Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14785 Brassica carinata HOM05D006289 ORTHO05D009842 1.4e-223 779.2 392 100.0
A05p13630 Brassica napus HOM05D006289 ORTHO05D027692 6.4e-38 162.5 293 38.9
BraA05t20302Z Brassica rapa HOM05D006289 ORTHO05D027692 3.5e-36 156.8 256 39.8
A01p24510 Brassica napus HOM05D006289 ORTHO05D016037 1.6e-33 147.9 325 31.1
BraA03t09393Z Brassica rapa HOM05D006289 ORTHO05D016037 8.1e-33 145.6 420 29.5
A09p34760 Brassica napus HOM05D006289 ORTHO05D009842 6.8e-32 142.5 394 30.5
BraA04t16495Z Brassica rapa HOM05D006289 ORTHO05D016037 1.2e-31 141.7 376 30.6
A02p27270 Brassica napus HOM05D006289 ORTHO05D040814 2.9e-30 137.1 412 26.0
BraA02t07752Z Brassica rapa HOM05D006289 ORTHO05D040814 2.9e-30 137.1 412 26.0
BraA07t28814Z Brassica rapa HOM05D006289 ORTHO05D009842 3.8e-30 136.7 394 29.9
C07p15540 Brassica napus HOM05D006289 ORTHO05D016037 1.9e-29 134.4 413 28.3
BolC8t48148H Brassica oleracea HOM05D006289 ORTHO05D033772 1.9e-29 134.4 379 27.7
A02p12540 Brassica napus HOM05D006289 ORTHO05D009842 5.4e-29 132.9 282 30.1
BraA10t43450Z Brassica rapa HOM05D006289 ORTHO05D009842 5.4e-29 132.9 282 30.1
A05p27900 Brassica napus HOM05D006289 ORTHO05D009842 6.0e-28 129.4 383 27.4
C02p24040 Brassica napus HOM05D006289 ORTHO05D009842 1.3e-27 128.3 341 29.6
C07p21860 Brassica napus HOM05D006289 ORTHO05D009842 1.7e-27 127.9 147 40.8
BraA06t25337Z Brassica rapa HOM05D006289 ORTHO05D009842 2.3e-27 127.5 379 26.6
A05p28230 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-26 125.2 147 41.5
BraA05t21704Z Brassica rapa HOM05D006289 ORTHO05D009842 1.1e-26 125.2 147 41.5
BcaNung00230 Brassica carinata HOM05D006289 ORTHO05D027553 1.5e-26 124.8 415 27.2
BcaB04g18139 Brassica carinata HOM05D006289 ORTHO05D009842 3.3e-26 123.6 298 30.2
BraA05t21307Z Brassica rapa HOM05D006289 ORTHO05D009842 5.6e-26 122.9 147 40.1
BcaB01g00831 Brassica carinata HOM05D005627 ORTHO05D009842 9.6e-26 122.1 391 29.9
A01p23190 Brassica napus HOM05D006289 ORTHO05D033772 3.6e-25 120.2 396 25.3
A07p02750 Brassica napus HOM05D006289 ORTHO05D009842 3.6e-25 120.2 249 30.1
BraA01t02228Z Brassica rapa HOM05D006289 ORTHO05D033772 3.6e-25 120.2 396 25.3
BcaB06g28130 Brassica carinata HOM05D006289 ORTHO05D016037 1.1e-24 118.6 136 42.6
C01p21290 Brassica napus HOM05D006289 ORTHO05D009842 1.1e-24 118.6 286 28.3
BcaB02g10844 Brassica carinata HOM05D006289 ORTHO05D016037 1.8e-24 117.9 163 39.9
A09p28360 Brassica napus HOM05D006289 ORTHO05D027118 1.8e-24 117.9 147 40.1
BolC7t42041H Brassica oleracea HOM05D006289 ORTHO05D016037 5.2e-24 116.3 144 38.9
BcaC09g49041 Brassica carinata HOM05D006289 ORTHO05D032439 6.9e-24 115.9 350 28.9
A05p20430 Brassica napus HOM05D006289 ORTHO05D009842 9.9e-23 112.1 269 27.9
BcaB04g19296 Brassica carinata HOM05D006289 ORTHO05D017564 1.9e-21 107.8 172 36.0
BcaC06g35485 Brassica carinata HOM05D006289 ORTHO05D016037 1.9e-21 107.8 385 27.3
