Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14146 Brassica carinata HOM05D000197 ORTHO05D000114 2.5e-39 164.9 77 100.0
AL1G27010 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.8e-29 132.1 77 79.2
Carub.0001s1472 Capsella rubella HOM05D000197 ORTHO05D000114 5.3e-29 130.6 77 76.6
AL1G27000 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.2e-28 129.4 77 76.6
AL1G26980 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.5e-28 129.0 77 76.6
AT1G14950 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 2.6e-28 128.3 77 75.3
AT1G14930 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 3.4e-28 127.9 77 75.3
CARHR015480 Cardamine hirsuta HOM05D000197 ORTHO05D000114 5.8e-28 127.1 77 75.3
Carub.0001s1471 Capsella rubella HOM05D000197 ORTHO05D000114 7.6e-28 126.7 77 72.7
AT1G14940 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 2.9e-27 124.8 77 72.7
CARHR015470 Cardamine hirsuta HOM05D000197 ORTHO05D000114 3.8e-27 124.4 77 71.4
Aa31LG2G8380 Aethionema arabicum HOM05D000197 ORTHO05D000114 1.2e-25 119.4 71 77.5
Aa31LG2G8390 Aethionema arabicum HOM05D000197 ORTHO05D000114 1.2e-25 119.4 71 77.5
BcaC07g41521 Brassica carinata HOM05D000197 ORTHO05D000114 2.1e-25 118.6 75 69.3
BolC8t52078H Brassica oleracea HOM05D000197 ORTHO05D000114 2.1e-25 118.6 75 69.3
Thhalv10005071m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 8.7e-24 113.2 71 73.2
BcaC09g50956 Brassica carinata HOM05D000197 ORTHO05D000114 1.5e-23 112.5 70 68.6
C01p18830 Brassica napus HOM05D000197 ORTHO05D000114 1.5e-23 112.5 70 68.6
BolC1t01810H Brassica oleracea HOM05D000197 ORTHO05D000114 1.5e-23 112.5 70 68.6
BcaC06g34157 Brassica carinata HOM05D000197 ORTHO05D000114 1.9e-23 112.1 71 73.2
C07p32090 Brassica napus HOM05D000197 ORTHO05D000114 1.9e-23 112.1 71 73.2
Thhalv10005073m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 1.9e-23 112.1 71 71.8
BcaC05g25102 Brassica carinata HOM05D000197 ORTHO05D000114 2.5e-23 111.7 74 66.2
Thhalv10005076m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 2.5e-23 111.7 71 73.2
Thhalv10026372m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 2.5e-23 111.7 69 69.6
BolC7t43748H Brassica oleracea HOM05D000197 ORTHO05D000114 7.4e-23 110.2 71 71.8
BraA06t24277Z Brassica rapa HOM05D000197 ORTHO05D000114 9.6e-23 109.8 73 64.4
CARHR231040 Cardamine hirsuta HOM05D000197 ORTHO05D000114 9.6e-23 109.8 69 69.6
C03p80480 Brassica napus HOM05D000197 ORTHO05D000114 1.3e-22 109.4 69 68.1
Carub.0005s0049 Capsella rubella HOM05D000197 ORTHO05D000114 1.3e-22 109.4 71 71.8
CARHR231050 Cardamine hirsuta HOM05D000197 ORTHO05D000114 1.3e-22 109.4 71 64.8
BcaC06g31295 Brassica carinata HOM05D000949 ORTHO05D000114 2.1e-22 108.6 69 72.5
C08p45300 Brassica napus HOM05D000197 ORTHO05D000114 2.1e-22 108.6 86 59.3
THA.LOC104823801 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 2.1e-22 108.6 70 70.0
THA.LOC104824137 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 2.1e-22 108.6 70 71.4
A06p10980 Brassica napus HOM05D000197 ORTHO05D000114 2.8e-22 108.2 71 64.8
CARHR144080 Cardamine hirsuta HOM05D000197 ORTHO05D000114 2.8e-22 108.2 71 69.0
AL5G13150 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 3.7e-22 107.8 71 69.0
AT2G01520 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 3.7e-22 107.8 71 69.0
