinata HOM05D000003 ORTHO05D000006 4.8e-31 138.3 113 65.5
BcaB07g29799 Brassica carinata HOM05D000496 ORTHO05D000411 5.9e-29 131.3 104 65.4
BcaNung04087 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-26 122.9 110 61.8
BraA03t10622Z Brassica rapa HOM05D009521 ORTHO05D013247 1.4e-25 120.2 113 59.3
BcaB05g21810 Brassica carinata HOM05D009521 ORTHO05D013247 1.4e-22 110.2 117 54.7
BolC8t50915H Brassica oleracea HOM05D009521 ORTHO05D013247 4.1e-22 108.6 111 55.9
BcaC03g14454 Brassica carinata HOM05D009521 ORTHO05D092480 8.6e-20 100.9 108 59.3
BolC8t47401H Brassica oleracea HOM05D009521 ORTHO05D013247 1.6e-18 96.7 98 54.1
BcaB06g26355 Brassica carinata HOM05D009521 ORTHO05D013247 4.0e-17 92.0 115 48.7
BcaC08g43434 Brassica carinata HOM05D009521 ORTHO05D013247 2.6e-16 89.4 97 53.6
C05p29730 Brassica napus HOM05D009521 ORTHO05D013247 1.8e-14 83.2 112 47.3
BolC6t35268H Brassica oleracea HOM05D009521 ORTHO05D013247 1.8e-14 83.2 104 51.0
BcaB04g17620 Brassica carinata HOM05D009521 ORTHO05D013247 5.4e-14 81.6 117 46.2
BcaNung02100 Brassica carinata HOM05D009521 ORTHO05D013247 4.5e-13 78.6 106 47.2
C08p02090 Brassica napus HOM05D009521 ORTHO05D013247 4.5e-13 78.6 103 46.6
BolC9t58563H Brassica oleracea HOM05D009521 ORTHO05D000411 7.8e-13 77.8 104 47.1
BolC7t46676H Brassica oleracea HOM05D009521 ORTHO05D013247 1.3e-12 77.0 86 57.0
BcaB08g35380 Brassica carinata HOM05D009521 ORTHO05D027438 3.3e-11 72.4 73 54.8
A06p43610 Brassica napus HOM05D009521 ORTHO05D039276 5.6e-11 71.6 97 51.5
BcaC08g45025 Brassica carinata HOM05D009521 ORTHO05D000411 4.7e-10 68.6 101 51.5
BraA10t43181Z Brassica rapa HOM05D009521 ORTHO05D016806 6.1e-10 68.2 98 48.0
BcaB04g17578 Brassica carinata HOM05D009521 ORTHO05D021670 1.0e-09 67.4 100 48.0
C02p64250 Brassica napus HOM05D009521 ORTHO05D039737 1.4e-09 67.0 94 54.3
BcaC02g12560 Brassica carinata HOM05D011474 ORTHO05D021753 5.2e-09 65.1 104 39.4
BcaC06g34152 Brassica carinata HOM05D000496 ORTHO05D000411 5.2e-09 65.1 104 39.4
C06p36790 Brassica napus HOM05D000385 ORTHO05D027499 6.8e-09 64.7 93 47.3
BcaC07g37007 Brassica carinata HOM05D000496 ORTHO05D021670 2.6e-08 62.8 98 42.9
BcaC04g23248 Brassica carinata HOM05D058839 ORTHO05D039755 5.8e-08 61.6 106 44.3
BcaC08g45878 Brassica carinata HOM05D000385 ORTHO05D027499 7.5e-08 61.2 93 45.2
BcaC07g38371 Brassica carinata HOM05D009521 ORTHO05D027438 9.8e-08 60.8 76 50.0
A10p14000 Brassica napus HOM05D011474 ORTHO05D021753 1.3e-07 60.5 100 42.0
BraA10t43491Z Brassica rapa HOM05D011474 ORTHO05D021753 1.3e-07 60.5 100 42.0
C09p33330 Brassica napus HOM05D000022 ORTHO05D016806 2.2e-07 59.7 43 72.1
BolC9t56170H Brassica oleracea HOM05D000022 ORTHO05D016806 2.2e-07 59.7 43 72.1
BcaB04g17526 Brassica carinata HOM05D009972 ORTHO05D012287 2.9e-07 59.3 88 44.3
BcaB01g03972 Brassica carinata HOM05D001608 ORTHO05D000411 8.3e-07 57.8 108 40.7
BcaC03g17293 Brassica carinata HOM05D009521 ORTHO05D039276 2.4e-06 56.2 93 44.1
BcaB03g13651 Brassica carinata HOM05D000003 ORTHO05D021670 4.1e-06 55.5 105 40.0
BraA04t16369Z Brassica rapa HOM05D000496 ORTHO05D108714 4.1e-06 55.5 90 36.7
BcaC02g09343 Brassica carinata HOM05D000003 ORTHO05D021670 7.0e-06 54.7 69 47.8
BolC6t38788H Brassica oleracea HOM05D000385 ORTHO05D027499 7.0e-06 54.7 84 44.0


User provided reference genes

Program Settings