Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14161 Brassica carinata HOM05D000493 ORTHO05D094244 3.1e-90 335.1 171 100.0
BcaB03g14159 Brassica carinata HOM05D000493 ORTHO05D018702 2.1e-22 109.8 56 100.0
BcaB04g17384 Brassica carinata HOM05D000493 ORTHO05D018702 6.9e-21 104.8 56 94.6
A03p55460 Brassica napus HOM05D000493 ORTHO05D018702 2.5e-10 69.7 43 81.4
BraA01t02407Z Brassica rapa HOM05D000001 ORTHO05D000003 2.5e-10 69.7 43 81.4
BcaB04g21131 Brassica carinata HOM05D000493 ORTHO05D001638 3.2e-10 69.3 44 86.4
BcaC04g22453 Brassica carinata HOM05D000493 ORTHO05D018702 3.2e-10 69.3 56 69.6
BcaB05g24910 Brassica carinata HOM05D000493 ORTHO05D018702 4.2e-10 68.9 35 97.1
BcaB04g18645 Brassica carinata HOM05D000493 ORTHO05D001638 1.6e-09 67.0 43 76.7
BraA01t04179Z Brassica rapa HOM05D000493 ORTHO05D001638 2.7e-09 66.2 43 83.7
Thhalv10020791m.g Eutrema salsugineum HOM05D000493 ORTHO05D001638 7.9e-09 64.7 43 81.4
Aa31LG3G4920 Aethionema arabicum HOM05D000493 ORTHO05D001638 1.0e-08 64.3 43 81.4
BcaC09g48176 Brassica carinata HOM05D000493 ORTHO05D001638 1.0e-08 64.3 43 81.4
BolC1t05311H Brassica oleracea HOM05D000493 ORTHO05D001638 1.0e-08 64.3 43 81.4
CARHR086070 Cardamine hirsuta HOM05D000493 ORTHO05D001638 3.9e-08 62.4 43 79.1
Sp3g09760 Schrenkiella parvula HOM05D000493 ORTHO05D001638 5.1e-08 62.0 43 76.7
A03p02580 Brassica napus HOM05D000493 ORTHO05D001638 8.7e-08 61.2 58 62.1
C09p19160 Brassica napus HOM05D000493 ORTHO05D018702 8.7e-08 61.2 38 81.6
BNapus_Darmor_BZH_scaffold_145p00140 Brassica napus HOM05D000493 ORTHO05D001638 1.1e-07 60.8 43 76.7
AL3G23070 Arabidopsis lyrata HOM05D000493 ORTHO05D001638 1.5e-07 60.5 43 76.7
Carub.0003s1084 Capsella rubella HOM05D000493 ORTHO05D001638 1.9e-07 60.1 43 76.7
BraA02t04871Z Brassica rapa HOM05D000493 ORTHO05D001638 2.5e-07 59.7 58 60.3
BraA03t09619Z Brassica rapa HOM05D000493 ORTHO05D001638 2.5e-07 59.7 48 68.8
BcaB05g21681 Brassica carinata HOM05D000493 ORTHO05D005823 4.3e-07 58.9 60 58.3
C02p02600 Brassica napus HOM05D000493 ORTHO05D005823 4.3e-07 58.9 60 58.3
BolC2t06226H Brassica oleracea HOM05D000493 ORTHO05D005823 4.3e-07 58.9 60 58.3
Thhalv10013556m.g Eutrema salsugineum HOM05D000493 ORTHO05D001638 4.3e-07 58.9 58 58.6
Carub.0006s0503 Capsella rubella HOM05D000493 ORTHO05D001638 5.7e-07 58.5 58 58.6
AL6G16120 Arabidopsis lyrata HOM05D000493 ORTHO05D001638 9.7e-07 57.8 60 56.7
AT5G06150 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 9.7e-07 57.8 60 55.0
THA.LOC104816598 Tarenaya hassleriana HOM05D000493 ORTHO05D001638 9.7e-07 57.8 50 62.0
BolC3t12847H Brassica oleracea HOM05D000493 ORTHO05D001638 1.3e-06 57.4 48 64.6
BcaB01g05977 Brassica carinata HOM05D000493 ORTHO05D001638 1.6e-06 57.0 49 63.3
C03p02920 Brassica napus HOM05D000493 ORTHO05D001638 1.6e-06 57.0 49 63.3
THA.LOC104809968 Tarenaya hassleriana HOM05D000493 ORTHO05D001638 1.6e-06 57.0 50 64.0
AT3G11520 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 2.2e-06 56.6 42 73.8
BcaB01g05737 Brassica carinata HOM05D000493 ORTHO05D001638 2.2e-06 56.6 45 66.7
Sp6g36740 Schrenkiella parvula HOM05D000493 ORTHO05D001638 3.7e-06 55.8 58 53.4
AT1G34460 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 4.8e-06 55.5 45 66.7
Aa31LG11G7130 Aethionema arabicum HOM05D000493 ORTHO05D001638 8.2e-06 54.7 48 62.5
AT4G37490 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 8.2e-06 54.7 58 55.2


User provided reference genes

Program Settings