Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14365 Brassica carinata HOM05D011670 ORTHO05D027274 4.8e-58 227.6 116 100.0
BcaC01g00485 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-34 147.1 116 67.2
A10p14470 Brassica napus HOM05D011670 ORTHO05D027274 4.7e-13 78.2 114 47.4
BraA10t43537Z Brassica rapa HOM05D011670 ORTHO05D027274 1.5e-11 73.2 69 60.9
C05p15940 Brassica napus HOM05D009238 ORTHO05D021611 1.6e-08 63.2 74 48.6
C04p60320 Brassica napus HOM05D011670 ORTHO05D027357 2.0e-08 62.8 71 50.7
C05p09640 Brassica napus HOM05D011670 ORTHO05D027357 2.0e-08 62.8 71 50.7
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 2.0e-08 62.8 46 67.4
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 3.5e-08 62.0 47 59.6
C05p23240 Brassica napus HOM05D009238 ORTHO05D021611 4.5e-08 61.6 74 47.3
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 1.0e-07 60.5 46 65.2
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 1.0e-07 60.5 46 65.2
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 2.3e-07 59.3 46 65.2
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 2.3e-07 59.3 51 54.9
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 2.9e-07 58.9 47 61.7
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 2.9e-07 58.9 47 61.7
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 3.8e-07 58.5 46 63.0
C03p31480 Brassica napus HOM05D009238 ORTHO05D021611 3.8e-07 58.5 74 45.9
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 5.0e-07 58.2 63 46.0
C06p11850 Brassica napus HOM05D009238 ORTHO05D012489 5.0e-07 58.2 75 42.7
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-07 57.8 49 57.1
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 6.6e-07 57.8 63 44.4
A02p36830 Brassica napus HOM05D009238 ORTHO05D012489 8.6e-07 57.4 75 42.7
BraA02t08674Z Brassica rapa HOM05D009238 ORTHO05D012489 8.6e-07 57.4 75 42.7
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 1.5e-06 56.6 75 42.7
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 1.9e-06 56.2 63 44.4
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 1.9e-06 56.2 46 60.9
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 1.9e-06 56.2 74 43.2
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 1.9e-06 56.2 71 46.5
C02p60610 Brassica napus HOM05D016815 ORTHO05D020093 1.9e-06 56.2 72 44.4
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 1.9e-06 56.2 74 43.2
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 1.9e-06 56.2 74 43.2
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 3.3e-06 55.5 47 57.4
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 3.3e-06 55.5 75 44.0
BcaC02g08196 Brassica carinata HOM05D009238 ORTHO05D011709 3.3e-06 55.5 47 59.6
BcaC02g10496 Brassica carinata HOM05D011670 ORTHO05D012489 3.3e-06 55.5 47 57.4
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 3.3e-06 55.5 55 47.3
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 3.3e-06 55.5 55 47.3
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 3.3e-06 55.5 98 36.7
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 4.2e-06 55.1 51 47.1
BolC9t57963H Brassica oleracea HOM05D011670 ORTHO05D020093 5.5e-06 54.7 46 58.7
C07p04310 Brassica napus HOM05D001239 ORTHO05D011709 7.2e-06 54.3 83 39.8
BcaC03g18002 Brassica carinata HOM05D016815 ORTHO05D020093 9.5e-06 53.9 47 53.2
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 9.5e-06 53.9 72 47.2
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 9.5e-06 53.9 58 44.8
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 9.5e-06 53.9 58 44.8
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 9.5e-06 53.9 72 47.2
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 9.5e-06 53.9 46 56.5


User provided reference genes

Program Settings