C09p39660 Brassica napus HOM05D006289 ORTHO05D027118 1.9e-21 107.8 105 44.8
BolC9t56845H Brassica oleracea HOM05D006289 ORTHO05D027118 1.9e-21 107.8 105 44.8
A02p36990 Brassica napus HOM05D000042 ORTHO05D033718 1.6e-20 104.8 367 27.0
A04p16270 Brassica napus HOM05D006289 ORTHO05D019882 1.6e-20 104.8 342 29.5
BcaB08g34566 Brassica carinata HOM05D005627 ORTHO05D009842 2.1e-20 104.4 170 33.5
BolC7t41624H Brassica oleracea HOM05D006289 ORTHO05D027553 2.1e-20 104.4 387 27.1
C05p37190 Brassica napus HOM05D005627 ORTHO05D024275 3.5e-20 103.6 134 39.6
BraA05t20010Z Brassica rapa HOM05D006289 ORTHO05D028190 4.6e-20 103.2 149 40.3
BcaB05g23251 Brassica carinata HOM05D005627 ORTHO05D009842 6.0e-20 102.8 191 32.5
BraA02t08686Z Brassica rapa HOM05D000042 ORTHO05D033718 6.0e-20 102.8 367 26.7
BcaC04g19885 Brassica carinata HOM05D005627 ORTHO05D017564 7.8e-20 102.4 168 36.9
BcaC05g27035 Brassica carinata HOM05D006289 ORTHO05D032057 3.0e-19 100.5 150 40.0
C05p28920 Brassica napus HOM05D006289 ORTHO05D032057 3.0e-19 100.5 150 40.0
BolC5t31614H Brassica oleracea HOM05D006289 ORTHO05D032057 3.0e-19 100.5 150 40.0
BcaB04g18536 Brassica carinata HOM05D005627 ORTHO05D009842 3.9e-19 100.1 144 38.9
BcaC04g21092 Brassica carinata HOM05D005627 ORTHO05D031749 5.1e-19 99.8 164 36.6
C09p35790 Brassica napus HOM05D005627 ORTHO05D031749 5.1e-19 99.8 164 36.6
BolC9t56413H Brassica oleracea HOM05D005627 ORTHO05D031749 5.1e-19 99.8 164 36.6
BraA07t28074Z Brassica rapa HOM05D006289 ORTHO05D009842 5.1e-19 99.8 360 25.0
BcaB08g34781 Brassica carinata HOM05D005627 ORTHO05D009842 1.1e-18 98.6 111 40.5
BcaB03g16259 Brassica carinata HOM05D005627 ORTHO05D021730 1.9e-18 97.8 240 31.2
BcaC04g20743 Brassica carinata HOM05D006289 ORTHO05D027118 1.9e-18 97.8 90 45.6
BcaB04g19628 Brassica carinata HOM05D005627 ORTHO05D017564 3.3e-18 97.1 145 34.5
C09p42080 Brassica napus HOM05D006289 ORTHO05D016037 4.3e-18 96.7 247 30.0
BraA04t17266Z Brassica rapa HOM05D006289 ORTHO05D019882 4.3e-18 96.7 202 33.7
BcaC08g47004 Brassica carinata HOM05D005627 ORTHO05D019933 5.6e-18 96.3 166 32.5
BolC3t18952H Brassica oleracea HOM05D006289 ORTHO05D017568 5.6e-18 96.3 146 34.9
A10p07450 Brassica napus HOM05D006289 ORTHO05D009842 7.3e-18 95.9 403 27.0
BraA05t20012Z Brassica rapa HOM05D005627 ORTHO05D021730 7.3e-18 95.9 225 32.9
C09p12390 Brassica napus HOM05D005627 ORTHO05D032198 1.3e-17 95.1 168 33.9
BcaB01g01204 Brassica carinata HOM05D006289 ORTHO05D019882 1.6e-17 94.7 129 38.8
A05p23770 Brassica napus HOM05D006289 ORTHO05D042070 1.6e-17 94.7 113 39.8
BraA05t21247Z Brassica rapa HOM05D006289 ORTHO05D042070 1.6e-17 94.7 113 39.8
BraA08t32951Z Brassica rapa HOM05D006289 ORTHO05D019882 1.6e-17 94.7 148 39.2
BcaC04g19240 Brassica carinata HOM05D006289 ORTHO05D017568 2.1e-17 94.4 150 35.3
BcaB01g00118 Brassica carinata HOM05D005627 ORTHO05D009842 3.6e-17 93.6 170 30.0