A08p21960 Brassica napus HOM05D000197 ORTHO05D000114 3.7e-22 107.8 69 66.7
BolC3t20294H Brassica oleracea HOM05D000197 ORTHO05D000114 4.8e-22 107.5 69 66.7
AL1G27020 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 6.3e-22 107.1 73 61.6
AL7G29680 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 6.3e-22 107.1 69 66.7
A06p44360 Brassica napus HOM05D000197 ORTHO05D000114 8.2e-22 106.7 71 69.0
BraA06t27311Z Brassica rapa HOM05D000197 ORTHO05D000114 8.2e-22 106.7 71 69.0
AL5G10520 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.1e-21 106.3 71 67.6
BcaC03g17050 Brassica carinata HOM05D000197 ORTHO05D000114 1.1e-21 106.3 70 67.1
BcaC09g48106 Brassica carinata HOM05D000197 ORTHO05D000114 1.1e-21 106.3 70 64.3
A02p32140 Brassica napus HOM05D000197 ORTHO05D000114 1.1e-21 106.3 70 67.1
C02p49690 Brassica napus HOM05D000197 ORTHO05D000114 1.1e-21 106.3 70 67.1
BolC1t05413H Brassica oleracea HOM05D000197 ORTHO05D000114 1.1e-21 106.3 70 64.3
BolC2t11049H Brassica oleracea HOM05D000197 ORTHO05D000114 1.1e-21 106.3 70 67.1
BolC2t11050H Brassica oleracea HOM05D000197 ORTHO05D000114 1.1e-21 106.3 70 67.1
BraA02t08227Z Brassica rapa HOM05D000197 ORTHO05D000114 1.1e-21 106.3 70 67.1
AT1G14960 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 1.4e-21 105.9 73 60.3
BraA08t34148Z Brassica rapa HOM05D000197 ORTHO05D000114 1.8e-21 105.5 69 65.2
C05p13030 Brassica napus HOM05D000197 ORTHO05D000114 3.1e-21 104.8 73 61.6
BcaB07g30391 Brassica carinata HOM05D000197 ORTHO05D000114 5.3e-21 104.0 70 65.7
BcaNung01075 Brassica carinata HOM05D000197 ORTHO05D000114 5.3e-21 104.0 71 62.0
A01p14970 Brassica napus HOM05D000197 ORTHO05D000114 5.3e-21 104.0 71 62.0
C01p18770 Brassica napus HOM05D000197 ORTHO05D000114 5.3e-21 104.0 71 62.0
BolC1t01807H Brassica oleracea HOM05D000197 ORTHO05D000114 5.3e-21 104.0 71 62.0
BraA01t01438Z Brassica rapa HOM05D000197 ORTHO05D000114 5.3e-21 104.0 71 62.0
Aa31LG2G8370 Aethionema arabicum HOM05D000197 ORTHO05D000114 6.9e-21 103.6 72 63.9
Thhalv10026489m.g Eutrema salsugineum HOM05D000197 ORTHO05D000114 6.9e-21 103.6 71 62.0
BcaB07g30738 Brassica carinata HOM05D000197 ORTHO05D000114 9.0e-21 103.2 71 64.8
Carub.0007s1744 Capsella rubella HOM05D000197 ORTHO05D000114 9.0e-21 103.2 69 68.1
BcaC09g50959 Brassica carinata HOM05D003744 ORTHO05D004327 2.0e-20 102.1 69 60.9
C01p18840 Brassica napus HOM05D000197 ORTHO05D000114 2.0e-20 102.1 70 60.0
BcaB07g30736 Brassica carinata HOM05D000197 ORTHO05D000114 3.4e-20 101.3 70 62.9
A01p41970 Brassica napus HOM05D000197 ORTHO05D000114 3.4e-20 101.3 69 62.3
BraA01t04264Z Brassica rapa HOM05D000197 ORTHO05D000114 3.4e-20 101.3 69 62.3
AT2G01530 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 5.9e-20 100.5 71 60.6
AL7G42370 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.0e-19 99.8 71 66.2
AT4G23680 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 1.3e-19 99.4 69 63.8
BcaC09g50958 Brassica carinata HOM05D000197 ORTHO05D000114 1.3e-19 99.4 69 62.3
BolC1t01809H Brassica oleracea HOM05D000197 ORTHO05D000114 1.3e-19 99.4 69 62.3
CARHR231070 Cardamine hirsuta HOM05D000197 ORTHO05D000114 1.7e-19 99.0 69 62.3
Sp7g21600 Schrenkiella parvula HOM05D000197 ORTHO05D000114 1.7e-19 99.0 69 60.9
BcaNung01076 Brassica carinata HOM05D000197 ORTHO05D000114 3.8e-19 97.8 68 57.4
A09p23460 Brassica napus HOM05D000197 ORTHO05D000114 6.5e-19 97.1 70 60.0
