Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14832 Brassica carinata HOM05D000830 ORTHO05D090918 5.2e-66 254.2 126 100.0
BcaB03g12180 Brassica carinata HOM05D000830 ORTHO05D006613 2.9e-16 89.0 57 84.2
BraA09t39186Z Brassica rapa HOM05D000830 ORTHO05D006613 1.2e-14 83.6 80 63.8
A09p36670 Brassica napus HOM05D000830 ORTHO05D006613 2.7e-14 82.4 80 62.5
BolC3t19878H Brassica oleracea HOM05D000830 ORTHO05D006613 3.5e-14 82.0 54 81.5
Thhalv10010017m.g Eutrema salsugineum HOM05D000830 ORTHO05D006613 3.5e-14 82.0 79 62.0
BcaC05g26994 Brassica carinata HOM05D000830 ORTHO05D006613 4.6e-14 81.6 80 61.2
A08p24830 Brassica napus HOM05D000830 ORTHO05D006613 4.6e-14 81.6 80 60.0
C05p28540 Brassica napus HOM05D000830 ORTHO05D006613 4.6e-14 81.6 80 61.2
BolC5t31578H Brassica oleracea HOM05D000830 ORTHO05D006613 4.6e-14 81.6 80 61.2
BraA08t34438Z Brassica rapa HOM05D000830 ORTHO05D006613 4.6e-14 81.6 80 60.0
BcaB07g32566 Brassica carinata HOM05D000830 ORTHO05D006613 3.0e-13 79.0 57 78.9
C03p76220 Brassica napus HOM05D000830 ORTHO05D006613 3.0e-13 79.0 54 79.6
CARHR029170 Cardamine hirsuta HOM05D000830 ORTHO05D006613 3.9e-13 78.6 57 78.9
AT1G29790 Arabidopsis thaliana HOM05D000830 ORTHO05D006613 5.1e-13 78.2 57 78.9
Sp1g25690 Schrenkiella parvula HOM05D000830 ORTHO05D006613 5.1e-13 78.2 79 60.8
AL1G43630 Arabidopsis lyrata HOM05D000830 ORTHO05D006613 1.1e-12 77.0 57 77.2
Carub.0001s2804 Capsella rubella HOM05D000830 ORTHO05D006613 2.5e-12 75.9 57 75.4
Aa31LG6G5830 Aethionema arabicum HOM05D000830 ORTHO05D006613 1.4e-10 70.1 79 58.2
EL10Ac8g19777 Beta vulgaris HOM05D000830 ORTHO05D006613 1.4e-10 70.1 80 55.0
Cpa.g.sc17.102 Carica papaya HOM05D000830 ORTHO05D006613 1.5e-09 66.6 68 58.8
Hund21492 Selenicereus undatus HOM05D000830 ORTHO05D006613 4.5e-09 65.1 60 60.0
THA.LOC104820635 Tarenaya hassleriana HOM05D000830 ORTHO05D006613 5.8e-09 64.7 57 70.2
THA.LOC104812658 Tarenaya hassleriana HOM05D000830 ORTHO05D006613 2.2e-08 62.8 60 63.3
Atru.chr10.1369 Acer truncatum HOM05D000830 ORTHO05D006613 4.2e-07 58.5 70 52.9
FAN16G0222 Fragaria x ananassa HOM05D000830 ORTHO05D006613 7.1e-07 57.8 60 58.3
RcHm_v2.0_Chr5g0013071 Rosa chinensis HOM05D000830 ORTHO05D006613 1.6e-06 56.6 56 62.5
MD16G1203100 Malus domestica HOM05D000830 ORTHO05D006613 2.1e-06 56.2 56 58.9
Prupe.4G075100 Prunus persica HOM05D000830 ORTHO05D006613 2.1e-06 56.2 68 51.5
AUR62027572 Chenopodium quinoa HOM05D000830 ORTHO05D006613 2.7e-06 55.8 98 44.9
AUR62035787 Chenopodium quinoa HOM05D000830 ORTHO05D006613 2.7e-06 55.8 98 45.9
ClCG03G007110 Citrullus lanatus HOM05D000830 ORTHO05D006613 2.7e-06 55.8 56 60.7
MELO3C002713.2 Cucumis melo HOM05D000830 ORTHO05D006613 2.7e-06 55.8 56 60.7
CsaV3_1G032690 Cucumis sativus L. HOM05D000830 ORTHO05D006613 2.7e-06 55.8 56 60.7
Sed0008052 Sechium edule HOM05D000830 ORTHO05D006613 2.7e-06 55.8 56 60.7
Hund17839 Selenicereus undatus HOM05D000830 ORTHO05D006613 2.7e-06 55.8 67 52.2
FAN25G3405 Fragaria x ananassa HOM05D000830 ORTHO05D006613 3.5e-06 55.5 53 62.3
Peaxi162Scf00482g00411 Petunia axillaris HOM05D000830 ORTHO05D006613 3.5e-06 55.5 53 62.3
Duzib101G0005 Durio zibethinus HOM05D000830 ORTHO05D006613 7.9e-06 54.3 68 52.9
MD05G1290600 Malus domestica HOM05D000830 ORTHO05D006613 7.9e-06 54.3 56 58.9
Psat7g092560 Pisum sativum HOM05D000830 ORTHO05D006613 7.9e-06 54.3 60 58.3


User provided reference genes

Program Settings