A09p28380 Brassica napus HOM05D005627 ORTHO05D021730 3.6e-17 93.6 147 36.1
BcaC05g27033 Brassica carinata HOM05D005627 ORTHO05D031886 6.2e-17 92.8 170 30.0
C05p28910 Brassica napus HOM05D005627 ORTHO05D031886 6.2e-17 92.8 170 30.0
BolC5t31612H Brassica oleracea HOM05D005627 ORTHO05D031886 6.2e-17 92.8 170 30.0
BcaB04g17888 Brassica carinata HOM05D005627 ORTHO05D017568 8.1e-17 92.4 113 38.9
A08p09530 Brassica napus HOM05D006289 ORTHO05D019882 8.1e-17 92.4 79 51.9
BcaB01g01613 Brassica carinata HOM05D006289 ORTHO05D009842 1.1e-16 92.0 160 34.4
BcaB03g16579 Brassica carinata HOM05D006289 ORTHO05D019933 1.4e-16 91.7 131 35.1
BcaB07g30175 Brassica carinata HOM05D005627 ORTHO05D019933 1.4e-16 91.7 131 35.1
C09p39670 Brassica napus HOM05D005627 ORTHO05D021730 1.8e-16 91.3 147 34.7
BolC9t56847H Brassica oleracea HOM05D005627 ORTHO05D021730 1.8e-16 91.3 147 34.7
C01p43410 Brassica napus HOM05D006289 ORTHO05D017568 2.4e-16 90.9 146 32.9
C03p66840 Brassica napus HOM05D006289 ORTHO05D017568 3.1e-16 90.5 243 28.8
BcaC03g16702 Brassica carinata HOM05D006289 ORTHO05D039115 9.0e-16 89.0 146 32.2
BraA02t08906Z Brassica rapa HOM05D005627 ORTHO05D019933 9.0e-16 89.0 179 30.2
BolC9t59378H Brassica oleracea HOM05D006289 ORTHO05D017568 1.5e-15 88.2 150 34.7
C02p52110 Brassica napus HOM05D005627 ORTHO05D040212 2.6e-15 87.4 111 40.5
BolC2t11295H Brassica oleracea HOM05D005627 ORTHO05D040212 2.6e-15 87.4 111 40.5
BcaC01g03482 Brassica carinata HOM05D006289 ORTHO05D032299 4.5e-15 86.7 205 31.7
BcaB01g01914 Brassica carinata HOM05D005627 ORTHO05D009842 5.8e-15 86.3 258 29.1
C01p11540 Brassica napus HOM05D005627 ORTHO05D009842 5.8e-15 86.3 94 44.7
C02p45490 Brassica napus HOM05D006289 ORTHO05D039115 7.6e-15 85.9 165 32.7
BolC2t10570H Brassica oleracea HOM05D006289 ORTHO05D040995 9.9e-15 85.5 105 37.1
A04p11360 Brassica napus HOM05D005627 ORTHO05D019933 1.3e-14 85.1 179 29.6
BraA04t16798Z Brassica rapa HOM05D005627 ORTHO05D019933 1.3e-14 85.1 179 29.6
BraA01t02126Z Brassica rapa HOM05D005627 ORTHO05D021730 1.7e-14 84.7 124 37.9
BcaC06g36127 Brassica carinata HOM05D013280 ORTHO05D011792 2.9e-14 84.0 146 32.2
BcaC02g11662 Brassica carinata HOM05D005627 ORTHO05D011792 3.8e-14 83.6 174 28.7
BcaC09g49023 Brassica carinata HOM05D006289 ORTHO05D018698 3.8e-14 83.6 176 33.0
C03p74240 Brassica napus HOM05D006289 ORTHO05D028190 4.9e-14 83.2 128 36.7
BolC3t19682H Brassica oleracea HOM05D006289 ORTHO05D028190 4.9e-14 83.2 128 36.7
C04p12610 Brassica napus HOM05D005627 ORTHO05D011792 6.4e-14 82.8 146 31.5
C08p09320 Brassica napus HOM05D006289 ORTHO05D017568 8.4e-14 82.4 90 40.0
BcaC06g34913 Brassica carinata HOM05D006289 ORTHO05D009842 1.1e-13 82.0 82 46.3
BcaC08g46979 Brassica carinata HOM05D005627 ORTHO05D019933 2.4e-13 80.9 183 28.4
BolC9t58939H Brassica oleracea HOM05D008838 ORTHO05D011792 5.4e-13 79.7 165 28.5