C09p30250 Brassica napus HOM05D000197 ORTHO05D000114 6.5e-19 97.1 70 60.0
BolC9t55889H Brassica oleracea HOM05D000197 ORTHO05D000114 6.5e-19 97.1 70 60.0
BraA09t37946Z Brassica rapa HOM05D000197 ORTHO05D000114 6.5e-19 97.1 70 60.0
BcaC04g21575 Brassica carinata HOM05D000197 ORTHO05D000114 8.5e-19 96.7 70 60.0
AL5G10550 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.1e-18 96.3 71 57.7
AT4G14060 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 1.1e-18 96.3 71 63.4
A03p54650 Brassica napus HOM05D000197 ORTHO05D000114 1.9e-18 95.5 69 53.6
BraA03t14532Z Brassica rapa HOM05D000197 ORTHO05D000114 1.9e-18 95.5 69 53.6
AT3G26450 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 5.5e-18 94.0 69 56.5
AL5G15240 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 9.3e-18 93.2 65 58.5
Sp7g21610 Schrenkiella parvula HOM05D000197 ORTHO05D000114 9.3e-18 93.2 62 61.3
BolC7t45797H Brassica oleracea HOM05D000197 ORTHO05D000114 1.2e-17 92.8 66 54.5
AT3G26460 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 2.7e-17 91.7 65 56.9
AT4G23670 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 2.7e-17 91.7 69 53.6
AL1G45410 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.0e-16 89.7 73 52.1
C07p52970 Brassica napus HOM05D000197 ORTHO05D000114 1.0e-16 89.7 62 54.8
AL7G29690 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 1.8e-16 89.0 69 53.6
Carub.0007s1745 Capsella rubella HOM05D000197 ORTHO05D000114 3.0e-16 88.2 69 53.6
Carub.0005s0443 Capsella rubella HOM05D000197 ORTHO05D000114 3.9e-16 87.8 65 52.3
Carub.0005s0446 Capsella rubella HOM05D000197 ORTHO05D000114 1.1e-15 86.3 65 53.8
Carub.0005s0445 Capsella rubella HOM05D000197 ORTHO05D000114 1.5e-15 85.9 65 53.8
AT1G30990 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 4.3e-15 84.3 73 53.4
BcaNung03440 Brassica carinata HOM05D000197 ORTHO05D000114 4.3e-15 84.3 69 50.7
C07p52960 Brassica napus HOM05D000197 ORTHO05D000114 4.3e-15 84.3 69 50.7
BolC7t45795H Brassica oleracea HOM05D000197 ORTHO05D000114 4.3e-15 84.3 69 50.7
A03p54640 Brassica napus HOM05D000197 ORTHO05D000114 5.7e-15 84.0 69 49.3
BraA03t14531Z Brassica rapa HOM05D000197 ORTHO05D000114 5.7e-15 84.0 69 49.3
A01p41980 Brassica napus HOM05D000197 ORTHO05D000114 7.4e-15 83.6 71 50.7
BraA01t04266Z Brassica rapa HOM05D000197 ORTHO05D000114 7.4e-15 83.6 71 50.7
CARHR147290 Cardamine hirsuta HOM05D000197 ORTHO05D000114 7.4e-15 83.6 69 53.6
Carub.0005s0444 Capsella rubella HOM05D000197 ORTHO05D000114 9.7e-15 83.2 65 52.3
BcaC09g48107 Brassica carinata HOM05D000197 ORTHO05D000114 1.6e-14 82.4 71 49.3
BolC1t05414H Brassica oleracea HOM05D000197 ORTHO05D000114 1.6e-14 82.4 71 49.3
C03p80390 Brassica napus HOM05D000197 ORTHO05D000114 1.2e-12 76.3 69 44.9
BolC1t01811H Brassica oleracea HOM05D000197 ORTHO05D000114 1.2e-12 76.3 70 48.6
BolC3t20287H Brassica oleracea HOM05D000197 ORTHO05D000114 1.2e-12 76.3 69 44.9
BcaB03g12405 Brassica carinata HOM05D003744 ORTHO05D004327 3.4e-12 74.7 46 63.0
Carub.0001s1473 Capsella rubella HOM05D000197 ORTHO05D000114 7.7e-12 73.6 69 46.4
BcaC05g25426 Brassica carinata HOM05D000197 ORTHO05D000114 1.0e-11 73.2 44 68.2
C05p13020 Brassica napus HOM05D000197 ORTHO05D000114 1.0e-11 73.2 44 68.2
BolC5t30047H Brassica oleracea HOM05D000197 ORTHO05D000114 1.0e-11 73.2 44 68.2
