Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14894 Brassica carinata HOM05D002356 ORTHO05D002546 5.9e-60 234.2 134 100.0
BcaC08g46569 Brassica carinata HOM05D002356 ORTHO05D002546 1.4e-21 106.7 114 66.7
BolC6t39601H Brassica oleracea HOM05D002356 ORTHO05D002546 1.4e-21 106.7 114 66.7
AL2G31020 Arabidopsis lyrata HOM05D002356 ORTHO05D002546 7.1e-21 104.4 114 64.0
A07p37660 Brassica napus HOM05D002356 ORTHO05D002546 9.2e-21 104.0 114 65.8
C06p45430 Brassica napus HOM05D002356 ORTHO05D002546 2.7e-20 102.4 114 64.9
Carub.0002s1822 Capsella rubella HOM05D002356 ORTHO05D002546 1.9e-18 96.3 114 59.6
BcaB03g14895 Brassica carinata HOM05D002356 ORTHO05D002546 1.3e-14 83.6 114 57.9
CARHR023240 Cardamine hirsuta HOM05D002356 ORTHO05D002546 5.4e-13 78.2 114 47.4
THA.LOC104814484 Tarenaya hassleriana HOM05D002356 ORTHO05D002546 3.5e-12 75.5 114 42.1
BraA07t31330Z Brassica rapa HOM05D002356 ORTHO05D002546 4.6e-12 75.1 85 65.9
BraA09t39676Z Brassica rapa HOM05D002356 ORTHO05D002546 2.3e-11 72.8 116 40.5
BraA07t30714Z Brassica rapa HOM05D000575 ORTHO05D002546 3.0e-11 72.4 114 49.1
Aa31LG7G6880 Aethionema arabicum HOM05D002356 ORTHO05D002546 3.3e-10 68.9 118 42.4
BcaB07g32283 Brassica carinata HOM05D002356 ORTHO05D002546 7.3e-10 67.8 116 40.5
Sp5g26530 Schrenkiella parvula HOM05D002356 ORTHO05D002546 9.6e-10 67.4 48 81.2
Thhalv10018312m.g Eutrema salsugineum HOM05D002356 ORTHO05D002546 1.6e-09 66.6 51 74.5
BcaC05g26194 Brassica carinata HOM05D002356 ORTHO05D002546 4.7e-09 65.1 114 39.5
C05p21970 Brassica napus HOM05D002356 ORTHO05D002546 4.7e-09 65.1 114 39.5
BolC5t30893H Brassica oleracea HOM05D002356 ORTHO05D002546 4.7e-09 65.1 114 39.5
Carub.0001s2239 Capsella rubella HOM05D002356 ORTHO05D002546 1.4e-08 63.5 114 42.1
Sp1g20360 Schrenkiella parvula HOM05D002356 ORTHO05D002546 1.4e-08 63.5 114 43.0
Thhalv10006998m.g Eutrema salsugineum HOM05D002356 ORTHO05D002546 5.2e-08 61.6 114 41.2
CARHR064640 Cardamine hirsuta HOM05D002356 ORTHO05D002546 8.9e-08 60.8 51 68.6
A07p30770 Brassica napus HOM05D000575 ORTHO05D002546 2.6e-07 59.3 51 68.6
AT1G71360 Arabidopsis thaliana HOM05D002356 ORTHO05D002546 4.9e-06 55.1 51 64.7
BcaC08g45782 Brassica carinata HOM05D002356 ORTHO05D002546 6.4e-06 54.7 56 58.9


User provided reference genes

Program Settings