Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 6.9e-184 647.1 315 100.0
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 2.7e-172 608.6 326 92.6
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 1.7e-105 386.7 318 66.0
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 5.2e-99 365.2 318 61.3
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 8.3e-89 331.3 330 53.9
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 1.6e-84 317.0 278 59.4
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 1.1e-80 304.3 269 60.2
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 3.5e-79 299.3 240 63.3
BcaB06g28540 Brassica carinata HOM05D008384 ORTHO05D009842 1.3e-65 254.2 208 63.0
BcaB06g28198 Brassica carinata HOM05D008384 ORTHO05D009842 6.7e-54 215.3 187 61.0
BolC7t44105H Brassica oleracea HOM05D008384 ORTHO05D016044 4.0e-51 206.1 198 57.1
BolC9t55138H Brassica oleracea HOM05D008384 ORTHO05D016044 3.4e-50 203.0 165 62.4
C01p40360 Brassica napus HOM05D008384 ORTHO05D009842 1.0e-49 201.4 143 63.6
C06p27660 Brassica napus HOM05D008384 ORTHO05D009842 1.0e-49 201.4 148 70.9
BcaC04g22193 Brassica carinata HOM05D008384 ORTHO05D016044 2.2e-49 200.3 165 61.2
BraA03t11732Z Brassica rapa HOM05D008384 ORTHO05D016044 2.8e-44 183.3 173 56.6
C05p42740 Brassica napus HOM05D008384 ORTHO05D009842 3.4e-42 176.4 159 64.2
BolC9t59717H Brassica oleracea HOM05D008384 ORTHO05D016044 2.9e-41 173.3 110 74.5
BolC5t33000H Brassica oleracea HOM05D008384 ORTHO05D009842 6.3e-36 155.6 145 63.4
BcaC06g33887 Brassica carinata HOM05D008384 ORTHO05D016044 5.9e-34 149.1 136 60.3
C03p24860 Brassica napus HOM05D008384 ORTHO05D009842 4.2e-32 142.9 181 39.8
BolC7t44107H Brassica oleracea HOM05D008384 ORTHO05D016044 3.3e-29 133.3 128 58.6
BolC1t03992H Brassica oleracea HOM05D008384 ORTHO05D009842 9.7e-29 131.7 96 61.5
C09p69740 Brassica napus HOM05D008384 ORTHO05D016044 4.8e-28 129.4 88 72.7
C03p32500 Brassica napus HOM05D008384 ORTHO05D009842 1.2e-26 124.8 93 65.6
BcaB06g27189 Brassica carinata HOM05D066470 ORTHO05D009842 1.3e-25 121.3 109 52.3
BolC7t41062H Brassica oleracea HOM05D008384 ORTHO05D009842 6.5e-25 119.0 104 51.9
BcaC01g04902 Brassica carinata HOM05D008384 ORTHO05D009842 1.9e-24 117.5 158 42.4
BolC6t37937H Brassica oleracea HOM05D008384 ORTHO05D009842 1.9e-24 117.5 104 64.4
BraA04t16529Z Brassica rapa HOM05D015892 ORTHO05D009842 7.2e-24 115.5 359 27.3
BcaB05g23720 Brassica carinata HOM05D008384 ORTHO05D009842 3.9e-22 109.8 97 49.5
BolC2t10222H Brassica oleracea HOM05D008384 ORTHO05D009842 3.9e-22 109.8 116 45.7
C04p42370 Brassica napus HOM05D015892 ORTHO05D009842 2.6e-21 107.1 351 25.6
BcaC01g03468 Brassica carinata HOM05D008384 ORTHO05D009842 4.4e-21 106.3 129 42.6
C03p31500 Brassica napus HOM05D015892 ORTHO05D009842 2.8e-20 103.6 263 29.3
C06p00830 Brassica napus HOM05D008384 ORTHO05D009842 9.1e-19 98.6 106 42.5
BcaC09g51574 Brassica carinata HOM05D008384 ORTHO05D016044 4.5e-18 96.3 100 54.0
C07p60290 Brassica napus HOM05D015892 ORTHO05D009842 4.5e-18 96.3 103 43.7
BcaB07g33986 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-17 95.1 211 30.8
BcaC01g04977 Brassica carinata HOM05D015892 ORTHO05D009842 8.5e-17 92.0 274 28.5
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 7.2e-16 89.0 162 29.0
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 7.2e-16 89.0 117 34.2
SpUn0001_0070 Schrenkiella parvula HOM05D008384 ORTHO05D009842 7.2e-16 89.0 203 30.0
BcaC03g14591 Brassica carinata HOM05D008384 ORTHO05D009842 1.2e-15 88.2 110 40.9
C09p31540 Brassica napus HOM05D008384 ORTHO05D042359 1.2e-15 88.2 288 29.2
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 1.6e-15 87.8 213 27.7
BolC2t11345H Brassica oleracea HOM05D008384 ORTHO05D009842 1.6e-15 87.8 148 35.8
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 2.1e-15 87.4 109 33.9
BcaB02g06502 Brassica carinata HOM05D000480 ORTHO05D000313 4.7e-15 86.3 140 40.0
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 1.0e-14 85.1 120 32.5
BcaB01g04152 Brassica carinata HOM05D008384 ORTHO05D009842 1.0e-14 85.1 62 69.4
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 1.4e-14 84.7 168 32.7
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 1.8e-14 84.3 109 33.0
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 2.3e-14 84.0 117 38.5
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 4.0e-14 83.2 109 33.0
C09p30140 Brassica napus HOM05D005627 ORTHO05D042654 6.7e-14 82.4 109 30.3
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 1.5e-13 81.3 168 30.4
