Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14940 Brassica carinata HOM05D009671 ORTHO05D011859 5.0e-53 211.1 124 100.0
BcaB03g14934 Brassica carinata HOM05D009671 ORTHO05D011859 3.3e-41 171.8 131 81.7
BcaB03g15029 Brassica carinata HOM05D009671 ORTHO05D011859 1.3e-29 133.3 123 78.9
BcaC08g46736 Brassica carinata HOM05D009671 ORTHO05D011859 5.7e-25 117.9 113 77.9
AL2G31690 Arabidopsis lyrata HOM05D009671 ORTHO05D011859 1.5e-20 103.2 125 61.6
Carub.0002s1885 Capsella rubella HOM05D009671 ORTHO05D011859 2.5e-20 102.4 132 62.1
AT1G72070 Arabidopsis thaliana HOM05D009671 ORTHO05D011859 9.4e-20 100.5 125 64.8
CARHR064890 Cardamine hirsuta HOM05D009671 ORTHO05D011859 2.3e-18 95.9 125 61.6
Sp5g27130 Schrenkiella parvula HOM05D009671 ORTHO05D011859 2.3e-18 95.9 65 70.8
BolC6t39675H Brassica oleracea HOM05D009671 ORTHO05D011859 3.1e-15 85.5 95 74.7
A07p38220 Brassica napus HOM05D009671 ORTHO05D011859 4.1e-15 85.1 130 60.0
BraA07t31388Z Brassica rapa HOM05D009671 ORTHO05D011859 9.1e-15 84.0 95 73.7
BcaC08g46659 Brassica carinata HOM05D009671 ORTHO05D011859 2.7e-14 82.4 131 58.8
C06p46300 Brassica napus HOM05D009671 ORTHO05D011859 2.7e-14 82.4 95 72.6
THA.LOC104800125 Tarenaya hassleriana HOM05D009671 ORTHO05D011859 3.5e-14 82.0 132 52.3
Ah.05g178420 Amaranthus hybridus HOM05D009671 ORTHO05D011859 2.2e-08 62.8 108 50.9
Sc23g0001430 Simmondsia chinensis HOM05D009671 ORTHO05D011859 3.7e-08 62.0 130 37.7
PSO782G1016 Papaver somniferum HOM05D009671 ORTHO05D011859 6.3e-08 61.2 103 49.5
Thecc.08G187900 Theobroma cacao HOM05D009671 ORTHO05D011859 8.3e-08 60.8 101 39.6
EL10Ac1g00117 Beta vulgaris HOM05D009671 ORTHO05D011859 1.4e-07 60.1 111 45.0
MBI06_g17234_MAGBIO Magnolia biondii HOM05D009671 ORTHO05D011859 4.1e-07 58.5 106 43.4
Hund16784 Selenicereus undatus HOM05D009671 ORTHO05D003854 5.4e-07 58.2 118 35.6
Aqoxy6G00097 Aquilegia oxysepala HOM05D009671 ORTHO05D011859 9.2e-07 57.4 109 48.6
AUR62004618 Chenopodium quinoa HOM05D009671 ORTHO05D011859 9.2e-07 57.4 106 49.1
CDE02G4762 Ceratophyllum demersum HOM05D009671 ORTHO05D011859 2.0e-06 56.2 103 46.6


User provided reference genes

Program Settings