THA.LOC104823795 Tarenaya hassleriana HOM05D000197 ORTHO05D000114 1.0e-11 73.2 74 45.9
BcaC05g25427 Brassica carinata HOM05D000197 ORTHO05D000114 5.5e-10 67.4 46 60.9
COL.COLO4_25084 Corchorus olitorius HOM05D000197 ORTHO05D000114 4.6e-09 64.3 69 36.2
Thecc.02G284300 Theobroma cacao HOM05D000197 ORTHO05D000114 7.9e-09 63.5 70 40.0
MD16G1024400 Malus domestica HOM05D000197 ORTHO05D000114 5.1e-08 60.8 63 46.0
MD16G1025300 Malus domestica HOM05D000197 ORTHO05D000114 5.1e-08 60.8 63 46.0
FvH4_4g32731 Fragaria vesca HOM05D000197 ORTHO05D000114 1.5e-07 59.3 69 40.6
FAN12G3177 Fragaria x ananassa HOM05D000197 ORTHO05D000114 1.5e-07 59.3 69 40.6
vmacro00407 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 2.0e-07 58.9 64 48.4
CiPaw.05G195500 Carya illinoinensis HOM05D000197 ORTHO05D000114 2.6e-07 58.5 71 42.3
MD16G1024700 Malus domestica HOM05D000197 ORTHO05D000114 2.6e-07 58.5 63 42.9
MD16G1025600 Malus domestica HOM05D000197 ORTHO05D000114 3.3e-07 58.2 63 42.9
PGR119G1904 Punica granatum HOM05D000197 ORTHO05D000114 3.3e-07 58.2 68 45.6
Atru.chr11.716 Acer truncatum HOM05D000197 ORTHO05D000114 4.4e-07 57.8 69 40.6
COL.COLO4_13150 Corchorus olitorius HOM05D000197 ORTHO05D000114 4.4e-07 57.8 65 35.4
CiPaw.05G195400 Carya illinoinensis HOM05D000197 ORTHO05D000114 7.4e-07 57.0 70 40.0
Prupe.1G328200 Prunus persica HOM05D000197 ORTHO05D000114 7.4e-07 57.0 62 38.7
Eucgr.G02170 Eucalyptus grandis HOM05D000197 ORTHO05D000114 9.7e-07 56.6 69 40.6
MD16G1026000 Malus domestica HOM05D000197 ORTHO05D000114 9.7e-07 56.6 63 39.7
Eucgr.B02918 Eucalyptus grandis HOM05D000197 ORTHO05D000114 1.3e-06 56.2 68 41.2
FAN22G0586 Fragaria x ananassa HOM05D000197 ORTHO05D000114 1.3e-06 56.2 69 37.7
Haze_10969 Corylus avellana HOM05D000197 ORTHO05D000114 1.7e-06 55.8 69 39.1
CSS0017343 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 2.2e-06 55.5 57 45.6
CSS0023020 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 2.2e-06 55.5 75 33.3
MELO3C015002.2 Cucumis melo HOM05D000197 ORTHO05D000114 2.2e-06 55.5 68 36.8
PGR119G0513 Punica granatum HOM05D000197 ORTHO05D000114 2.2e-06 55.5 69 37.7
FAN22G2382 Fragaria x ananassa HOM05D000197 ORTHO05D000114 2.8e-06 55.1 70 35.7
PGR102G1869 Punica granatum HOM05D000197 ORTHO05D000114 2.8e-06 55.1 68 41.2
Eucgr.B02915 Eucalyptus grandis HOM05D000197 ORTHO05D000114 3.7e-06 54.7 64 43.8
Potri.008G131300 Populus trichocarpa HOM05D000197 ORTHO05D000114 3.7e-06 54.7 70 37.1
Prupe.1G327600 Prunus persica HOM05D000197 ORTHO05D000114 3.7e-06 54.7 63 39.7
PGR042G3838 Punica granatum HOM05D000197 ORTHO05D000114 3.7e-06 54.7 70 30.0
FvH4_4g32720 Fragaria vesca HOM05D000197 ORTHO05D000114 4.8e-06 54.3 70 37.1
FAN12G1358 Fragaria x ananassa HOM05D000197 ORTHO05D000114 4.8e-06 54.3 70 37.1
PGR042G1814 Punica granatum HOM05D000197 ORTHO05D000114 4.8e-06 54.3 71 38.0
PGR102G1085 Punica granatum HOM05D000197 ORTHO05D000114 4.8e-06 54.3 70 37.1
Eucgr.G02177 Eucalyptus grandis HOM05D000197 ORTHO05D000114 6.3e-06 53.9 70 40.0
Eucgr.G02172 Eucalyptus grandis HOM05D000197 ORTHO05D000114 8.2e-06 53.5 69 39.1
Eucgr.G02176 Eucalyptus grandis HOM05D000197 ORTHO05D000114 8.2e-06 53.5 70 37.1
Eucgr.L02425 Eucalyptus grandis HOM05D000197 ORTHO05D000114 8.2e-06 53.5 69 40.6


User provided reference genes

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