C03p32490 Brassica napus HOM05D008384 ORTHO05D009842 2.0e-13 80.9 55 65.5
BcaB07g33633 Brassica carinata HOM05D008384 ORTHO05D009842 2.6e-13 80.5 113 34.5
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 5.7e-13 79.3 224 26.8
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 5.7e-13 79.3 160 28.1
BcaB07g33659 Brassica carinata HOM05D008384 ORTHO05D009842 5.7e-13 79.3 194 27.3
BcaB07g33832 Brassica carinata HOM05D008384 ORTHO05D009842 9.7e-13 78.6 142 33.8
BolC2t11294H Brassica oleracea HOM05D006289 ORTHO05D002086 9.7e-13 78.6 95 37.9
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 1.3e-12 78.2 160 27.5
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 2.2e-12 77.4 300 26.0
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 2.2e-12 77.4 300 26.0
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 2.8e-12 77.0 149 28.9
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 3.7e-12 76.6 93 37.6
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 4.8e-12 76.3 102 35.3
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 4.8e-12 76.3 168 28.0
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 4.8e-12 76.3 225 27.1
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 4.8e-12 76.3 106 32.1
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 6.3e-12 75.9 111 32.4
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 8.2e-12 75.5 218 25.7
BolC7t41685H Brassica oleracea HOM05D005627 ORTHO05D011976 8.2e-12 75.5 117 31.6
BcaB08g34625 Brassica carinata HOM05D008384 ORTHO05D009842 1.1e-11 75.1 137 31.4
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 1.4e-11 74.7 102 36.3
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 1.4e-11 74.7 212 25.9
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.8e-11 74.3 166 28.3
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 2.4e-11 73.9 112 31.2
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 2.4e-11 73.9 112 31.2
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 2.4e-11 73.9 161 27.3
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 3.1e-11 73.6 212 25.5
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 3.1e-11 73.6 93 36.6
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 9.1e-11 72.0 112 30.4
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 9.1e-11 72.0 186 23.7
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 9.1e-11 72.0 112 30.4
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 1.2e-10 71.6 92 34.8
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.6e-10 71.2 102 35.3
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 2.0e-10 70.9 111 30.6
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 2.0e-10 70.9 136 27.2
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 2.0e-10 70.9 136 27.2
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 2.0e-10 70.9 136 27.2
C06p26260 Brassica napus HOM05D008384 ORTHO05D098484 2.7e-10 70.5 75 52.0
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 3.5e-10 70.1 92 34.8
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 4.5e-10 69.7 121 29.8
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 4.5e-10 69.7 92 33.7
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 4.5e-10 69.7 112 29.5
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 4.5e-10 69.7 160 26.2
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 4.5e-10 69.7 112 29.5
BcaB04g18138 Brassica carinata HOM05D005627 ORTHO05D013519 5.9e-10 69.3 101 32.7
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 5.9e-10 69.3 102 34.3
AL1G51920 Arabidopsis lyrata HOM05D024522 ORTHO05D023612 7.7e-10 68.9 122 29.5
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 7.7e-10 68.9 111 29.7
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 1.0e-09 68.6 95 34.7
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 1.3e-09 68.2 184 26.6
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-09 68.2 112 31.2
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-09 68.2 95 31.6
C06p06910 Brassica napus HOM05D005627 ORTHO05D013519 1.3e-09 68.2 100 33.0
BcaC04g20562 Brassica carinata HOM05D006289 ORTHO05D016037 2.2e-09 67.4 89 33.7
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 2.2e-09 67.4 102 34.3
Sp4g09860 Schrenkiella parvula HOM05D005627 ORTHO05D011792 2.2e-09 67.4 87 35.6
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 2.9e-09 67.0 103 31.1
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 2.9e-09 67.0 206 24.8
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 2.9e-09 67.0 108 30.6
