Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14159 Brassica carinata HOM05D000493 ORTHO05D018702 9.4e-50 199.9 102 100.0
BcaB03g14161 Brassica carinata HOM05D000493 ORTHO05D094244 1.3e-22 109.8 56 100.0
BcaB04g17384 Brassica carinata HOM05D000493 ORTHO05D018702 4.1e-21 104.8 56 94.6
BcaB05g24910 Brassica carinata HOM05D000493 ORTHO05D018702 1.1e-18 96.7 50 98.0
BraA01t02407Z Brassica rapa HOM05D000001 ORTHO05D000003 3.9e-11 71.6 52 71.2
BcaC04g22453 Brassica carinata HOM05D000493 ORTHO05D018702 5.0e-11 71.2 65 63.1
A03p55460 Brassica napus HOM05D000493 ORTHO05D018702 6.6e-11 70.9 44 81.8
BcaB04g21131 Brassica carinata HOM05D000493 ORTHO05D001638 2.5e-10 68.9 44 86.4
BcaB04g18645 Brassica carinata HOM05D000493 ORTHO05D001638 1.2e-09 66.6 43 76.7
BraA01t04179Z Brassica rapa HOM05D000493 ORTHO05D001638 1.6e-09 66.2 43 83.7
Thhalv10020791m.g Eutrema salsugineum HOM05D000493 ORTHO05D001638 4.7e-09 64.7 43 81.4
Aa31LG3G4920 Aethionema arabicum HOM05D000493 ORTHO05D001638 6.2e-09 64.3 43 81.4
BcaC09g48176 Brassica carinata HOM05D000493 ORTHO05D001638 6.2e-09 64.3 43 81.4
BolC1t05311H Brassica oleracea HOM05D000493 ORTHO05D001638 6.2e-09 64.3 43 81.4
C09p19160 Brassica napus HOM05D000493 ORTHO05D018702 1.4e-08 63.2 47 70.2
CARHR086070 Cardamine hirsuta HOM05D000493 ORTHO05D001638 2.3e-08 62.4 43 79.1
Sp3g09760 Schrenkiella parvula HOM05D000493 ORTHO05D001638 3.1e-08 62.0 43 76.7
A03p02580 Brassica napus HOM05D000493 ORTHO05D001638 6.8e-08 60.8 58 62.1
AL3G23070 Arabidopsis lyrata HOM05D000493 ORTHO05D001638 8.9e-08 60.5 43 76.7
BNapus_Darmor_BZH_scaffold_145p00140 Brassica napus HOM05D000493 ORTHO05D001638 8.9e-08 60.5 43 76.7
Carub.0003s1084 Capsella rubella HOM05D000493 ORTHO05D001638 1.2e-07 60.1 43 76.7
BraA02t04871Z Brassica rapa HOM05D000493 ORTHO05D001638 2.0e-07 59.3 58 60.3
BraA03t09619Z Brassica rapa HOM05D000493 ORTHO05D001638 2.0e-07 59.3 48 68.8
BcaB05g21681 Brassica carinata HOM05D000493 ORTHO05D005823 3.4e-07 58.5 60 58.3
C02p02600 Brassica napus HOM05D000493 ORTHO05D005823 3.4e-07 58.5 60 58.3
BolC2t06226H Brassica oleracea HOM05D000493 ORTHO05D005823 3.4e-07 58.5 60 58.3
Thhalv10013556m.g Eutrema salsugineum HOM05D000493 ORTHO05D001638 3.4e-07 58.5 58 58.6
Carub.0006s0503 Capsella rubella HOM05D000493 ORTHO05D001638 4.4e-07 58.2 58 58.6
AL6G16120 Arabidopsis lyrata HOM05D000493 ORTHO05D001638 7.5e-07 57.4 60 56.7
AT5G06150 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 7.5e-07 57.4 60 55.0
THA.LOC104816598 Tarenaya hassleriana HOM05D000493 ORTHO05D001638 7.5e-07 57.4 50 62.0
BolC3t12847H Brassica oleracea HOM05D000493 ORTHO05D001638 9.8e-07 57.0 48 64.6
BcaB01g05977 Brassica carinata HOM05D000493 ORTHO05D001638 1.3e-06 56.6 49 63.3
C03p02920 Brassica napus HOM05D000493 ORTHO05D001638 1.3e-06 56.6 49 63.3
THA.LOC104809968 Tarenaya hassleriana HOM05D000493 ORTHO05D001638 1.3e-06 56.6 50 64.0
AT3G11520 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 1.7e-06 56.2 42 73.8
BcaB01g05737 Brassica carinata HOM05D000493 ORTHO05D001638 1.7e-06 56.2 45 66.7
AT1G34460 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 2.9e-06 55.5 45 66.7
Sp6g36740 Schrenkiella parvula HOM05D000493 ORTHO05D001638 2.9e-06 55.5 58 53.4
AT4G37490 Arabidopsis thaliana HOM05D000493 ORTHO05D001638 4.9e-06 54.7 58 55.2
Aa31LG11G7130 Aethionema arabicum HOM05D000493 ORTHO05D001638 6.4e-06 54.3 48 62.5
PGR142G0214 Punica granatum HOM05D000493 ORTHO05D001638 8.3e-06 53.9 61 54.1


User provided reference genes

Program Settings