BraA09t41982Z Brassica rapa HOM05D005627 ORTHO05D011792 5.4e-13 79.7 111 36.0
BcaB06g26983 Brassica carinata HOM05D005627 ORTHO05D039808 7.1e-13 79.3 93 40.9
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 7.1e-13 79.3 180 31.7
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 1.2e-12 78.6 176 29.5
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 2.1e-12 77.8 153 32.7
BcaC03g17142 Brassica carinata HOM05D005627 ORTHO05D011976 3.5e-12 77.0 351 23.9
BolC7t41682H Brassica oleracea HOM05D005627 ORTHO05D011976 6.0e-12 76.3 176 30.1
C07p34790 Brassica napus HOM05D008838 ORTHO05D028150 7.9e-12 75.9 232 25.4
BolC4t22910H Brassica oleracea HOM05D005627 ORTHO05D011792 7.9e-12 75.9 137 29.2
BcaC06g36744 Brassica carinata HOM05D008838 ORTHO05D011792 1.0e-11 75.5 229 27.5
BolC4t26246H Brassica oleracea HOM05D008838 ORTHO05D017574 1.8e-11 74.7 147 31.3
BraA01t02617Z Brassica rapa HOM05D005627 ORTHO05D017564 1.8e-11 74.7 111 37.8
BcaC08g43119 Brassica carinata HOM05D006289 ORTHO05D027692 2.3e-11 74.3 179 36.3
A06p10200 Brassica napus HOM05D006289 ORTHO05D019882 2.3e-11 74.3 87 46.0
BNapus_Darmor_BZH_scaffold_103p00100 Brassica napus HOM05D005627 ORTHO05D017564 2.3e-11 74.3 111 37.8
BNapus_Darmor_BZH_scaffold_104p00110 Brassica napus HOM05D005627 ORTHO05D017564 2.3e-11 74.3 111 37.8
BraSC36t46108Z Brassica rapa HOM05D005627 ORTHO05D017564 2.3e-11 74.3 111 37.8
A03p68400 Brassica napus HOM05D005627 ORTHO05D017564 3.0e-11 73.9 109 37.6
C05p48960 Brassica napus HOM05D008838 ORTHO05D017578 3.0e-11 73.9 388 23.7
BcaB02g10994 Brassica carinata HOM05D005627 ORTHO05D011976 3.9e-11 73.6 142 31.7
A10p17400 Brassica napus HOM05D008838 ORTHO05D028150 6.7e-11 72.8 147 29.9
C03p52020 Brassica napus HOM05D006289 ORTHO05D032299 8.7e-11 72.4 192 30.2
BolC2t11140H Brassica oleracea HOM05D005627 ORTHO05D011976 8.7e-11 72.4 145 30.3
BolC3t17484H Brassica oleracea HOM05D006289 ORTHO05D032299 8.7e-11 72.4 192 30.2
A07p31520 Brassica napus HOM05D008838 ORTHO05D028150 1.1e-10 72.0 147 29.9
C06p03910 Brassica napus HOM05D006289 ORTHO05D027692 1.1e-10 72.0 119 40.3
BraA02t06823Z Brassica rapa HOM05D005627 ORTHO05D011792 1.1e-10 72.0 111 35.1
A03p51090 Brassica napus HOM05D008838 ORTHO05D039997 2.5e-10 70.9 146 28.8
A05p23620 Brassica napus HOM05D008838 ORTHO05D017574 2.5e-10 70.9 147 29.9
BraA05t21230Z Brassica rapa HOM05D008838 ORTHO05D017574 2.5e-10 70.9 147 29.9
BolC7t44007H Brassica oleracea HOM05D005627 ORTHO05D028150 3.3e-10 70.5 147 29.9
C05p36670 Brassica napus HOM05D008838 ORTHO05D017578 5.6e-10 69.7 390 24.1
BolC7t41413H Brassica oleracea HOM05D005627 ORTHO05D011976 5.6e-10 69.7 175 27.4
BolC9t58083H Brassica oleracea HOM05D006289 ORTHO05D018698 5.6e-10 69.7 113 35.4
C07p09750 Brassica napus HOM05D005627 ORTHO05D011976 7.4e-10 69.3 175 26.9
C09p65560 Brassica napus HOM05D006289 ORTHO05D017568 7.4e-10 69.3 110 33.6