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 2.9e-09 67.0 108 30.6
BolC7t44672H Brassica oleracea HOM05D024522 ORTHO05D023612 2.9e-09 67.0 174 26.4
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 2.9e-09 67.0 95 31.6
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 5.0e-09 66.2 111 28.8
BcaB08g35559 Brassica carinata HOM05D008384 ORTHO05D094156 6.5e-09 65.9 96 44.8
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 6.5e-09 65.9 98 30.6
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 6.5e-09 65.9 98 30.6
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 6.5e-09 65.9 112 26.8
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 6.5e-09 65.9 112 26.8
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 8.5e-09 65.5 110 29.1
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 8.5e-09 65.5 106 29.2
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 1.1e-08 65.1 98 29.6
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 1.5e-08 64.7 108 28.7
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 1.9e-08 64.3 95 30.5
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 1.9e-08 64.3 95 30.5
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 1.9e-08 64.3 112 27.7
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 3.2e-08 63.5 92 30.4
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 3.2e-08 63.5 106 28.3
A07p06840 Brassica napus HOM05D008384 ORTHO05D009842 3.2e-08 63.5 119 30.3
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 3.2e-08 63.5 106 28.3
BolC1t03303H Brassica oleracea HOM05D009590 ORTHO05D014118 3.2e-08 63.5 114 33.3
BraA01t02884Z Brassica rapa HOM05D015892 ORTHO05D009842 4.2e-08 63.2 60 46.7
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 5.5e-08 62.8 106 29.2
BcaC05g24567 Brassica carinata HOM05D008384 ORTHO05D009842 7.2e-08 62.4 39 66.7
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 9.4e-08 62.0 194 22.2
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 9.4e-08 62.0 95 30.5
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 9.4e-08 62.0 108 25.9
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 9.4e-08 62.0 108 25.9
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 1.2e-07 61.6 75 36.0
C09p37890 Brassica napus HOM05D013280 ORTHO05D011792 1.6e-07 61.2 89 28.1
BolC6t38917H Brassica oleracea HOM05D005627 ORTHO05D013519 1.6e-07 61.2 74 33.8
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 2.1e-07 60.8 96 30.2
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 2.1e-07 60.8 96 30.2
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 2.1e-07 60.8 96 30.2
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 2.1e-07 60.8 279 22.6
BcaB02g10725 Brassica carinata HOM05D000106 ORTHO05D000160 2.7e-07 60.5 151 35.8
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 3.6e-07 60.1 95 28.4
C01p10680 Brassica napus HOM05D005627 ORTHO05D011792 3.6e-07 60.1 63 34.9
BcaB01g06169 Brassica carinata HOM05D008384 ORTHO05D039137 4.7e-07 59.7 92 43.5
A06p22330 Brassica napus HOM05D005627 ORTHO05D011976 4.7e-07 59.7 119 28.6
C03p01000 Brassica napus HOM05D008384 ORTHO05D039137 4.7e-07 59.7 87 44.8
BolC7t41649H Brassica oleracea HOM05D005627 ORTHO05D027884 6.1e-07 59.3 98 28.6
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 6.1e-07 59.3 88 31.8
AL1G46390 Arabidopsis lyrata HOM05D024522 ORTHO05D023612 8.0e-07 58.9 130 26.9
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 8.0e-07 58.9 106 30.2
BcaB01g04195 Brassica carinata HOM05D009418 ORTHO05D018626 1.0e-06 58.5 194 26.3
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 1.0e-06 58.5 96 29.2
BolC9t55516H Brassica oleracea HOM05D005627 ORTHO05D013519 1.0e-06 58.5 75 33.3
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 1.4e-06 58.2 103 30.1
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 1.8e-06 57.8 194 22.7
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 1.8e-06 57.8 111 29.7
A09p06670 Brassica napus HOM05D006289 ORTHO05D009842 1.8e-06 57.8 95 26.3
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 1.8e-06 57.8 109 30.3
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 2.3e-06 57.4 95 28.4
BolC5t30494H Brassica oleracea HOM05D006289 ORTHO05D009842 3.0e-06 57.0 95 27.4
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 4.0e-06 56.6 120 30.8
BolC7t41687H Brassica oleracea HOM05D005627 ORTHO05D013519 4.0e-06 56.6 64 35.9


User provided reference genes

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