BraA10t42593Z Brassica rapa HOM05D006289 ORTHO05D009842 7.4e-10 69.3 83 39.8
BcaB01g01859 Brassica carinata HOM05D005627 ORTHO05D013519 1.3e-09 68.6 149 31.5
BcaC06g35917 Brassica carinata HOM05D005627 ORTHO05D011976 1.3e-09 68.6 141 29.8
BraA06t25319Z Brassica rapa HOM05D005627 ORTHO05D011976 1.3e-09 68.6 145 31.0
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 1.6e-09 68.2 148 29.7
BolC8t49548H Brassica oleracea HOM05D008838 ORTHO05D011792 2.1e-09 67.8 243 27.2
BcaB02g10993 Brassica carinata HOM05D005627 ORTHO05D013519 3.7e-09 67.0 142 31.0
BcaC08g44443 Brassica carinata HOM05D008838 ORTHO05D017578 3.7e-09 67.0 388 23.2
BcaB03g15637 Brassica carinata HOM05D009418 ORTHO05D027366 4.8e-09 66.6 176 25.0
BolC7t41167H Brassica oleracea HOM05D005627 ORTHO05D011792 4.8e-09 66.6 92 33.7
BcaNung05731 Brassica carinata HOM05D005627 ORTHO05D011976 6.2e-09 66.2 115 32.2
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 6.2e-09 66.2 148 29.7
BcaC08g44170 Brassica carinata HOM05D009418 ORTHO05D017574 1.1e-08 65.5 286 24.1
BolC6t36759H Brassica oleracea HOM05D008838 ORTHO05D017574 1.1e-08 65.5 215 24.7
BcaB01g01127 Brassica carinata HOM05D006289 ORTHO05D017564 1.8e-08 64.7 100 35.0
BcaB05g23054 Brassica carinata HOM05D005627 ORTHO05D011792 2.4e-08 64.3 204 27.5
BcaC07g37194 Brassica carinata HOM05D005627 ORTHO05D011976 2.4e-08 64.3 138 28.3
C07p07500 Brassica napus HOM05D013280 ORTHO05D011792 2.4e-08 64.3 146 27.4
BcaB06g27480 Brassica carinata HOM05D008838 ORTHO05D021876 4.0e-08 63.5 153 28.8
C06p18890 Brassica napus HOM05D008838 ORTHO05D017578 4.0e-08 63.5 377 23.1
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 6.9e-08 62.8 114 32.5
BcaC05g27915 Brassica carinata HOM05D005627 ORTHO05D011792 9.0e-08 62.4 143 28.0
C07p12160 Brassica napus HOM05D005627 ORTHO05D013519 9.0e-08 62.4 142 30.3
BcaC05g27914 Brassica carinata HOM05D005627 ORTHO05D011792 2.6e-07 60.8 389 23.4
BraA07t28776Z Brassica rapa HOM05D005627 ORTHO05D017568 2.6e-07 60.8 113 32.7
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 3.4e-07 60.5 149 30.9
A09p06670 Brassica napus HOM05D006289 ORTHO05D009842 5.8e-07 59.7 82 32.9
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 7.6e-07 59.3 111 32.4
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-06 58.5 110 32.7
BcaC08g44143 Brassica carinata HOM05D008838 ORTHO05D011792 3.8e-06 57.0 175 24.6
BcaC06g35711 Brassica carinata HOM05D008838 ORTHO05D039997 4.9e-06 56.6 192 24.5
BcaC05g27687 Brassica carinata HOM05D005627 ORTHO05D021837 8.4e-06 55.8 109 28.4
A03p31870 Brassica napus HOM05D005627 ORTHO05D027884 8.4e-06 55.8 105 29.5
BraA04t18196Z Brassica rapa HOM05D005627 ORTHO05D027884 8.4e-06 55.8 105 29.5
BraA06t24543Z Brassica rapa HOM05D005627 ORTHO05D027884 8.4e-06 55.8 105 29.5


User provided reference genes

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